Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22j11
(728 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.14 |vps24||vacuolar sorting protein Vps24|Schizosaccharo... 110 2e-25
SPAC4F8.01 |did4|SPAC644.03c, vps2|vacuolar sorting protein Did4... 52 6e-08
SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces p... 30 0.39
SPAC3G9.06 |frs2||phenylalanine-tRNA ligase alpha subunit Frs2 |... 30 0.39
SPAC18G6.06 |||U3 snoRNP-associated protein Utp11|Schizosaccharo... 29 0.68
SPBP19A11.04c |mor2|cps12|morphogenesis protein Mor2|Schizosacch... 28 1.2
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 28 1.2
SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase Ogm1|Schi... 27 2.1
SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|c... 27 2.1
SPAC328.10c |rps502|rps5-2|40S ribosomal protein S5|Schizosaccha... 27 2.1
SPAC8C9.08 |rps5||40S ribosomal protein S5|Schizosaccharomyces p... 27 2.1
SPAC3A11.04 |||siepin homolog|Schizosaccharomyces pombe|chr 1|||... 27 2.1
SPBC15D4.08c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual 27 2.7
SPAC1D4.02c |||human GRASP protein homolog |Schizosaccharomyces ... 27 2.7
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 27 2.7
SPBC6B1.09c |nbs1||Mre11 complex subunit Nbs1|Schizosaccharomyce... 27 3.6
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 27 3.6
SPAC17G6.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 3.6
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 27 3.6
SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyce... 26 6.3
SPBC11B10.01 |alg2|SPBC32H8.14|mannosyltransferase complex subun... 26 6.3
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 26 6.3
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 25 8.4
>SPAC9E9.14 |vps24||vacuolar sorting protein
Vps24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 231
Score = 110 bits (264), Expect = 2e-25
Identities = 54/132 (40%), Positives = 88/132 (66%)
Frame = +1
Query: 121 PKEMVNEWSHKLRKEGYNLDRQVRAIQREEEKIKRSLKEAATKNDKQVCTILAKEIIRSR 300
P+E +W +RKE LDRQV ++ +K + LK+ A ++D ILAKEI R+
Sbjct: 13 PQEQNRKWQSIIRKEQRQLDRQVYHLKAGRKKAEVQLKQLAKQSDITNMRILAKEIARAN 72
Query: 301 KAINKIYTSKAHLNSVQLQMKNQLATLRVAGSLQKSTEVMQAMQALLRLPEVAATMQELS 480
+ ++ SKA L S+ LQ+ +Q+A L++ G++Q ST++MQ + +L+RLP+++ TM+ LS
Sbjct: 73 RHGKRLAESKALLGSLSLQLNDQMAMLKIQGTMQSSTKIMQDVSSLIRLPQLSETMRNLS 132
Query: 481 KEMMKAGIIEEM 516
E+ KAG++EEM
Sbjct: 133 MELTKAGVLEEM 144
>SPAC4F8.01 |did4|SPAC644.03c, vps2|vacuolar sorting protein
Did4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 210
Score = 52.4 bits (120), Expect = 6e-08
Identities = 27/131 (20%), Positives = 65/131 (49%)
Frame = +1
Query: 94 LFGKSPERNPKEMVNEWSHKLRKEGYNLDRQVRAIQREEEKIKRSLKEAATKNDKQVCTI 273
LFG ++P+E + L + LDR+ + + E + + +K +A + I
Sbjct: 7 LFGGG--KSPQEQLRAHQRSLGRAERELDRERTKLDQRERALIQEIKGSAKAGNTGAARI 64
Query: 274 LAKEIIRSRKAINKIYTSKAHLNSVQLQMKNQLATLRVAGSLQKSTEVMQAMQALLRLPE 453
