Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22j16
(697 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC017425-1|AAH17425.1| 322|Homo sapiens ribokinase protein. 170 4e-42
AJ404857-1|CAC12877.1| 322|Homo sapiens ribokinase protein. 170 4e-42
BC027994-1|AAH27994.1| 605|Homo sapiens beta-transducin repeat ... 31 3.0
AL627424-17|CAI41042.1| 605|Homo sapiens beta-transducin repeat... 31 3.0
AL445463-2|CAI12963.1| 605|Homo sapiens beta-transducin repeat ... 31 3.0
AL445463-1|CAI12962.1| 191|Homo sapiens beta-transducin repeat ... 31 3.0
AL133387-1|CAH70020.1| 605|Homo sapiens beta-transducin repeat ... 31 3.0
AF101784-1|AAD08702.1| 605|Homo sapiens b-TRCP variant E3RS-Ika... 31 3.0
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 30 6.9
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 30 6.9
BC146761-1|AAI46762.1| 1534|Homo sapiens slit homolog 1 (Drosoph... 30 9.1
AY029183-1|AAK31796.1| 798|Homo sapiens SLIT1 isoform B protein. 30 9.1
AL512424-5|CAI14258.1| 1534|Homo sapiens slit homolog 1 (Drosoph... 30 9.1
AL512424-4|CAI14259.1| 1461|Homo sapiens slit homolog 1 (Drosoph... 30 9.1
AL512424-3|CAI14257.1| 409|Homo sapiens slit homolog 1 (Drosoph... 30 9.1
AL512424-1|CAI14255.1| 782|Homo sapiens slit homolog 1 (Drosoph... 30 9.1
AL442123-4|CAH70918.1| 1534|Homo sapiens slit homolog 1 (Drosoph... 30 9.1
AL442123-3|CAH70917.1| 1461|Homo sapiens slit homolog 1 (Drosoph... 30 9.1
AB017167-1|BAA35184.1| 1534|Homo sapiens Slit-1 protein protein. 30 9.1
AB011537-1|BAA32465.3| 1618|Homo sapiens MEGF4 protein. 30 9.1
>BC017425-1|AAH17425.1| 322|Homo sapiens ribokinase protein.
Length = 322
Score = 170 bits (414), Expect = 4e-42
Identities = 92/230 (40%), Positives = 134/230 (58%), Gaps = 5/230 (2%)
Frame = +2
Query: 23 KLPKSGETLHXXXXXXXXXXXXANQCVAAAKLGGNAYMICRVGDDQWGKKYKDHLKNEGV 202
+LPK+GET+H ANQCV AA+LG M+C+VG D +G Y ++LK +
Sbjct: 34 RLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDI 93
Query: 203 NVSYVHITKNETTGVAQIVVAENGENQIVIVPGANKCLSVQDVEESIELIKNADVLIGQL 382
+ + + TK+ TG A I+V G+N IVIV GAN L+ +D+ + +I A V++ QL
Sbjct: 94 STEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLRAAANVISRAKVMVCQL 153
Query: 383 ETPFETTYTAFKL--NNGIK-LLNAAPALTDI-RKILPFCTILCVNELEASVLTNVDV-T 547
E T+ A + +G+K L N APA+ D+ + + C NE EA +LT + V +
Sbjct: 154 EITPATSLEALTMARRSGVKTLFNPAPAIADLDPQFYTLSDVFCCNESEAEILTGLTVGS 213
Query: 548 ISNASMAAKKLLETGCETVIITLGSEGAVYMSKNEECPKHVLCEAVNPVD 697
++A AA LL+ GC+ VIITLG+EG V +S+ E PKH+ E V VD
Sbjct: 214 AADAGEAALVLLKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVKAVD 263
>AJ404857-1|CAC12877.1| 322|Homo sapiens ribokinase protein.
