Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22j03
         (748 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82282-5|CAB05270.1|  555|Caenorhabditis elegans Hypothetical pr...    30   2.0  
U50199-3|AAA91263.1|  555|Caenorhabditis elegans Hypothetical pr...    29   2.6  
AM748820-1|CAO72174.1|  555|Caenorhabditis elegans hexosaminidas...    29   2.6  
Z81520-1|CAB04223.1|  399|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z92817-6|CAB60324.1|  384|Caenorhabditis elegans Hypothetical pr...    28   8.1  
Z83111-7|CAB05534.2|  384|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z82282-5|CAB05270.1|  555|Caenorhabditis elegans Hypothetical
           protein T07G12.5 protein.
          Length = 555

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
 Frame = +2

Query: 104 NLCQKLSRPTSKRIYVSHSRCVLQ---CMGPQLWPYPIGYTLFSKNLVAMSILKLEYKFQ 274
           NLC K+S+ +      ++   V++   C+   LW    G T +++N+  MS+ K+  +  
Sbjct: 298 NLCAKISKQSRPPPSNTNRAFVVEGIGCILAALWGVGTGVTTYAENIAIMSVTKVTSRI- 356

Query: 275 SLPSENVHRHLAEAFKLFIGDLARLEK--IGREMKNGTC 385
           ++    V   LA     F   L+ + +  IG  +  G C
Sbjct: 357 TMQMAGVFLILAGVISKFAAFLSMIPEPIIGGLLAMGVC 395


>U50199-3|AAA91263.1|  555|Caenorhabditis elegans Hypothetical
           protein T14F9.3 protein.
          Length = 555

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +2

Query: 515 LSSSSFCGARHGLETLNQMILLDQLTG-YLITLSHIIVKDAPSHKYRGLMIDTGRNYI 685
           +++ +  GA   +E+L+ ++  D  +  Y I    I   D P    RG+MID+ R+++
Sbjct: 129 INAQTVWGALRAMESLSHLVFYDHKSQEYQIRTVEIF--DKPRFPVRGIMIDSSRHFL 184


>AM748820-1|CAO72174.1|  555|Caenorhabditis elegans hexosaminidase
           protein.
          Length = 555

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +2

Query: 515 LSSSSFCGARHGLETLNQMILLDQLTG-YLITLSHIIVKDAPSHKYRGLMIDTGRNYI 685
           +++ +  GA   +E+L+ ++  D  +  Y I    I   D P    RG+MID+ R+++
Sbjct: 129 INAQTVWGALRAMESLSHLVFYDHKSQEYQIRTVEIF--DKPRFPVRGIMIDSSRHFL 184


>Z81520-1|CAB04223.1|  399|Caenorhabditis elegans Hypothetical
           protein F31B9.1 protein.
          Length = 399

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +2

Query: 38  GLSSFCQTLSRIFRPNAWECV-ENLCQKLSR 127
           G+SSFC  L   F  + +ECV E++  KLSR
Sbjct: 347 GISSFCCWLLPSFSKSEYECVDESMTAKLSR 377


>Z92817-6|CAB60324.1|  384|Caenorhabditis elegans Hypothetical
           protein F57G8.6 protein.
          Length = 384

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = +2

Query: 248 ILKLEYKFQSLPSENVHRHLAE--AFKLFIGDLARLEKIGREMKN 376
           ILK+  KFQ + S ++H H  +    + + G L+++ KI   ++N
Sbjct: 306 ILKICEKFQEVLSNDLHEHYVKELGMQRYSGRLSKIMKINNAIQN 350


>Z83111-7|CAB05534.2|  384|Caenorhabditis elegans Hypothetical
           protein F57G8.6 protein.
          Length = 384

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = +2

Query: 248 ILKLEYKFQSLPSENVHRHLAE--AFKLFIGDLARLEKIGREMKN 376
           ILK+  KFQ + S ++H H  +    + + G L+++ KI   ++N
Sbjct: 306 ILKICEKFQEVLSNDLHEHYVKELGMQRYSGRLSKIMKINNAIQN 350


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,211,384
Number of Sequences: 27780
Number of extensions: 367914
Number of successful extensions: 893
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)