BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22k05
(693 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC114929-1|AAI14930.1| 1038|Homo sapiens importin 7 protein. 64 5e-10
AL137335-1|CAB70698.1| 208|Homo sapiens hypothetical protein pr... 64 5e-10
AJ295844-1|CAC17609.1| 1010|Homo sapiens importin7 protein. 64 5e-10
AF098799-1|AAC68903.1| 1038|Homo sapiens RanBP7/importin 7 protein. 64 5e-10
U77494-1|AAB67052.1| 1037|Homo sapiens RANBP8 protein. 44 5e-04
AB209602-1|BAD92839.1| 485|Homo sapiens importin 8 variant prot... 30 6.8
>BC114929-1|AAI14930.1| 1038|Homo sapiens importin 7 protein.
Length = 1038
Score = 64.1 bits (149), Expect = 5e-10
Identities = 30/59 (50%), Positives = 41/59 (69%)
Frame = +1
Query: 13 PALYHALTSVLSEDQKKQLSAVFVLADQRKAQMDSRRIEQSGGYSFTVPAQVPTTFKFG 189
P Y ALT L+E+Q+KQL + LADQR+A +S+ IE+ GGY F+ P VP++F FG
Sbjct: 974 PVWYQALTHGLNEEQRKQLQDIATLADQRRAAHESKMIEKHGGYKFSAPV-VPSSFNFG 1031
>AL137335-1|CAB70698.1| 208|Homo sapiens hypothetical protein
protein.
Length = 208
Score = 64.1 bits (149), Expect = 5e-10
Identities = 30/59 (50%), Positives = 41/59 (69%)
Frame = +1
Query: 13 PALYHALTSVLSEDQKKQLSAVFVLADQRKAQMDSRRIEQSGGYSFTVPAQVPTTFKFG 189
P Y ALT L+E+Q+KQL + LADQR+A +S+ IE+ GGY F+ P VP++F FG
Sbjct: 144 PVWYQALTHGLNEEQRKQLQDIATLADQRRAAHESKMIEKHGGYKFSAPV-VPSSFNFG 201
>AJ295844-1|CAC17609.1| 1010|Homo sapiens importin7 protein.
Length = 1010
Score = 64.1 bits (149), Expect = 5e-10
Identities = 30/59 (50%), Positives = 41/59 (69%)
Frame = +1
Query: 13 PALYHALTSVLSEDQKKQLSAVFVLADQRKAQMDSRRIEQSGGYSFTVPAQVPTTFKFG 189
P Y ALT L+E+Q+KQL + LADQR+A +S+ IE+ GGY F+ P VP++F FG
Sbjct: 946 PVWYQALTHGLNEEQRKQLQDIATLADQRRAAHESKMIEKHGGYKFSAPV-VPSSFNFG 1003
>AF098799-1|AAC68903.1| 1038|Homo sapiens RanBP7/importin 7 protein.
Length = 1038
Score = 64.1 bits (149), Expect = 5e-10
Identities = 30/59 (50%), Positives = 41/59 (69%)
Frame = +1
Query: 13 PALYHALTSVLSEDQKKQLSAVFVLADQRKAQMDSRRIEQSGGYSFTVPAQVPTTFKFG 189
P Y ALT L+E+Q+KQL + LADQR+A +S+ IE+ GGY F+ P VP++F FG
Sbjct: 974 PVWYQALTHGLNEEQRKQLQDIATLADQRRAAHESKMIEKHGGYKFSAPV-VPSSFNFG 1031
>U77494-1|AAB67052.1| 1037|Homo sapiens RANBP8 protein.
Length = 1037
Score = 44.0 bits (99), Expect = 5e-04
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +1
Query: 4 STEPALYHALTSVLSEDQKKQLSAVFVLADQRKAQMDS-RRIEQSGGYSFTVPAQVPTTF 180
S + A Y L + LSEDQ+ L V+ LA+ R+ ++ ++IEQ GG++F V + F
Sbjct: 970 SRDAAWYQLLMAPLSEDQRTALQEVYTLAEHRRTVAEAKKKIEQQGGFTFENKG-VLSAF 1028
Query: 181 KFGS 192
FG+
Sbjct: 1029 NFGT 1032
>AB209602-1|BAD92839.1| 485|Homo sapiens importin 8 variant
protein.
Length = 485
Score = 30.3 bits (65), Expect = 6.8
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 4 STEPALYHALTSVLSEDQKKQLSAVFVLADQRK 102
S + A Y L + LSEDQ+ L V+ LA+ R+
Sbjct: 446 SRDAAWYQLLMAPLSEDQRTALQEVYTLAEHRR 478
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,882,936
Number of Sequences: 237096
Number of extensions: 1811296
Number of successful extensions: 7202
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7202
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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