Length = 322
Score = 170 bits (414), Expect = 4e-42
Identities = 92/230 (40%), Positives = 134/230 (58%), Gaps = 5/230 (2%)
Frame = +2
Query: 23 KLPKSGETLHXXXXXXXXXXXXANQCVAAAKLGGNAYMICRVGDDQWGKKYKDHLKNEGV 202
+LPK+GET+H ANQCV AA+LG M+C+VG D +G Y ++LK +
Sbjct: 34 RLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDI 93
Query: 203 NVSYVHITKNETTGVAQIVVAENGENQIVIVPGANKCLSVQDVEESIELIKNADVLIGQL 382
+ + + TK+ TG A I+V G+N IVIV GAN L+ +D+ + +I A V++ QL
Sbjct: 94 STEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLRAAANVISRAKVMVCQL 153
Query: 383 ETPFETTYTAFKL--NNGIK-LLNAAPALTDI-RKILPFCTILCVNELEASVLTNVDV-T 547
E T+ A + +G+K L N APA+ D+ + + C NE EA +LT + V +
Sbjct: 154 EITPATSLEALTMARRSGVKTLFNPAPAIADLDPQFYTLSDVFCCNESEAEILTGLTVGS 213
Query: 548 ISNASMAAKKLLETGCETVIITLGSEGAVYMSKNEECPKHVLCEAVNPVD 697
++A AA LL+ GC+ VIITLG+EG V +S+ E PKH+ E V VD
Sbjct: 214 AADAGEAALVLLKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVKAVD 263
>BC027994-1|AAH27994.1| 605|Homo sapiens beta-transducin repeat
containing protein.
Length = 605
Score = 31.5 bits (68), Expect = 3.0
Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 1/120 (0%)
Frame = +2
Query: 311 CLSVQDVEESIELIKNADVLIGQLETPFETTYTAFKLNNGIKLLNAAPALTDIRKILPFC 490
C S+ D S+ + N G L T F+ + NNG P +R+ C
Sbjct: 27 CSSLADSMPSLRCLYNPGT--GAL-TAFQNSSEREDCNNGEPPRKIIPEKNSLRQTYNSC 83
Query: 491 TILCVNELEASVLTNVDVTISNASMAAKKLLETGCETVIITLGSE-GAVYMSKNEECPKH 667
LC+N+ E L + + N AK L G ++I+ + A Y + E C K+
Sbjct: 84 ARLCLNQ-ETVCLASTAMKTENC--VAKTKLANGTSSMIVPKQRKLSASYEKEKELCVKY 140
>AL627424-17|CAI41042.1| 605|Homo sapiens beta-transducin repeat
containing protein.
Length = 605
Score = 31.5 bits (68), Expect = 3.0
Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 1/120 (0%)
Frame = +2
Query: 311 CLSVQDVEESIELIKNADVLIGQLETPFETTYTAFKLNNGIKLLNAAPALTDIRKILPFC 490
C S+ D S+ + N G L T F+ + NNG P +R+ C
Sbjct: 27 CSSLADSMPSLRCLYNPGT--GAL-TAFQNSSEREDCNNGEPPRKIIPEKNSLRQTYNSC 83
Query: 491 TILCVNELEASVLTNVDVTISNASMAAKKLLETGCETVIITLGSE-GAVYMSKNEECPKH 667
LC+N+ E L + + N AK L G ++I+ + A Y + E C K+
Sbjct: 84 ARLCLNQ-ETVCLASTAMKTENC--VAKTKLANGTSSMIVPKQRKLSASYEKEKELCVKY 140
>AL445463-2|CAI12963.1| 605|Homo sapiens beta-transducin repeat
containing protein.
Length = 605
Score = 31.5 bits (68), Expect = 3.0
Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 1/120 (0%)
Frame = +2
Query: 311 CLSVQDVEESIELIKNADVLIGQLETPFETTYTAFKLNNGIKLLNAAPALTDIRKILPFC 490
C S+ D S+ + N G L T F+ + NNG P +R+ C
Sbjct: 27 CSSLADSMPSLRCLYNPGT--GAL-TAFQNSSEREDCNNGEPPRKIIPEKNSLRQTYNSC 83
Query: 491 TILCVNELEASVLTNVDVTISNASMAAKKLLETGCETVIITLGSE-GAVYMSKNEECPKH 667
LC+N+ E L + + N AK L G ++I+ + A Y + E C K+
Sbjct: 84 ARLCLNQ-ETVCLASTAMKTENC--VAKTKLANGTSSMIVPKQRKLSASYEKEKELCVKY 140
>AL445463-1|CAI12962.1| 191|Homo sapiens beta-transducin repeat
containing protein.