A++++R R + K+ +K L ++ L+++ + ++ S++ +T ++ M + +P
Sbjct: 65 QARDLMRLRNSRKKMMNAKTQLQAISLRLQTMRTSEQMMQSMRGATRLLTGMNKSMNIPA 124
Query: 454 VAATMQELSKE 486
+A Q+ +E
Sbjct: 125 MARITQQFERE 135
>SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 29.9 bits (64), Expect = 0.39
Identities = 25/110 (22%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Frame = +1
Query: 112 ERNPKEMVNEWSHKLRKEGYNLDRQVRAIQREEEKIKRSLKEAATKNDKQVCTILAKEII 291
E+ ++ E HK ++ Q+ A ++EEE ++ +KE K+D + + +A II
Sbjct: 148 EKERIRLIEEQKHKENEQRRLKQEQIDAKRKEEEAREKRMKE-TFKDDPEEDSNMAWSII 206
Query: 292 RSRKA-INKIYTSKAHLNSVQLQMKNQLATLRVAGSLQKSTEVMQAMQAL 438
K + + K L + K ++ T R+ + ++++M+ Q L
Sbjct: 207 HKIKTEVVAPISEKKELKNYCFTQKRKI-TPRLGQITKSNSQIMKITQLL 255
>SPAC3G9.06 |frs2||phenylalanine-tRNA ligase alpha subunit Frs2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 499
Score = 29.9 bits (64), Expect = 0.39
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +1
Query: 154 LRKEGYNLDRQVRAIQREEEKIKRSLKEAATKNDKQVCTILAKEIIRSRKAINKIYTSKA 333
++K+G L + +I E K+ +KE T +D + T L K + R I K
Sbjct: 118 IKKDGDKLVKNTDSITDETPKVLSEIKEHGTISDSKTLTDLKKRKLVERNKIMYFSLRKG 177
Query: 334 HLNSVQLQMKN 366
S+Q++ N
Sbjct: 178 PNFSLQIEKLN 188
>SPAC18G6.06 |||U3 snoRNP-associated protein
Utp11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 249
Score = 29.1 bits (62), Expect = 0.68
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 103 KSPERNPKEMVNEWSHKLRKEGYNLD-RQVRAIQREEEKIKRS 228
K+ ERNP E +E +HK K G L+ R+ I + KI ++
Sbjct: 55 KALERNPDEFYHEMTHKKTKNGVPLEQREDSTIDMDTIKILKT 97
>SPBP19A11.04c |mor2|cps12|morphogenesis protein
Mor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2196
Score = 28.3 bits (60), Expect = 1.2
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -1
Query: 272 IVHTCLSFLVAASFSDRLIFSSSLWIALTCLSKLY 168
I+ T S+++ + D L +S LW A+ CL+ ++
Sbjct: 1633 ILRTFNSYVLVMNSDDLLSYSQILWTAIACLTTIH 1667
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 28.3 bits (60), Expect = 1.2
Identities = 20/91 (21%), Positives = 40/91 (43%)
Frame = +1
Query: 118 NPKEMVNEWSHKLRKEGYNLDRQVRAIQREEEKIKRSLKEAATKNDKQVCTILAKEIIRS 297
N + ++ H+LR + N+ Q + E K+K E T+ + + + K + +
Sbjct: 787 NSYQSISNLYHELRDDHVNMQSQNNTLLESESKLKTDC-ENLTQQNMTLIDNVQKLMHKH 845
Query: 298 RKAINKIYTSKAHLNSVQLQMKNQLATLRVA 390
+K+ K + L +KN ++L VA
Sbjct: 846 VNQESKVSELKEVNGKLSLDLKNLRSSLNVA 876
>SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase
Ogm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 893
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 100 GKSP-ERNPKEMVNEWSHKLRKEGYNLDRQVRAIQREEEKIKRSLKEAATKNDKQVCTIL 276
G +P +N + W ++ + GY L Q +A Q E +++ EAA ++ +
Sbjct: 755 GDTPLNKNLNDYYPSWDQRV-EAGYKLAAQQKAEQEAREAAEKAASEAAERSSSEAAASS 813
Query: 277 AKEII 291
+ E +
Sbjct: 814 SSESV 818
>SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 554
Score = 27.5 bits (58), Expect = 2.1
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = -1
