Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22i21
         (711 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0127 + 5777564-5779879                                           29   3.6  
09_02_0591 - 10997771-10998054,10998671-10999017,10999088-109992...    28   8.4  

>03_02_0127 + 5777564-5779879
          Length = 771

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -1

Query: 330 RHNSVSKKKPLDRVSVNGFPSVKKKSSNLAKGRYLYDKYKVS 205
           +H +V++K   D  S NG P   KKS+   KG  +  K K++
Sbjct: 146 KHLTVAQKTSADSGSSNGVPKFDKKSAMPVKGTIVPAKLKLA 187


>09_02_0591 -
           10997771-10998054,10998671-10999017,10999088-10999247,
           10999333-10999401,11000256-11000382,11000759-11001021,
           11001122-11001279,11001390-11001464,11002876-11002947,
           11003039-11003177,11003275-11003744,11003907-11003935
          Length = 730

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +2

Query: 209 TLYLSYKYLPLARFELFFFTLGNPFTDTRSRGFFFETE--LCRTPVPPEKNREKKNT 373
           TL+ + KYL L+  +L      +   +  S  F +ET+  +C+TPV P  +R +  T
Sbjct: 229 TLFTALKYLNLSCNQLNGTIPYSLLKNNGSIDFSYETDGNMCKTPVTPSLSRNRAVT 285


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,460,980
Number of Sequences: 37544
Number of extensions: 464107
Number of successful extensions: 1287
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1287
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)