Length = 191
Score = 31.5 bits (68), Expect = 3.0
Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 1/120 (0%)
Frame = +2
Query: 311 CLSVQDVEESIELIKNADVLIGQLETPFETTYTAFKLNNGIKLLNAAPALTDIRKILPFC 490
C S+ D S+ + N G L T F+ + NNG P +R+ C
Sbjct: 9 CSSLADSMPSLRCLYNPGT--GAL-TAFQNSSEREDCNNGEPPRKIIPEKNSLRQTYNSC 65
Query: 491 TILCVNELEASVLTNVDVTISNASMAAKKLLETGCETVIITLGSE-GAVYMSKNEECPKH 667
LC+N+ E L + + N AK L G ++I+ + A Y + E C K+
Sbjct: 66 ARLCLNQ-ETVCLASTAMKTENC--VAKTKLANGTSSMIVPKQRKLSASYEKEKELCVKY 122
>AL133387-1|CAH70020.1| 605|Homo sapiens beta-transducin repeat
containing protein.
Length = 605
Score = 31.5 bits (68), Expect = 3.0
Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 1/120 (0%)
Frame = +2
Query: 311 CLSVQDVEESIELIKNADVLIGQLETPFETTYTAFKLNNGIKLLNAAPALTDIRKILPFC 490
C S+ D S+ + N G L T F+ + NNG P +R+ C
Sbjct: 27 CSSLADSMPSLRCLYNPGT--GAL-TAFQNSSEREDCNNGEPPRKIIPEKNSLRQTYNSC 83
Query: 491 TILCVNELEASVLTNVDVTISNASMAAKKLLETGCETVIITLGSE-GAVYMSKNEECPKH 667
LC+N+ E L + + N AK L G ++I+ + A Y + E C K+
Sbjct: 84 ARLCLNQ-ETVCLASTAMKTENC--VAKTKLANGTSSMIVPKQRKLSASYEKEKELCVKY 140
>AF101784-1|AAD08702.1| 605|Homo sapiens b-TRCP variant
E3RS-IkappaB protein.
Length = 605
Score = 31.5 bits (68), Expect = 3.0
Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 1/120 (0%)
Frame = +2
Query: 311 CLSVQDVEESIELIKNADVLIGQLETPFETTYTAFKLNNGIKLLNAAPALTDIRKILPFC 490
C S+ D S+ + N G L T F+ + NNG P +R+ C
Sbjct: 27 CSSLADSMPSLRCLYNPGT--GAL-TAFQNSSEREDCNNGEPPRKIIPEKNSLRQTYNSC 83
Query: 491 TILCVNELEASVLTNVDVTISNASMAAKKLLETGCETVIITLGSE-GAVYMSKNEECPKH 667
LC+N+ E L + + N AK L G ++I+ + A Y + E C K+
Sbjct: 84 ARLCLNQ-ETVCLASTAMKTENC--VAKTKLANGTSSMIVPKQRKLSASYEKEKELCVKY 140
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 30.3 bits (65), Expect = 6.9
Identities = 33/158 (20%), Positives = 65/158 (41%), Gaps = 3/158 (1%)
Frame = -2
Query: 696 STGLTASHKTCLGHSSFFDI*TAPSDPSVIITVS-QPVSSNFFAAIEAFEMVTSTLVRTD 520
ST ++S T G S T S P S PV+++ + + + TSTLV T
Sbjct: 309 STEASSSPTTAEGTSIPTSTYTEGSTPLTSTPASTMPVATSEMSTLSITPVDTSTLVTTS 368
Query: 519 ASNSLTQSIVQNGKIFRISVNAGAAFNSFIPLFNLNAXXXXXXXXXSCPIRTSAFFINSI 340
S + + + +++ G+ + +P+ + + P+ + F +
Sbjct: 369 TEPSSLPTTAEATSMLTSTLSEGSTPLTNMPVSTILVASSEASTTSTIPVDSKTFVTTAS 428
