Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22j11
(728 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0057 + 476172-476283,476337-476449,476532-476634,477089-47... 152 3e-37
07_03_0370 - 17366063-17366197,17367445-17367483,17367930-173680... 133 1e-31
10_08_0366 - 17232010-17232061,17232546-17232601,17232692-172327... 63 3e-10
11_08_0073 - 28155156-28155296,28155422-28155682,28155858-281559... 62 3e-10
01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,117... 32 0.54
04_04_0566 + 26273708-26273805,26274855-26274983,26275581-262756... 31 0.71
02_05_1166 - 34633770-34634301,34634559-34635181,34635279-34637216 31 0.71
04_04_0262 - 24024451-24025080,24025421-24026320 31 0.94
06_01_0801 - 5993726-5994160,5994811-5994969,5995071-5995211,599... 30 1.6
10_02_0128 + 5567202-5568107,5568587-5568968,5570356-5570423,557... 29 3.8
03_06_0454 + 34044351-34044499,34045495-34045510,34045640-340458... 29 3.8
07_01_0463 + 3502708-3503535 28 8.7
02_05_0925 - 32768815-32769654 28 8.7
>03_01_0057 +
476172-476283,476337-476449,476532-476634,477089-477210,
477303-477497,477627-477701,478082-478179,478328-478421
Length = 303
Score = 152 bits (368), Expect = 3e-37
Identities = 79/186 (42%), Positives = 112/186 (60%), Gaps = 12/186 (6%)
Frame = +1
Query: 109 PERNPKEMVNEWSHKLRKEGYNLDRQVRA------------IQREEEKIKRSLKEAATKN 252
P+ P++ + EW +LR EG N+DRQ+RA +QREE+K+++S++EAA +N
Sbjct: 10 PKPTPQQQLREWQRRLRNEGRNIDRQIRAMMLMVESGASADVQREEKKVEKSIREAAKRN 69
Query: 253 DKQVCTILAKEIIRSRKAINKIYTSKAHLNSVQLQMKNQLATLRVAGSLQKSTEVMQAMQ 432
D LAKE++RSRKA+N++Y +KA LNS+ + + +AT R G L KSTEVM+ +
Sbjct: 70 DIGSAKALAKEVVRSRKAVNRLYENKAQLNSISMHLGEIVATARTVGHLSKSTEVMKLVN 129
Query: 433 ALLRLPEVAATMQELSKEMMKAGIIEEMLXXXXXXXXXXXXXXXXXXXXVDKVLWELTQG 612
L++ PEVAATMQE SKEM KAG++EEM+ VDKVL +
Sbjct: 130 NLMKAPEVAATMQEFSKEMTKAGVMEEMVNDAVDSALDNEDIEEEIEEEVDKVLSAIAGE 189
Query: 613 KLGEAP 630
E P
Sbjct: 190 TASELP 195
>07_03_0370 -
17366063-17366197,17367445-17367483,17367930-17368001,
17368287-17368478,17368660-17368781,17369394-17369496,
17370786-17370836,17371199-17371275,17371646-17371757
Length = 300
Score = 133 bits (322), Expect = 1e-31
Identities = 73/179 (40%), Positives = 104/179 (58%), Gaps = 17/179 (9%)
Frame = +1
Query: 109 PERNPKEMVNEWSHKLRKEGYNLDRQVRAIQREEEKIKRSLKEAATKNDKQVCTIL---- 276
P P++ + EW KLR E LDRQ+R +QREE+ +++S++EAA +ND +L
Sbjct: 10 PRPTPQQQLREWQRKLRNECRVLDRQIRDVQREEKNVEKSIREAAKRNDIGSAKLLSNYE 69
Query: 277 -------------AKEIIRSRKAINKIYTSKAHLNSVQLQMKNQLATLRVAGSLQKSTEV 417
AKE++RSR+A+N++Y +KA LNSV + + +AT R G L KS EV
Sbjct: 70 QRTLLVLYPTMALAKELVRSRRAVNRLYENKAQLNSVSMHLGEIVATARTVGHLSKSAEV 129
Query: 418 MQAMQALLRLPEVAATMQELSKEMMKAGIIEEMLXXXXXXXXXXXXXXXXXXXXVDKVL 594
M+ + L++ PE+AATMQE SKEM KAG++EEM+ VDKVL
Sbjct: 130 MKIVNNLMKAPELAATMQEFSKEMTKAGVMEEMVNDAVDSALDSEDMEEEIEEEVDKVL 188
>10_08_0366 -
17232010-17232061,17232546-17232601,17232692-17232727,
17232861-17232941,17233060-17233131,17233394-17233465,
17233555-17233659,17233754-17233804,17234075-17234109,
17234692-17234736,17234940-17234973
Length = 212
Score = 62.9 bits (146), Expect = 3e-10
Identities = 34/144 (23%), Positives = 68/144 (47%)
Frame = +1
