Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22j10
         (351 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF125461-6|AAK18992.1|   98|Caenorhabditis elegans Insulin relat...    30   0.54 
AL032632-11|CAJ80824.1|  462|Caenorhabditis elegans Hypothetical...    29   1.2  
AL032632-10|CAA21581.1|  475|Caenorhabditis elegans Hypothetical...    29   1.2  
Z73971-10|CAA98251.1|  838|Caenorhabditis elegans Hypothetical p...    27   5.0  
U33934-1|AAA96507.1|  838|Caenorhabditis elegans MEC-9L protein.       27   5.0  
U33933-1|AAA96506.1|  838|Caenorhabditis elegans MEC-9L protein.       27   5.0  
Z99281-16|CAB16530.2|  404|Caenorhabditis elegans Hypothetical p...    26   8.7  
U41026-6|AAA82353.1| 1081|Caenorhabditis elegans Hypothetical pr...    26   8.7  

>AF125461-6|AAK18992.1|   98|Caenorhabditis elegans Insulin related
           protein 32 protein.
          Length = 98

 Score = 29.9 bits (64), Expect = 0.54
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +2

Query: 137 DLQSMMDMLRGASGSSSLPTRSESRR 214
           DLQ++   L G  GSSSL  +S SRR
Sbjct: 23  DLQNLHRFLEGLQGSSSLAVKSRSRR 48


>AL032632-11|CAJ80824.1|  462|Caenorhabditis elegans Hypothetical
           protein Y11D7A.3b protein.
          Length = 462

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +1

Query: 34  FAWSFIWIVVVTTMSFTYCFFTD 102
           FA SF+  V  TT+SFT+ F TD
Sbjct: 258 FAVSFLMTVYPTTLSFTHAFKTD 280


>AL032632-10|CAA21581.1|  475|Caenorhabditis elegans Hypothetical
           protein Y11D7A.3a protein.
          Length = 475

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +1

Query: 34  FAWSFIWIVVVTTMSFTYCFFTD 102
           FA SF+  V  TT+SFT+ F TD
Sbjct: 271 FAVSFLMTVYPTTLSFTHAFKTD 293


>Z73971-10|CAA98251.1|  838|Caenorhabditis elegans Hypothetical
           protein C50H2.3 protein.
          Length = 838

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 45  FYMDCGGHDNELYILFFHR 101
           FY  CGG+DN+ Y L   R
Sbjct: 132 FYYGCGGNDNKFYSLHMCR 150


>U33934-1|AAA96507.1|  838|Caenorhabditis elegans MEC-9L protein.
          Length = 838

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 45  FYMDCGGHDNELYILFFHR 101
           FY  CGG+DN+ Y L   R
Sbjct: 132 FYYGCGGNDNKFYSLHMCR 150


>U33933-1|AAA96506.1|  838|Caenorhabditis elegans MEC-9L protein.
          Length = 838

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 45  FYMDCGGHDNELYILFFHR 101
           FY  CGG+DN+ Y L   R
Sbjct: 132 FYYGCGGNDNKFYSLHMCR 150


>Z99281-16|CAB16530.2|  404|Caenorhabditis elegans Hypothetical
           protein Y57G11C.31 protein.
          Length = 404

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 11/29 (37%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
 Frame = +2

Query: 35  LRGLLYGLWWSRQ*ALH-IVFSQMTWLAY 118
           LR LLY +W S +  L+ ++F+++T +A+
Sbjct: 13  LRNLLYTIWTSTECVLYKVLFNRVTLIAF 41


>U41026-6|AAA82353.1| 1081|Caenorhabditis elegans Hypothetical
           protein C28G1.4 protein.
          Length = 1081

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +2

Query: 122 SKFTVDLQSMMDMLRGASGSSSLPTRS 202
           S+F ++++ ++  +   SGSSSLPT S
Sbjct: 286 SQFQIEMEPLLLEIPTPSGSSSLPTSS 312


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,016,036
Number of Sequences: 27780
Number of extensions: 156796
Number of successful extensions: 423
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 423
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 472561672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)