Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22i12
         (710 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024771-2|AAK70659.1|  697|Caenorhabditis elegans Hypothetical ...    31   1.1  
Z47808-2|CAA87770.1|  415|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AC084154-6|AAO91684.1|  319|Caenorhabditis elegans Serpentine re...    29   3.3  
Z82268-2|CAD89737.1|  389|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z82268-1|CAB05197.3|  508|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z81135-1|CAB03453.1|  627|Caenorhabditis elegans Hypothetical pr...    28   7.6  
AY438643-1|AAR00670.1|  627|Caenorhabditis elegans abnormal DAue...    28   7.6  
AC006617-5|AAF39775.1|  325|Caenorhabditis elegans Serpentine re...    28   7.6  

>AC024771-2|AAK70659.1|  697|Caenorhabditis elegans Hypothetical
           protein Y40B10A.4 protein.
          Length = 697

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
 Frame = +1

Query: 97  MKLLQEYNNIIISATKHEIANMKDGSCDLKKKSNNSLQMNPVAS-GDNVTT---GLSAHR 264
           +KL+ E++N++I   KHEI +  D   D + K  N   MN V    D +T     ++ HR
Sbjct: 94  LKLIMEHHNVVIEQFKHEIVD-DDNDEDFQNKCIN--DMNDVLKFADCLTVSEMNITGHR 150

Query: 265 LKEELPLLV 291
              EL  L+
Sbjct: 151 TISELAELL 159


>Z47808-2|CAA87770.1|  415|Caenorhabditis elegans Hypothetical
           protein D2013.2 protein.
          Length = 415

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +1

Query: 175 CDLKKKSN-NSLQMNPVASGDNVTTGLSAHRLKEELPLLVPCCEGR 309
           C+ + K N  +  + P+A    + TG++A  L+E L LLV   + R
Sbjct: 352 CNARMKDNPQNFNLTPLAIPHEIHTGITAMHLQETLGLLVTSGQNR 397


>AC084154-6|AAO91684.1|  319|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 64 protein.
          Length = 319

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 203 ELLDFFFRSHEPSFILAISCLVADIIILLY 114
           + L +FFR + P F L   CL   + IL+Y
Sbjct: 2   DFLQYFFRFYWPMFSLTCLCLFITLYILIY 31


>Z82268-2|CAD89737.1|  389|Caenorhabditis elegans Hypothetical
           protein F52B11.1b protein.
          Length = 389

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +1

Query: 295 CCEGRELQADEHTGHLMVSGYRRSWTSAMPEVSVGISE 408
           C E R+L  DE   HL V GY + W   M E +  +SE
Sbjct: 213 CPEHRKL-GDEQ--HLKVCGYPKKWEDGMIETAKTVSE 247


>Z82268-1|CAB05197.3|  508|Caenorhabditis elegans Hypothetical
           protein F52B11.1a protein.
          Length = 508

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +1

Query: 295 CCEGRELQADEHTGHLMVSGYRRSWTSAMPEVSVGISE 408
           C E R+L  DE   HL V GY + W   M E +  +SE
Sbjct: 332 CPEHRKL-GDEQ--HLKVCGYPKKWEDGMIETAKTVSE 366


>Z81135-1|CAB03453.1|  627|Caenorhabditis elegans Hypothetical
           protein W01G7.1 protein.
          Length = 627

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 15/67 (22%), Positives = 27/67 (40%)
 Frame = +1

Query: 328 HTGHLMVSGYRRSWTSAMPEVSVGISEDLVRSGLSAISVKHDSALQCLSMSNCETLQVPP 507
           H  H+    Y   W       S  + ED+++SG      K+   ++C+   +CE    P 
Sbjct: 189 HVVHVNFIDYCSEWLE-----SDDLEEDVMQSGTHGYWYKNRRNMRCIECQHCEGKFTPT 243

Query: 508 GIVKHRN 528
             + H +
Sbjct: 244 DFIMHHH 250


>AY438643-1|AAR00670.1|  627|Caenorhabditis elegans abnormal DAuer
           Formation DAF-5,a Ski oncogene homolog involved in a
           neuronal TGF betapathway (71.0 kD) (daf-5) protein.
          Length = 627

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 15/67 (22%), Positives = 27/67 (40%)
 Frame = +1

Query: 328 HTGHLMVSGYRRSWTSAMPEVSVGISEDLVRSGLSAISVKHDSALQCLSMSNCETLQVPP 507
           H  H+    Y   W       S  + ED+++SG      K+   ++C+   +CE    P 
Sbjct: 189 HVVHVNFIDYCSEWLE-----SDDLEEDVMQSGTHGYWYKNRRNMRCIECQHCEGKFTPT 243

Query: 508 GIVKHRN 528
             + H +
Sbjct: 244 DFIMHHH 250


>AC006617-5|AAF39775.1|  325|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 65 protein.
          Length = 325

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -1

Query: 203 ELLDFFFRSHEPSFILAISCLVADIIILLYS 111
           ++L + FR + P F L   CL + + IL+Y+
Sbjct: 2   DILQYLFRFYWPPFYLLSLCLFSTMYILIYN 32


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,565,049
Number of Sequences: 27780
Number of extensions: 342324
Number of successful extensions: 910
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)