Query: 482 LLSSCIVAATSGRRNRACIACITSVDFCNDPATLKVAN*FFICNCTELRCALLVYILLIA 303
L++ +V GR+ C++ I + F T K +N + NCT + ++Y +L A
Sbjct: 424 LIAGVLVEFRIGRKGTLCLSLILTGVFLFASTTAKTSNAYLGWNCTFSFFSDIMYGVLYA 483
Query: 302 F 300
+
Sbjct: 484 Y 484
>SPAC328.10c |rps502|rps5-2|40S ribosomal protein
S5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 203
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 187 VRAIQREEEKIKRSLKEAATKNDKQVCTILAKEIIRSRKAINKIYTSK 330
+R + + I +EAA +N K + LA+EII + K + Y K
Sbjct: 143 LRRVNQALALITIGAREAAFRNVKSISECLAEEIINAAKGSSNSYAIK 190
>SPAC8C9.08 |rps5||40S ribosomal protein S5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 187 VRAIQREEEKIKRSLKEAATKNDKQVCTILAKEIIRSRKAINKIYTSK 330
+R + + I +EAA +N K + LA+EII + K + Y K
Sbjct: 143 LRRVNQALALITIGAREAAFRNVKSISECLAEEIINAAKGSSNSYAIK 190
>SPAC3A11.04 |||siepin homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 236
Score = 27.5 bits (58), Expect = 2.1
Identities = 20/67 (29%), Positives = 31/67 (46%)
Frame = -1
Query: 398 NDPATLKVAN*FFICNCTELRCALLVYILLIAFLDLMISFASIVHTCLSFLVAASFSDRL 219
N TL V F + N T + + +Y I F + ++FAS +H F+ S L
Sbjct: 148 NSITTLSVR--FSVKN-TPAQAIVKIYSKDIEFYEATLAFASKLHGMRWFMYTHKVSAFL 204
Query: 218 IFSSSLW 198
+F+S W
Sbjct: 205 VFTSLFW 211
>SPBC15D4.08c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual
Length = 138
Score = 27.1 bits (57), Expect = 2.7
Identities = 28/123 (22%), Positives = 53/123 (43%)
Frame = +1
Query: 115 RNPKEMVNEWSHKLRKEGYNLDRQVRAIQREEEKIKRSLKEAATKNDKQVCTILAKEIIR 294
R+ EM++E+ + + Y L I + +++K S K ND++ +R
Sbjct: 15 RHEPEMLSEYPSLMFEHSY-LASPSSPIDQVHDELKHSQKRPRLTNDEETIPEEDDSTVR 73
Query: 295 SRKAINKIYTSKAHLNSVQLQMKNQLATLRVAGSLQKSTEVMQAMQALLRLPEVAATMQE 474
+ + S L + + T ++ +L K + Q +ALLR+ E+ + E
Sbjct: 74 LTDSELEDPVSSNELIQTSCHLLTSVLT-QLQTNLDKLKDSHQ--KALLRIQELEKKVSE 130
Query: 475 LSK 483
LSK
Sbjct: 131 LSK 133
>SPAC1D4.02c |||human GRASP protein homolog |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 345
Score = 27.1 bits (57), Expect = 2.7
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = +1
Query: 148 HKLRKEGYNLDRQVRAIQREEEKIKRSL----KEAATKNDKQ 261
HK +G D +++ EEEK+ R L K+A++ ND Q
Sbjct: 275 HKKSHKGAIQDSSIQSYLDEEEKLSRELDHKTKDASSTNDSQ 316
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 27.1 bits (57), Expect = 2.7
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +1
Query: 157 RKEGYNLDRQVRAIQREEEKIKRSLKEAATKNDKQVCTILAKEIIR 294
+KE L R+ QRE+EK R ++ A K K++ L KE IR
Sbjct: 92 QKEAERLKREKERQQREQEKKLREQEKIAAKKMKEL-EKLEKERIR 136
>SPBC6B1.09c |nbs1||Mre11 complex subunit Nbs1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 26.6 bits (56), Expect = 3.6
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +1
Query: 43 KSCENLSFK*TDIAKMGLFGKSPERNPKEMVNEWSHKLRKEGYNLDRQVRAIQREEEK 216
K+ ENLS + +FGK PE N S + +K G N ++ +++ +K
Sbjct: 362 KTLENLSIM-DFVQPKQMFGKEPEGYLSNQSNNGSAQNKKSGDNSEKTKNSLKSSSKK 418