Query: 339 DSSTSWTLRH--LLAPGTITI*FSPFSATTICATPVVS 232
++S+S T +A T + +P ++ + TPV S
Sbjct: 429 EASSSPTTAEDTSIATSTPSEGSTPLTSMPVSTTPVAS 466
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 30.3 bits (65), Expect = 6.9
Identities = 33/158 (20%), Positives = 65/158 (41%), Gaps = 3/158 (1%)
Frame = -2
Query: 696 STGLTASHKTCLGHSSFFDI*TAPSDPSVIITVS-QPVSSNFFAAIEAFEMVTSTLVRTD 520
ST ++S T G S T S P S PV+++ + + + TSTLV T
Sbjct: 309 STEASSSPTTAEGTSIPTSTYTEGSTPLTSTPASTMPVATSEMSTLSITPVDTSTLVTTS 368
Query: 519 ASNSLTQSIVQNGKIFRISVNAGAAFNSFIPLFNLNAXXXXXXXXXSCPIRTSAFFINSI 340
S + + + +++ G+ + +P+ + + P+ + F +
Sbjct: 369 TEPSSLPTTAEATSMLTSTLSEGSTPLTNMPVSTILVASSEASTTSTIPVDSKTFVTTAS 428
Query: 339 DSSTSWTLRH--LLAPGTITI*FSPFSATTICATPVVS 232
++S+S T +A T + +P ++ + TPV S
Sbjct: 429 EASSSPTTAEDTSIATSTPSEGSTPLTSMPVSTTPVAS 466
>BC146761-1|AAI46762.1| 1534|Homo sapiens slit homolog 1
(Drosophila) protein.
Length = 1534
Score = 29.9 bits (64), Expect = 9.1
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 7/133 (5%)
Frame = +2
Query: 179 DHLKNEGVNVSYVHITKNETTGVAQIVVAENGENQIVIVPGANKCLSVQDVEESIELIKN 358
+ L+ G N++ +H KN+ G+ Q+ V + ENQI +V + D++E L N
Sbjct: 64 ERLELNGNNITRIH--KNDFAGLKQLRVLQLMENQIGVVERG----AFDDMKELERLRLN 117
Query: 359 ADVLIGQLETPFETTYTAFKLNNGIKLLNAAP-----ALTDIRKI-LPFCTILCVNELEA 520
+ L E F+ +L+ + A P TD++ + L I C+ E
Sbjct: 118 RNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAF 177
Query: 521 SVLTNVDV-TISN 556
L ++V T++N
Sbjct: 178 RALRGLEVLTLNN 190
>AY029183-1|AAK31796.1| 798|Homo sapiens SLIT1 isoform B protein.
Length = 798
Score = 29.9 bits (64), Expect = 9.1
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Frame = +2
Query: 179 DHLKNEGVNVSYVHITKNETTGVAQIVVAENGENQIVIVPGANKCLSVQDVEESIELIKN 358
+ L+ G N++ +H KN+ G+ Q+ V + ENQI GA + + D++E L N
Sbjct: 47 ERLELNGNNITRIH--KNDFAGLKQLRVLQLMENQI----GAVERGAFDDMKELERLRLN 100
Query: 359 ADVLIGQLETPFETTYTAFKLNNGIKLLNAAP-----ALTDIRKI-LPFCTILCVNELEA 520
+ L E F+ +L+ + A P TD++ + L I C+ E
Sbjct: 101 RNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAF 160
Query: 521 SVLTNVDV-TISN 556
L ++V T++N
Sbjct: 161 RALRGLEVLTLNN 173
>AL512424-5|CAI14258.1| 1534|Homo sapiens slit homolog 1
(Drosophila) protein.
