Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22k08
(418 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55374-1|AAP82639.1| 392|Caenorhabditis elegans Hypothetical pr... 29 1.4
U23484-1|AAC46766.2| 459|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z50177-1|CAA90543.2| 607|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical p... 27 5.5
Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical p... 27 5.5
Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical pr... 27 5.5
U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein. 27 5.5
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical... 27 5.5
AC024799-1|AAK72316.1| 349|Caenorhabditis elegans Serpentine re... 27 5.5
Z75547-5|CAA99899.1| 207|Caenorhabditis elegans Hypothetical pr... 27 7.2
U46675-3|AAB52643.1| 375|Caenorhabditis elegans Activated in bl... 27 7.2
AL021176-3|CAA15976.2| 316|Caenorhabditis elegans Hypothetical ... 26 9.5
>U55374-1|AAP82639.1| 392|Caenorhabditis elegans Hypothetical
protein T02C5.1b protein.
Length = 392
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 196 ELPIEDTGCSAHHLTQLSSHRRSYDLLSQSLHVVYIS 86
ELPI+D +L + S+ +YD+ SL VY S
Sbjct: 121 ELPIKDNFIKGENLEMIDSNEINYDMARNSLEDVYDS 157
>U23484-1|AAC46766.2| 459|Caenorhabditis elegans Hypothetical
protein EEED8.6 protein.
Length = 459
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 191 EFGRYPNYHPGYDIQDAKRRSSKLIVEDIPRDPVQGSK 304
E +YP +H +Q ++R LI D D QGSK
Sbjct: 157 ESRKYPFFHRDLLVQTVQKRRVDLITIDATPDTFQGSK 194
>Z50177-1|CAA90543.2| 607|Caenorhabditis elegans Hypothetical
protein F46G10.2 protein.
Length = 607
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 180 ILAALRTILLNCPATGEATIC 118
+LA L T+L PATG T+C
Sbjct: 23 MLAVLTTVLFLAPATGADTVC 43
>Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 27.1 bits (57), Expect = 5.5
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 273 TFPVIPFRAARTTVHMRPKNWV 338
T P++P A VH P +W+
Sbjct: 539 TIPIVPLSAPPKAVHQSPSSWI 560
>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 27.1 bits (57), Expect = 5.5
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 273 TFPVIPFRAARTTVHMRPKNWV 338
T P++P A VH P +W+
Sbjct: 539 TIPIVPLSAPPKAVHQSPSSWI 560
>Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 27.1 bits (57), Expect = 5.5
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 273 TFPVIPFRAARTTVHMRPKNWV 338
T P++P A VH P +W+
Sbjct: 542 TIPIVPLSAPPKAVHQSPSSWI 563
>Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 27.1 bits (57), Expect = 5.5
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 273 TFPVIPFRAARTTVHMRPKNWV 338
T P++P A VH P +W+
Sbjct: 539 TIPIVPLSAPPKAVHQSPSSWI 560
>Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 27.1 bits (57), Expect = 5.5
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 273 TFPVIPFRAARTTVHMRPKNWV 338
T P++P A VH P +W+
Sbjct: 539 TIPIVPLSAPPKAVHQSPSSWI 560
>Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 27.1 bits (57), Expect = 5.5
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 273 TFPVIPFRAARTTVHMRPKNWV 338
T P++P A VH P +W+
Sbjct: 539 TIPIVPLSAPPKAVHQSPSSWI 560
>Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 27.1 bits (57), Expect = 5.5
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 273 TFPVIPFRAARTTVHMRPKNWV 338
T P++P A VH P +W+
Sbjct: 542 TIPIVPLSAPPKAVHQSPSSWI 563
>Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 27.1 bits (57), Expect = 5.5
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 273 TFPVIPFRAARTTVHMRPKNWV 338
T P++P A VH P +W+
Sbjct: 539 TIPIVPLSAPPKAVHQSPSSWI 560
>U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.
Length = 1016
Score = 27.1 bits (57), Expect = 5.5
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 273 TFPVIPFRAARTTVHMRPKNWV 338
T P++P A VH P +W+
Sbjct: 539 TIPIVPLSAPPKAVHQSPSSWI 560
>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
protein Y66D12A.14 protein.
Length = 2870
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -2
Query: 201 LPNSLLKILAALRTILLNCP 142
LPNSL L+++ T LLNCP
Sbjct: 2581 LPNSLESDLSSIWTSLLNCP 2600
>AC024799-1|AAK72316.1| 349|Caenorhabditis elegans Serpentine
receptor, class x protein4 protein.
Length = 349
Score = 27.1 bits (57), Expect = 5.5
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = -1
Query: 418 FFFCF*NLSIGMFRCIVSKSCNWFVVMTQFFGLICTVVLAALNGITGNVLNNQF*RASFS 239
F+ C +L + I + WFV++ F+ L CT G V N + S
Sbjct: 234 FYICAWSLFRILPLIIANHGIEWFVLIPMFYTLNCTSNAIIYLGFNSEVQENLKPQKLQS 293
Query: 238 ILNIVSRM 215
IL I+ M
Sbjct: 294 ILRILKFM 301
>Z75547-5|CAA99899.1| 207|Caenorhabditis elegans Hypothetical
protein R11D1.4 protein.
Length = 207
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 192 SLLKILAALRTILLNCPATGEATI 121
+L +L LRT L+NC A+G+A +
Sbjct: 123 NLAGLLQKLRTSLINCKASGDAKL 146
>U46675-3|AAB52643.1| 375|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 10 protein.
Length = 375
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = -3
Query: 335 PVFRPHMYCCSCCPERDHGECPQQSVL 255
P R CSC P + C QQS +
Sbjct: 19 PTLREKRQACSCAPVQQQPSCCQQSTI 45
>AL021176-3|CAA15976.2| 316|Caenorhabditis elegans Hypothetical
protein Y43E12A.3 protein.
Length = 316
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 315 HMRPKNWVMTTNQLHDLETIQRNIPIDK 398
H+ PK W+ ++ + E IQR + I K
Sbjct: 211 HLPPKQWIKESDLVEQFEHIQRILRIGK 238
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,172,023
Number of Sequences: 27780
Number of extensions: 179779
Number of successful extensions: 519
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 519
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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