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 26.6 bits (56), Expect = 3.6
Identities = 17/75 (22%), Positives = 37/75 (49%)
Frame = +1
Query: 199 QREEEKIKRSLKEAATKNDKQVCTILAKEIIRSRKAINKIYTSKAHLNSVQLQMKNQLAT 378
+R++E+ + ++E K DK+ LAKE R R+ ++ +A +++ + + +
Sbjct: 581 KRKQERELKKIREKEKKRDKKKQLKLAKEEERQRREAERL-AEQAAQKALEAKRQEEARK 639
Query: 379 LRVAGSLQKSTEVMQ 423
R L++ E Q
Sbjct: 640 KREEQRLKREQEKKQ 654
>SPAC17G6.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 433
Score = 26.6 bits (56), Expect = 3.6
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +1
Query: 127 EMVNEWSHKLRKEGYNLDRQVRAIQREEEKIKRSLKEAATKNDKQ 261
E N H L+ L++Q+ IQR+EE++ +L++ A ++ +Q
Sbjct: 14 EYQNVQDHSLQMALEELNQQIEVIQRQEEQL--ALRKKAIEDARQ 56
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 26.6 bits (56), Expect = 3.6
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +1
Query: 160 KEGYNLDRQVRAIQREEEKIKRSLKEAAT--KNDKQVCTILAKEIIRSRKAINKIYTSKA 333
KE +L + R+IQ EEK+ SLK + T + Q+ +E++ +++ + +
Sbjct: 619 KEALDLSVKERSIQ--EEKLNESLKTSKTNLEEQTQLAEKYHEELLDNQQKLYDLRIELD 676
Query: 334 HLNSVQLQMKNQLATLR 384
+ S QM+ ++ LR
Sbjct: 677 YTKSNCKQMEEEMQVLR 693
>SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 413
Score = 25.8 bits (54), Expect = 6.3
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 330 STSQLSTITNEESIGYLKSCWIVAEVNRGDASNASSVTSPRSS 458
ST+ + T+ S S + + +ASN SVTSP SS
Sbjct: 150 STTLTPSTTDSSSTDVSSSDSVSTSASSSNASNTVSVTSPASS 192
>SPBC11B10.01 |alg2|SPBC32H8.14|mannosyltransferase complex subunit
Alg2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 511
Score = 25.8 bits (54), Expect = 6.3
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 350 CTELRCALLVYILLIAFLDLMISFASIVHTCLSFLVAAS 234
C+ LR L ILL ++ + TC+ FL+ AS
Sbjct: 91 CSSLRQVYLTMILLTNYMHFDAIIVDQLSTCVPFLLLAS 129
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 25.8 bits (54), Expect = 6.3
Identities = 15/72 (20%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +1
Query: 94 LFGKSPERNPKEM--VNEWSHKLRKEGYNLDRQVRAIQREEEKIKRSLKEAATKNDKQVC 267
+FG+ + KE + K+++ +D+ A+ ++ + K T ND+ C
Sbjct: 3100 IFGRDANKLSKEKSRIENGFKKIKETSQGIDKFKEALSDQQNVLFSKTK---TANDRLQC 3156
Query: 268 TILAKEIIRSRK 303
I K+ + ++K
Sbjct: 3157 IIQTKQAVEAKK 3168
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 25.4 bits (53), Expect = 8.4
Identities = 14/46 (30%), Positives = 28/46 (60%)
Frame = +1
Query: 127 EMVNEWSHKLRKEGYNLDRQVRAIQREEEKIKRSLKEAATKNDKQV 264
E+++ KLR+ L ++RA++RE+++ + +AA K +QV
Sbjct: 414 EVLDNLERKLRQ----LRVEIRALEREKDEASKERLKAARKEAEQV 455
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.129 0.353
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,491,337
Number of Sequences: 5004
Number of extensions: 42615
Number of successful extensions: 183
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 343230174
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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