Length = 1534
Score = 29.9 bits (64), Expect = 9.1
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Frame = +2
Query: 179 DHLKNEGVNVSYVHITKNETTGVAQIVVAENGENQIVIVPGANKCLSVQDVEESIELIKN 358
+ L+ G N++ +H KN+ G+ Q+ V + ENQI GA + + D++E L N
Sbjct: 64 ERLELNGNNITRIH--KNDFAGLKQLRVLQLMENQI----GAVERGAFDDMKELERLRLN 117
Query: 359 ADVLIGQLETPFETTYTAFKLNNGIKLLNAAP-----ALTDIRKI-LPFCTILCVNELEA 520
+ L E F+ +L+ + A P TD++ + L I C+ E
Sbjct: 118 RNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAF 177
Query: 521 SVLTNVDV-TISN 556
L ++V T++N
Sbjct: 178 RALRGLEVLTLNN 190
>AL512424-4|CAI14259.1| 1461|Homo sapiens slit homolog 1
(Drosophila) protein.
Length = 1461
Score = 29.9 bits (64), Expect = 9.1
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Frame = +2
Query: 179 DHLKNEGVNVSYVHITKNETTGVAQIVVAENGENQIVIVPGANKCLSVQDVEESIELIKN 358
+ L+ G N++ +H KN+ G+ Q+ V + ENQI GA + + D++E L N
Sbjct: 64 ERLELNGNNITRIH--KNDFAGLKQLRVLQLMENQI----GAVERGAFDDMKELERLRLN 117
Query: 359 ADVLIGQLETPFETTYTAFKLNNGIKLLNAAP-----ALTDIRKI-LPFCTILCVNELEA 520
+ L E F+ +L+ + A P TD++ + L I C+ E
Sbjct: 118 RNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAF 177
Query: 521 SVLTNVDV-TISN 556
L ++V T++N
Sbjct: 178 RALRGLEVLTLNN 190
>AL512424-3|CAI14257.1| 409|Homo sapiens slit homolog 1
(Drosophila) protein.
Length = 409
Score = 29.9 bits (64), Expect = 9.1
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Frame = +2
Query: 179 DHLKNEGVNVSYVHITKNETTGVAQIVVAENGENQIVIVPGANKCLSVQDVEESIELIKN 358
+ L+ G N++ +H KN+ G+ Q+ V + ENQI GA + + D++E L N
Sbjct: 64 ERLELNGNNITRIH--KNDFAGLKQLRVLQLMENQI----GAVERGAFDDMKELERLRLN 117
Query: 359 ADVLIGQLETPFETTYTAFKLNNGIKLLNAAP-----ALTDIRKI-LPFCTILCVNELEA 520
+ L E F+ +L+ + A P TD++ + L I C+ E
Sbjct: 118 RNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAF 177
Query: 521 SVLTNVDV-TISN 556
L ++V T++N
Sbjct: 178 RALRGLEVLTLNN 190
>AL512424-1|CAI14255.1| 782|Homo sapiens slit homolog 1
(Drosophila) protein.
Length = 782
Score = 29.9 bits (64), Expect = 9.1
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Frame = +2
Query: 179 DHLKNEGVNVSYVHITKNETTGVAQIVVAENGENQIVIVPGANKCLSVQDVEESIELIKN 358
+ L+ G N++ +H KN+ G+ Q+ V + ENQI GA + + D++E L N
Sbjct: 47 ERLELNGNNITRIH--KNDFAGLKQLRVLQLMENQI----GAVERGAFDDMKELERLRLN 100
Query: 359 ADVLIGQLETPFETTYTAFKLNNGIKLLNAAP-----ALTDIRKI-LPFCTILCVNELEA 520
+ L E F+ +L+ + A P TD++ + L I C+ E
Sbjct: 101 RNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAF 160
Query: 521 SVLTNVDV-TISN 556
L ++V T++N
Sbjct: 161 RALRGLEVLTLNN 173
>AL442123-4|CAH70918.1| 1534|Homo sapiens slit homolog 1
(Drosophila) protein.