Query: 88 MGLFGKSPERNPKEMVNEWSHKLRKEGYNLDRQVRAIQREEEKIKRSLKEAATKNDKQVC 267
M F K P P+E + +L ++R + +Q EE+++ +K A ++
Sbjct: 1 MNPFAKKP--TPREAIRSSKRELTNATRGIERDIGTLQLEEKRLVAEIKRTAKTGNEAAT 58
Query: 268 TILAKEIIRSRKAINKIYTSKAHLNSVQLQMKNQLATLRVAGSLQKSTEVMQAMQALLRL 447
ILA+++IR R+ I+ + S+A + + + A VA +Q +++ M A+ +
Sbjct: 59 RILARQLIRLRQQISNLQGSRAQIRGIATHTQAMHANTSVAAGMQSASKAMGALNKQMDP 118
Query: 448 PEVAATMQELSKEMMKAGIIEEML 519
+ MQE K+ + + EM+
Sbjct: 119 AKQMKVMQEFQKQSAQMDMTNEMM 142
>11_08_0073 -
28155156-28155296,28155422-28155682,28155858-28155962,
28156563-28156693,28156905-28156941
Length = 224
Score = 62.5 bits (145), Expect = 3e-10
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 8/176 (4%)
Frame = +1
Query: 154 LRKEGYNLDRQVRAIQRE-------EEKIKRSLKEAATKNDKQVCTILAKEIIRSRKAIN 312
LR+ LD+ +R I+RE E+K+ +K+ A + I+AK++IR+R I
Sbjct: 15 LRENKRMLDKSIREIERERQGLQAQEKKLIAEIKKVAKQGQMGAVKIMAKDLIRTRHQIT 74
Query: 313 KIYTSKAHLNSVQLQMKNQLATLRVAGSLQKSTEVMQAMQALLRLPEVAATMQELSKEMM 492
K Y K+ L V L+++ +T + +++ T+ M+ M + LP + M+E +
Sbjct: 75 KFYALKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMRQMNRQMNLPALQKIMREFEIQNE 134
Query: 493 KAGIIEEMLXXXXXXXXXXXXXXXXXXXXVDKVLWELTQGKLGE-APAPPTSVGAP 657
K I+ + V++VL E+ E AP T+V AP
Sbjct: 135 KMEIVSSTMNDAIDDALEGDEEEEETEELVNQVLDEIGIDVNSELVGAPSTAVAAP 190
>01_01_0128 -
1167904-1168749,1168790-1168863,1169419-1169491,
1171148-1171398,1171442-1171687,1172220-1172415,
1172796-1172876,1172966-1173169,1173671-1173880,
1173953-1174174,1174437-1174480,1174974-1175052,
1175066-1175227,1175337-1175564,1175786-1175815,
1175905-1176273,1176356-1176571,1177202-1177683,
1177930-1177975
Length = 1352
Score = 31.9 bits (69), Expect = 0.54
Identities = 24/118 (20%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Frame = +1
Query: 154 LRKEGYNLDRQVRAIQREEEKIKRSLKEAATKNDKQVCTILAKEIIRSRKAINKIYTSKA 333
+ K +L+RQ+ ++EEEK + S+ + + ++++ +L +R ++ I + K
Sbjct: 612 IEKRKEDLERQILEKEKEEEKKRLSVLKKSAEDER--IRLLNDVKLREQERIRRQLVEKE 669
Query: 334 HLNSVQLQMKNQLATLRVAGSLQKSTEVMQAMQALLRLP--EVAATMQELSKEMMKAG 501
+ + +L ++ Q+ + G + + +A++ L E QE+ K++ K G
Sbjct: 670 KIEAEEL-LQKQIKEIAKRGGKKPVLQGEVTKEAVMELAMNEQFKERQEMEKKLQKTG 726
>04_04_0566 +
26273708-26273805,26274855-26274983,26275581-26275685,
26275794-26275869,26276437-26276511,26276638-26276740,
26276879-26277008,26277266-26277363,26277920-26277996,
26278262-26278375,26278984-26279103,26279533-26279661,
26279946-26280024,26280757-26280875
Length = 483
Score = 31.5 bits (68), Expect = 0.71
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -1
Query: 302 FLDLMISFASIVHTCL-SFLVAASFSDRLIFSSSLWIALTCLSKLYPSLRSLCDHSFTIS 126
FL + F + L F+ S + L+F++ + CL + PSLR L T++
Sbjct: 342 FLGAIFCFGAFCFKSLYGFIPFFSVGELLVFATQAPVNYVCLHCVKPSLRPLSMAMSTVA 401
Query: 125 LGLRSGDLPKRPIFAI 78
+ + GD+P P+ +
Sbjct: 402 IHI-FGDVPSSPLVGL 416
>02_05_1166 - 34633770-34634301,34634559-34635181,34635279-34637216
Length = 1030
Score = 31.5 bits (68), Expect = 0.71
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1
Query: 133 VNEWSHKLRKEGYNLDRQVRAIQREEEKIKRSLKEAATKNDKQVCTILAKEIIRSRKAIN 312
+N++ KL ++ L+ +V+ I + +K K L E KQ+ + + KEI KAI+
Sbjct: 359 LNKYPSKLHEKLAALEGRVQKIATDIKKTKEMLDENNPDEPKQILSNIQKEITAIEKAIS 418
Query: 313 KI 318
