Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22i22
         (664 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23514-11|AAM48531.1|  287|Caenorhabditis elegans Long protein 1...    31   0.73 
Z37983-2|CAA86055.1|  585|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z49968-1|CAA90258.2|  499|Caenorhabditis elegans Hypothetical pr...    28   5.1  
U64833-8|AAB04820.1|  432|Caenorhabditis elegans Hypothetical pr...    28   5.1  
Z92780-3|CAB07178.2|  289|Caenorhabditis elegans Hypothetical pr...    28   6.8  
AF099925-8|AAR12969.2|  119|Caenorhabditis elegans Hypothetical ...    27   9.0  

>U23514-11|AAM48531.1|  287|Caenorhabditis elegans Long protein 1,
           isoform c protein.
          Length = 287

 Score = 31.1 bits (67), Expect = 0.73
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +3

Query: 468 DPQSRCARRWAPWPLCYFSSILLPW-YSATTTTADTERRNRTSLTPST 608
           +PQ +C+   A  P CY     +P  Y A TTT ++   + T+  P+T
Sbjct: 210 NPQGKCSNCPANAPACYQGLCYMPKNYEAPTTTTESTTTSTTTEEPTT 257


>Z37983-2|CAA86055.1|  585|Caenorhabditis elegans Hypothetical
           protein B0393.2 protein.
          Length = 585

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 14/31 (45%), Positives = 22/31 (70%)
 Frame = +2

Query: 236 WKIVTNIDRIIAEISKLIFVHFHLRIRHLLI 328
           W ++  IDR IA ++K +FV   ++IRHLL+
Sbjct: 315 WDVLL-IDRPIAPLAKCMFVSLLVQIRHLLL 344


>Z49968-1|CAA90258.2|  499|Caenorhabditis elegans Hypothetical
           protein M110.1 protein.
          Length = 499

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 21/68 (30%), Positives = 35/68 (51%)
 Frame = +1

Query: 379 VSDKQNANIEAQLILKSLSSVVETHIRGRATRSRDAPAVGPRGLCVTSPLSCCPGTLLPR 558
           ++D +N + ++  I K LS   + ++RG+ +  RDAP++ P G C     SC  G   P 
Sbjct: 44  LTDLRNCHQDSTDIWKQLS---QENVRGKRSYGRDAPSI-PMGKC----CSCQQGKPGPT 95

Query: 559 RQRIQSGG 582
             +   GG
Sbjct: 96  GPKGPDGG 103


>U64833-8|AAB04820.1|  432|Caenorhabditis elegans Hypothetical
           protein B0507.3 protein.
          Length = 432

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
 Frame = +1

Query: 406 EAQLILKSLSSVV-----ETHIRGRATRSRDAPAVGPRGLCVTSPLSCCPGTLLPRRQRI 570
           E Q +L ++S ++      +H    A  S   P + P    VT PL   P +L P    I
Sbjct: 111 EDQQMLLNMSKLITLNQAHSHPTSIAPSSFQVPVIPPPPTLVTGPLKVAPASLAPVPMEI 170

Query: 571 QS 576
           QS
Sbjct: 171 QS 172


>Z92780-3|CAB07178.2|  289|Caenorhabditis elegans Hypothetical
           protein C45G3.3 protein.
          Length = 289

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +1

Query: 406 EAQLILKSLSSVVETHIRGRATRSRDAPAVG 498
           + Q++ KSL S     I   ATRS  APAVG
Sbjct: 165 DLQVLSKSLKSPWRDKIESNATRSVRAPAVG 195


>AF099925-8|AAR12969.2|  119|Caenorhabditis elegans Hypothetical
           protein K01A2.3 protein.
          Length = 119

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -3

Query: 437 LLKLFNISCASIFAFCLSL 381
           LL LFNI+CA+I+ F + L
Sbjct: 60  LLPLFNIACATIYQFVVQL 78


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,279,518
Number of Sequences: 27780
Number of extensions: 281635
Number of successful extensions: 864
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)