Length = 1534
Score = 29.9 bits (64), Expect = 9.1
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Frame = +2
Query: 179 DHLKNEGVNVSYVHITKNETTGVAQIVVAENGENQIVIVPGANKCLSVQDVEESIELIKN 358
+ L+ G N++ +H KN+ G+ Q+ V + ENQI GA + + D++E L N
Sbjct: 64 ERLELNGNNITRIH--KNDFAGLKQLRVLQLMENQI----GAVERGAFDDMKELERLRLN 117
Query: 359 ADVLIGQLETPFETTYTAFKLNNGIKLLNAAP-----ALTDIRKI-LPFCTILCVNELEA 520
+ L E F+ +L+ + A P TD++ + L I C+ E
Sbjct: 118 RNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAF 177
Query: 521 SVLTNVDV-TISN 556
L ++V T++N
Sbjct: 178 RALRGLEVLTLNN 190
>AL442123-3|CAH70917.1| 1461|Homo sapiens slit homolog 1
(Drosophila) protein.
Length = 1461
Score = 29.9 bits (64), Expect = 9.1
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Frame = +2
Query: 179 DHLKNEGVNVSYVHITKNETTGVAQIVVAENGENQIVIVPGANKCLSVQDVEESIELIKN 358
+ L+ G N++ +H KN+ G+ Q+ V + ENQI GA + + D++E L N
Sbjct: 64 ERLELNGNNITRIH--KNDFAGLKQLRVLQLMENQI----GAVERGAFDDMKELERLRLN 117
Query: 359 ADVLIGQLETPFETTYTAFKLNNGIKLLNAAP-----ALTDIRKI-LPFCTILCVNELEA 520
+ L E F+ +L+ + A P TD++ + L I C+ E
Sbjct: 118 RNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAF 177
Query: 521 SVLTNVDV-TISN 556
L ++V T++N
Sbjct: 178 RALRGLEVLTLNN 190
>AB017167-1|BAA35184.1| 1534|Homo sapiens Slit-1 protein protein.
Length = 1534
Score = 29.9 bits (64), Expect = 9.1
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Frame = +2
Query: 179 DHLKNEGVNVSYVHITKNETTGVAQIVVAENGENQIVIVPGANKCLSVQDVEESIELIKN 358
+ L+ G N++ +H KN+ G+ Q+ V + ENQI GA + + D++E L N
Sbjct: 64 ERLELNGNNITRIH--KNDFAGLKQLRVLQLMENQI----GAVERGAFDDMKELERLRLN 117
Query: 359 ADVLIGQLETPFETTYTAFKLNNGIKLLNAAP-----ALTDIRKI-LPFCTILCVNELEA 520
+ L E F+ +L+ + A P TD++ + L I C+ E
Sbjct: 118 RNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLRLDKNQISCIEEGAF 177
Query: 521 SVLTNVDV-TISN 556
L ++V T++N
Sbjct: 178 RALRGLEVLTLNN 190
>AB011537-1|BAA32465.3| 1618|Homo sapiens MEGF4 protein.
Length = 1618
Score = 29.9 bits (64), Expect = 9.1
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 7/133 (5%)
Frame = +2
Query: 179 DHLKNEGVNVSYVHITKNETTGVAQIVVAENGENQIVIVPGANKCLSVQDVEESIELIKN 358
+ L+ G N++ +H KN+ G+ Q+ V + ENQI +V + D++E L N
Sbjct: 148 ERLELNGNNITRIH--KNDFAGLKQLRVLQLMENQIGVVERG----AFDDMKELERLRLN 201
Query: 359 ADVLIGQLETPFETTYTAFKLNNGIKLLNAAP-----ALTDIRKI-LPFCTILCVNELEA 520
+ L E F+ +L+ + A P TD++ + L I C+ E
Sbjct: 202 RNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAF 261
Query: 521 SVLTNVDV-TISN 556
L ++V T++N
Sbjct: 262 RALRGLEVLTLNN 274
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,235,296
Number of Sequences: 237096
Number of extensions: 1948888
Number of successful extensions: 3334
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3326
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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