Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22j16
         (697 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   2.8  
AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    22   4.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.4  
AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    22   6.4  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    22   6.4  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    21   8.5  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   8.5  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   8.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   8.5  
AB178034-1|BAD27112.1|   76|Apis mellifera apiceropsin protein.        21   8.5  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 359 ADVLIGQLETPFETTYTAFKL 421
           AD+++G    PF  T+  FK+
Sbjct: 110 ADLMVGLAVLPFSATWEVFKV 130


>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 15/56 (26%), Positives = 24/56 (42%)
 Frame = +2

Query: 329 VEESIELIKNADVLIGQLETPFETTYTAFKLNNGIKLLNAAPALTDIRKILPFCTI 496
           V   +EL +N  +   +  +PF+ T   FKL    +         D RK+   CT+
Sbjct: 37  VSPVVELTENNGLYTLKTTSPFKNTEIKFKLGEEFE-----EETVDGRKVKSVCTL 87


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 60  NSLPVSEEKVQTSVLLLR 113
           NSL  SEEK++  +L LR
Sbjct: 351 NSLSSSEEKLKQDILNLR 368


>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 20/75 (26%), Positives = 27/75 (36%)
 Frame = +2

Query: 242 GVAQIVVAENGENQIVIVPGANKCLSVQDVEESIELIKNADVLIGQLETPFETTYTAFKL 421
           G  Q V   N E    ++   N   +V     S EL KN D       +   T    FK+
Sbjct: 4   GKFQFVSQNNFEEFAKVLGDQNLVNTVLQPRPSFELSKNGDEWTFTSSSGDNTYTKTFKM 63

Query: 422 NNGIKLLNAAPALTD 466
           N  +      P+L D
Sbjct: 64  N--VPFEETLPSLPD 76


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 20/75 (26%), Positives = 27/75 (36%)
 Frame = +2

Query: 242 GVAQIVVAENGENQIVIVPGANKCLSVQDVEESIELIKNADVLIGQLETPFETTYTAFKL 421
           G  Q V   N E    ++   N   +V     S EL KN D       +   T    FK+
Sbjct: 6   GKFQFVSQNNFEEFAKVLGDQNLVNTVLQPRPSFELSKNGDEWTFTSSSGDNTYTKTFKM 65

Query: 422 NNGIKLLNAAPALTD 466
           N  +      P+L D
Sbjct: 66  N--VPFEETLPSLPD 78


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 96  WFAPFPPKLVVNF 58
           WF  + P LV+NF
Sbjct: 287 WFMAWTPYLVINF 299


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 155 HPPLYKSCRHFHLI 114
           HP LY+  R F+L+
Sbjct: 52  HPELYQKARTFNLV 65


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 66  VNFVPCKVSPDLGSFGAYL 10
           V F  CK  PD+ ++GA L
Sbjct: 382 VEFGLCKEGPDVKAYGAGL 400


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 155 HPPLYKSCRHFHLI 114
           HP LY+  R F+L+
Sbjct: 52  HPELYQKARTFNLV 65


>AB178034-1|BAD27112.1|   76|Apis mellifera apiceropsin protein.
          Length = 76

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 96 WFAPFPPKLVVNF 58
          WF  + P LV+NF
Sbjct: 37 WFMAWTPYLVINF 49


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,429
Number of Sequences: 438
Number of extensions: 3869
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)