BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22k02
(136 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 22 2.3
AJ010193-1|CAA09032.1| 684|Anopheles gambiae prophenoloxidase p... 22 2.3
AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein ... 21 7.0
DQ139945-1|ABA29466.1| 399|Anopheles gambiae protein O-fucosylt... 20 9.3
AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled ... 20 9.3
AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein... 20 9.3
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 22.2 bits (45), Expect = 2.3
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +1
Query: 19 IYVRRRNSLCPQKMSLFYLI 78
+Y+ RRNS+ P++ +YLI
Sbjct: 473 VYIDRRNSIFPEE-HRYYLI 491
>AJ010193-1|CAA09032.1| 684|Anopheles gambiae prophenoloxidase
protein.
Length = 684
Score = 22.2 bits (45), Expect = 2.3
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 88 GETKSNRIKTFFGDKVN 38
G+T+ ++ FFG K N
Sbjct: 497 GDTRRGTVRIFFGPKTN 513
>AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein
L8 protein.
Length = 261
Score = 20.6 bits (41), Expect = 7.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 43 VNFDDVHRFRAAK 5
VNF D +RFR +K
Sbjct: 61 VNFRDPYRFRLSK 73
>DQ139945-1|ABA29466.1| 399|Anopheles gambiae protein
O-fucosyltransferase 1 protein.
Length = 399
Score = 20.2 bits (40), Expect = 9.3
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 58 FFGDKVNFDDVH 23
FFG K+N+D H
Sbjct: 154 FFGPKLNYDIHH 165
>AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled
receptor protein.
Length = 611
Score = 20.2 bits (40), Expect = 9.3
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +1
Query: 46 CPQKMSLFYLISFLLFHPNY 105
C + + + YL+SFLL P +
Sbjct: 298 CHRFLFVAYLLSFLLSTPQW 317
>AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein
coupled receptor protein.
Length = 612
Score = 20.2 bits (40), Expect = 9.3
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +1
Query: 46 CPQKMSLFYLISFLLFHPNY 105
C + + + YL+SFLL P +
Sbjct: 299 CHRFLFVAYLLSFLLSTPQW 318
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,636
Number of Sequences: 2352
Number of extensions: 1159
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 24
effective length of database: 507,531
effective search space used: 10150620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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