+
Sbjct: 419 HV 420
>04_04_0262 - 24024451-24025080,24025421-24026320
Length = 509
Score = 31.1 bits (67), Expect = 0.94
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 4/124 (3%)
Frame = +1
Query: 142 WSHKLRKEGYNLDRQVRAIQREEEKI----KRSLKEAATKNDKQVCTILAKEIIRSRKAI 309
W L + + L+R+ R + E++ K A+ + D V +L + A
Sbjct: 229 WVDTLSGKRWRLERRFRQLDALYERVIDDHLNKRKHASDEEDDLVDVLLR---LHGDPAH 285
Query: 310 NKIYTSKAHLNSVQLQMKNQLATLRVAGSLQKSTEVMQAMQALLRLPEVAATMQELSKEM 489
+ S++H+ + L + +AGS + V AM L+R P+V A Q + +
Sbjct: 286 RSTFGSRSHIKGI-------LTDMFIAGSDTSAVTVQWAMTELVRNPDVLAKAQHEVRRV 338
Query: 490 MKAG 501
+ AG
Sbjct: 339 VAAG 342
>06_01_0801 -
5993726-5994160,5994811-5994969,5995071-5995211,
5995999-5996097,5996180-5996542,5996929-5997150,
5997257-5997448,5997997-5998056,5998162-5998378,
5998471-5998523,5999013-5999084,5999928-6000113,
6000986-6001132,6002902-6003075,6003149-6003300,
6004269-6004360,6004549-6004710,6004875-6005053,
6005173-6005304,6005454-6005507,6006082-6006191,
6006317-6006487,6006577-6006663,6008488-6008611,
6009355-6009564
Length = 1330
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Frame = +1
Query: 124 KEMVNEW---SHKLRKEGYNLDRQVRAIQREEEKIKRSLKEAATKNDKQVCTILAKEIIR 294
++ + +W ++ RKE ++ +++V +++E +K SLKEA ND+ CT+L E+
Sbjct: 482 RDTIKKWKDVANDSRKELHDKEKEVLDLRQEVLGLKLSLKEA---NDQ--CTLLFNEV-- 534
Query: 295 SRKAINKIYTSKAHLNSVQLQM 360
+KA T +A L S L +
Sbjct: 535 -QKAWRVSSTLQADLKSENLML 555
>10_02_0128 +
5567202-5568107,5568587-5568968,5570356-5570423,
5570899-5571034,5571206-5571283,5571623-5571747
Length = 564
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 358 MKNQLATLRVAGSLQKSTEVMQAMQALLRLPEVAATMQELSKEMM 492
M+ L L V GS +T V AM LL+ PE+ T+Q+ K ++
Sbjct: 297 MRALLTDLFVGGSDSTATTVEWAMAELLQNPEIMKTLQQEIKMVL 341
>03_06_0454 +
34044351-34044499,34045495-34045510,34045640-34045862,
34045969-34046092,34046168-34046294,34046821-34046882,
34046972-34048023,34048167-34048556,34048667-34052628,
34052710-34052796,34052885-34053004,34053096-34053152
Length = 2122
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +1
Query: 178 DRQVRAIQREEEKIK-RSLKEAATKNDKQVCTILAKEIIRSRKAINKIYTSKAHLNSVQL 354
DR R + K+K R +E+ KN ++C +EII S++ I Y+S+ + +L
Sbjct: 241 DRSSRKVPPRTTKLKYRYPRESDHKNISRICREHLQEIISSQQKIFSNYSSRYYHPKFRL 300
Query: 355 QMKNQLAT 378
++ A+
Sbjct: 301 TESSETAS 308
>07_01_0463 + 3502708-3503535
Length = 275
Score = 27.9 bits (59), Expect = 8.7
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = +1
Query: 205 EEEKIKRSLKEAATKNDKQVCTILAKEIIRSRKAINKIYTSKAHLNSVQLQMKNQLATLR 384
EEE+ K+ K+ K DK+ AK + K KI +A + Q+K QL
Sbjct: 162 EEEEGKKKEKKKKDKGDKEKTNDPAKLKAKLEKIDTKIQDLQAKKEDILRQLKEQLKEEL 221
Query: 385 VAGSLQKSTE 414
G + + E
Sbjct: 222 EGGKSKNAIE 231
>02_05_0925 - 32768815-32769654
Length = 279
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 417 DASNASSVTSPRSSGYDAGAEQG 485
DA+N S+VTS S+G D G + G
Sbjct: 57 DAANGSTVTSEGSNGGDGGTKNG 79
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.129 0.353
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,070,768
Number of Sequences: 37544
Number of extensions: 264338
Number of successful extensions: 1087
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -