Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22i18
         (674 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    24   1.2  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   2.0  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   2.0  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   6.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   6.1  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   8.1  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   8.1  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +1

Query: 376 TPAM--LASMTPEELEFHYFSIHDFDRNTKLDGSEMLKAVYHTLDHE 510
           TP M  L ++    L  +  S+HDF R+  L G++    +   LD E
Sbjct: 324 TPVMPDLNALIATGLYINDLSMHDFSRDLMLAGTQQSVELKLALDQE 370


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -1

Query: 143 FYISANSISRLNNQINRQHL 84
           F ISA  +SR++N+I+R  +
Sbjct: 26  FRISAGCVSRISNRISRNRV 45


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 592 LQFDDTDGDGYVSYPE 639
           + +DDTDGDG ++  E
Sbjct: 280 ISYDDTDGDGKLNVNE 295


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/25 (28%), Positives = 17/25 (68%)
 Frame = -1

Query: 191 NLDFNSIIFILIHSFPFYISANSIS 117
           ++  N   F+L H++P ++ +NS++
Sbjct: 225 DVGLNHFYFMLNHNYPPFMLSNSLN 249


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/25 (28%), Positives = 17/25 (68%)
 Frame = -1

Query: 191 NLDFNSIIFILIHSFPFYISANSIS 117
           ++  N   F+L H++P ++ +NS++
Sbjct: 225 DVGLNHFYFMLNHNYPPFMLSNSLN 249


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 541 LLKNRHLDSDFHGLKCDR 488
           +L+N  +DS    LKCD+
Sbjct: 135 ILRNDRIDSYKSNLKCDK 152


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = -2

Query: 433 LKNNETPILRVS 398
           LK+N+TP++R S
Sbjct: 679 LKHNDTPVVRAS 690


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,476
Number of Sequences: 438
Number of extensions: 3812
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)