Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22j20
         (611 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    25   0.58 
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    25   0.77 
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          24   1.3  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   3.1  
AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    23   3.1  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    22   4.1  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   4.1  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   9.5  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   9.5  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 25.0 bits (52), Expect = 0.58
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = +2

Query: 212 GSECSWSLTSYSGVS 256
           GS+C+W++TSY  ++
Sbjct: 67  GSKCTWTITSYHRIN 81


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 22/92 (23%), Positives = 39/92 (42%)
 Frame = +2

Query: 86  YILKRMGMGDESNKEAEPNTSKKDSQNENSDHDTREKNPNDPGSECSWSLTSYSGVSGLD 265
           YILK       + K+ + NT+  +     S  D    N  D  S+    LT +S  S L+
Sbjct: 334 YILKSTLTPKLARKQFQKNTTGLERSRSWSSLDNTNTNDQDYSSQN--YLTVHSFPSTLN 391

Query: 266 MARVRADVPKPIGKKEMKTVDRKSRRRSRPEK 361
           +  V+ D  +    + + +V+  S  +  P +
Sbjct: 392 IPSVKIDEDQKCSIESITSVNSTSSPKPFPRR 423


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/43 (25%), Positives = 24/43 (55%)
 Frame = -1

Query: 533 TCSQGSLTFGFPATIS*KLSRQTGPSSWSPLAFAFELYAPADV 405
           + ++ S  FG P++   K++R+ G    +P   +   ++PAD+
Sbjct: 483 SANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADL 525



 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/26 (26%), Positives = 15/26 (57%)
 Frame = +2

Query: 140 NTSKKDSQNENSDHDTREKNPNDPGS 217
           NT+  ++ N N++++      ND G+
Sbjct: 234 NTNASNNNNNNNNNNNNNNGANDNGN 259


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -1

Query: 161 GCPFYWCWVQP 129
           GCP  W W+ P
Sbjct: 382 GCPADWLWIVP 392


>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
           protein.
          Length = 72

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 527 CKFCGHRCCLRR*SRVKCFIKEFNC 601
           C+ C  + CL    R +C + E+ C
Sbjct: 36  CQECRLKKCLTVGMRPECMVPEYQC 60


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 498 GDNLVKIVETDRSLFLVTFGLRF 430
           G++L+  V+   S+F+ TFG  F
Sbjct: 161 GEHLLMTVDAGDSMFVHTFGAYF 183


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 527 CKFCGHRCCLRR*SRVKCFIKEFNC 601
           C+ C  + CL    R +C + E+ C
Sbjct: 239 CQECRLKKCLTVGMRPECVVPEYQC 263


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 122 NKEAEPNTSKKDSQNENSDHD 184
           N     ++SK D+QN N  +D
Sbjct: 428 NHNQARHSSKSDNQNNNQHND 448


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = +2

Query: 161 QNENSDHDTREKNPNDPGSECSWSLTSYSGVSG 259
           Q E +  DTRE  P+D   +    L S     G
Sbjct: 145 QPETTKVDTREVQPHDASEKEQLGLASVKAEPG 177


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,039
Number of Sequences: 438
Number of extensions: 3654
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)