Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22i18
(674 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72511-1|CAA96655.1| 186|Caenorhabditis elegans Hypothetical pr... 75 5e-14
Z72513-3|CAA96671.2| 127|Caenorhabditis elegans Hypothetical pr... 61 8e-10
L23651-2|ABA54424.1| 124|Caenorhabditis elegans Hypothetical pr... 33 0.19
L14745-16|AAA27916.2| 1010|Caenorhabditis elegans Kinetochore nu... 32 0.43
AF078783-5|AAC26922.1| 236|Caenorhabditis elegans Hypothetical ... 32 0.43
Z80216-5|CAB02282.1| 190|Caenorhabditis elegans Hypothetical pr... 31 0.75
L33681-1|AAA85632.1| 190|Caenorhabditis elegans neuronal calciu... 31 0.75
Z74036-5|CAA98489.3| 171|Caenorhabditis elegans Hypothetical pr... 30 1.3
AY190131-1|AAO33925.1| 171|Caenorhabditis elegans CNB-1 protein. 30 1.3
AF497824-1|AAM18102.1| 644|Caenorhabditis elegans putative Na-H... 30 1.7
Z73973-1|CAA98266.1| 357|Caenorhabditis elegans Hypothetical pr... 29 2.3
U41543-10|AAP40531.1| 374|Caenorhabditis elegans Hypothetical p... 29 4.0
U41543-9|AAB37021.2| 453|Caenorhabditis elegans Hypothetical pr... 29 4.0
AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans Prion-like-(q... 29 4.0
AF016449-3|AAG23997.2| 337|Caenorhabditis elegans Serpentine re... 28 5.3
AC024858-1|AAF60872.2| 196|Caenorhabditis elegans Hypothetical ... 28 7.0
>Z72511-1|CAA96655.1| 186|Caenorhabditis elegans Hypothetical
protein F55A11.1 protein.
Length = 186
Score = 74.9 bits (176), Expect = 5e-14
Identities = 47/126 (37%), Positives = 73/126 (57%), Gaps = 8/126 (6%)
Frame = +1
Query: 286 HYKPMGTGSFTGDSQLLHDAKHLEE--DSKVLTPAMLASMTPEELEFHYFSIHDFDRNTK 459
H +P G F G+ D H++E D KV P A+MTPE+L+FHYF++HD D+N K
Sbjct: 42 HAQP-GQQQFGGEQA--RDEHHIKEHLDGKV-DPT--ANMTPEQLQFHYFNMHDLDKNGK 95
Query: 460 LDGSEMLKAVYHTLDHESPNP---DDDSSIEPEANDLDSFI---VLVDRTLQFDDTDGDG 621
LDG E++KA+ H E+P P ++++ + L S + ++D L+ DD + DG
Sbjct: 96 LDGVELIKAITH-FHAENPGPQHTQNNANANHQPPPLPSEVELETMIDSILKDDDFNADG 154
Query: 622 YVSYPE 639
++ Y E
Sbjct: 155 FIDYGE 160
>Z72513-3|CAA96671.2| 127|Caenorhabditis elegans Hypothetical
protein T04F3.4 protein.
Length = 127
Score = 60.9 bits (141), Expect = 8e-10
Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Frame = +1
Query: 307 GSFTGDSQLLHDAKHLEEDSKVLTPAMLASMTPEELEFHYFSIHDFDRNTKLDGSEMLKA 486
G+ + + +HD +H+++ + + +T E+ FHYFS+HD +++ +DG E+LKA
Sbjct: 20 GAKFAEEKEVHDEEHIKQHLE--NKIEVEKLTEEQQRFHYFSMHDLNKDNFIDGIEILKA 77
Query: 487 VYHTLD-HESPNPDDDSSIEPEANDLDSFIVLVDRTLQFDDTDGDGYVSYPE 639
+ HT D H+S +P S E E LVD L D +GDG + Y E
Sbjct: 78 LTHTHDAHDSGHPVPVSD-EAETER------LVDAVLDDLDFNGDGVIDYGE 122
>L23651-2|ABA54424.1| 124|Caenorhabditis elegans Hypothetical
protein C29E4.14 protein.
Length = 124
Score = 33.1 bits (72), Expect = 0.19
Identities = 19/78 (24%), Positives = 43/78 (55%)
Frame = +1
Query: 406 EELEFHYFSIHDFDRNTKLDGSEMLKAVYHTLDHESPNPDDDSSIEPEANDLDSFIVLVD 585
++ +F+YF + D +++ LDG E+ K + + + D+ + ++ E ++ + +VL +
Sbjct: 53 KDRKFYYFKVGDTNQDNHLDGVELFKMI-------TEHSDEKTKMDVEMIEVQADLVLSE 105
Query: 586 RTLQFDDTDGDGYVSYPE 639
D +GDG +S+ E
Sbjct: 106 L-----DKNGDGMISFSE 118
>L14745-16|AAA27916.2| 1010|Caenorhabditis elegans Kinetochore null
protein 1 protein.
Length = 1010
Score = 31.9 bits (69), Expect = 0.43
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Frame = +1
Query: 325 SQLLHDAKHLEEDSKVLTPAMLASMTPEELEFHYFSIHD----FDRNTKLDGSEMLKAVY 492
S ++ A+ LE+D TP +LAS + ++H+ + + +LD + +LK +
Sbjct: 543 SSMIDVAQKLEDDGSSKTPVILASQSASLATKEPSALHNSSATLNNSMELDNNTLLKTMQ 602
Query: 493 HTLDHESPNPDDDSSIEPEAN-DLDSFIVLVDRTLQFDDTDGDG 621
T + + ++E +N + + F D TLQ +DT G
Sbjct: 603 ITTCEDISMVHESIAVELNSNKEQEQF---GDETLQKNDTSNTG 643
>AF078783-5|AAC26922.1| 236|Caenorhabditis elegans Hypothetical
protein H10E21.4 protein.
Length = 236
Score = 31.9 bits (69), Expect = 0.43
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 12/84 (14%)
Frame = +1
Query: 424 YFSIHDFDRNTKLDGSEMLKAVYH------TLDHE---SPNPDDDSSI---EPEANDLDS 567
YF D DRN LD SE + VY +D+E + +DD + E E D+
Sbjct: 54 YFQRFDLDRNGHLDISEFVPLVYEMSRRPVDMDYEFFKKMDLNDDGIVDKAEVEKIRKDN 113
Query: 568 FIVLVDRTLQFDDTDGDGYVSYPE 639
++D L DT+ DG ++Y E
Sbjct: 114 NDRIIDGILSIADTNRDGQLTYAE 137
>Z80216-5|CAB02282.1| 190|Caenorhabditis elegans Hypothetical
protein F10G8.5 protein.
Length = 190
Score = 31.1 bits (67), Expect = 0.75
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +1
Query: 391 ASMTPEELEFHYFSIHDFDRNTKLDGSEMLK---AVYHTLDHESPNPDDDS 534
+S TPE+ F ++D D N +D EM+K A+Y L E DDS
Sbjct: 95 SSGTPEQKLEWAFRMYDIDGNGTIDEKEMIKIIEAIYEMLGPEVTKSADDS 145
>L33681-1|AAA85632.1| 190|Caenorhabditis elegans neuronal calcium
binding protein protein.
Length = 190
Score = 31.1 bits (67), Expect = 0.75
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +1
Query: 391 ASMTPEELEFHYFSIHDFDRNTKLDGSEMLK---AVYHTLDHESPNPDDDS 534
+S TPE+ F ++D D N +D EM+K A+Y L E DDS
Sbjct: 95 SSGTPEQKLEWAFRMYDIDGNGTIDEKEMIKIIEAIYEMLGPEVTKSADDS 145
>Z74036-5|CAA98489.3| 171|Caenorhabditis elegans Hypothetical
protein F55C10.1 protein.
Length = 171
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 577 LVDRTLQFDDTDGDGYVSYPE 639
+VD+T+ F D DGDG +S+ E
Sbjct: 132 IVDKTILFHDKDGDGKISFQE 152
>AY190131-1|AAO33925.1| 171|Caenorhabditis elegans CNB-1 protein.
Length = 171
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 577 LVDRTLQFDDTDGDGYVSYPE 639
+VD+T+ F D DGDG +S+ E
Sbjct: 132 IVDKTILFHDKDGDGKISFQE 152
>AF497824-1|AAM18102.1| 644|Caenorhabditis elegans putative Na-H
exchanger isoform 2 protein.
Length = 644
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -2
Query: 568 MSLNRLPPVLLKNRHLDSDFHGLKCDRQLLTFPSR-PISYF 449
MSL R P VL+ L + G +C+ + +PSR PI+YF
Sbjct: 1 MSLLRRPWVLVVGLLLIMSYVGAECEEEEKEYPSRYPIAYF 41
>Z73973-1|CAA98266.1| 357|Caenorhabditis elegans Hypothetical
protein F25D1.2 protein.
Length = 357
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -3
Query: 327 RVASKGTCPHWFVMMVRTFHRRLPRRMM 244
+VASK C WF+ +R H + +R++
Sbjct: 323 KVASKSRCVMWFLASIRFLHHSMKKRVL 350
>U41543-10|AAP40531.1| 374|Caenorhabditis elegans Hypothetical
protein F46H5.2c protein.
Length = 374
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 289 NDGEDVPPASAPADDV 242
N GED+PPAS+PA +
Sbjct: 36 NHGEDIPPASSPATSI 51
>U41543-9|AAB37021.2| 453|Caenorhabditis elegans Hypothetical
protein F46H5.2a protein.
Length = 453
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 289 NDGEDVPPASAPADDV 242
N GED+PPAS+PA +
Sbjct: 36 NHGEDIPPASSPATSI 51
>AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 85
protein.
Length = 2203
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = -2
Query: 658 GSGRTVXQDTRHNRRRLCHQIVRFGPPAQ*MSLNRLPPVLLKNRHLDSDFHGLKCDRQLL 479
G+G Q + N HQ+ + G A + + P+LL+ ++L+ F G+ + QL
Sbjct: 12 GTGNPNFQPVQTNAGGFGHQMAQTGAAAAAAATGQYNPMLLQQQYLNFGF-GMNYNNQLF 70
Query: 478 TFPSR 464
F ++
Sbjct: 71 DFQAQ 75
>AF016449-3|AAG23997.2| 337|Caenorhabditis elegans Serpentine
receptor, class t protein15 protein.
Length = 337
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -2
Query: 205 VKDMQIWILIQSFLY*FIHSRS 140
+ +MQI IL+QSFL+ F HS S
Sbjct: 250 LSNMQIKILLQSFLFCFFHSVS 271
>AC024858-1|AAF60872.2| 196|Caenorhabditis elegans Hypothetical
protein Y71H2AL.1 protein.
Length = 196
Score = 27.9 bits (59), Expect = 7.0
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +1
Query: 577 LVDRTLQFDDTDGDGYVSYPE 639
+ DRT++ D DGDG++++ E
Sbjct: 156 IADRTMREADRDGDGFITFQE 176
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,595,451
Number of Sequences: 27780
Number of extensions: 338702
Number of successful extensions: 954
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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