Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22i11
(710 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1851.03 |ckb1||CK2 family regulatory subunit |Schizosaccharo... 145 5e-36
SPBC2G5.02c |||CK2 family regulatory subunit |Schizosaccharomyce... 114 1e-26
SPAC1B3.16c |vht1||vitamin H transporter Vth1|Schizosaccharomyce... 28 1.5
SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces p... 27 2.0
SPBC36.11 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 27 2.0
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 27 2.6
SPAC1296.04 |mug65||spore wall assembly protein |Schizosaccharom... 26 4.6
SPCPB16A4.06c |||sequence orphan|Schizosaccharomyces pombe|chr 3... 26 6.1
SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces p... 25 8.1
>SPAC1851.03 |ckb1||CK2 family regulatory subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 231
Score = 145 bits (352), Expect = 5e-36
Identities = 58/102 (56%), Positives = 77/102 (75%)
Frame = +2
Query: 107 RGISQMLDKFQSGDFGYCPRVYCECQPMLPIGLSDVPAEAMVKLYCPRCMDVYTPKSSRH 286
+G+ +ML+K++ DFG+CPRV C QPMLP+GLSD+ VKLYCPRC DVYTPKS RH
Sbjct: 96 QGLYKMLEKYKKCDFGHCPRVLCNGQPMLPVGLSDIAHTKSVKLYCPRCEDVYTPKSQRH 155
Query: 287 HHTDGAYFGTGFPHMVFMVHPDKRPKRPASQFVPRLYGFKIH 412
DGAYFGT FPHM+F V+P+ + +++PR++GFK+H
Sbjct: 156 ASIDGAYFGTSFPHMLFQVYPELAVPKSQERYIPRIFGFKVH 197
>SPBC2G5.02c |||CK2 family regulatory subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 254
Score = 114 bits (275), Expect = 1e-26
Identities = 51/111 (45%), Positives = 72/111 (64%), Gaps = 3/111 (2%)
Frame = +2
Query: 98 IMRRGISQMLDKFQSGDFGYCPRVYCECQPMLPIGLSDVPAEAMVKLYCPRCMDVYTPKS 277
I R G+ QM +K+ G FG CPRV C +LP GLSD+ + V L+CP C+D+Y P S
Sbjct: 119 ITRTGLHQMAEKYSMGIFGCCPRVNCCYTHVLPAGLSDIVGKMPVMLFCPNCLDLYAPSS 178
Query: 278 SRHHHTDGAYFGTGFPHMVFMVHPDKRPKR--PASQ-FVPRLYGFKIHPLA 421
SR+ + DG++FG FPH+ F +P+ PKR P + + PR+YGFK+ L+
Sbjct: 179 SRYKNIDGSFFGATFPHLFFESYPELNPKRSIPCGKIYQPRIYGFKVSELS 229
>SPAC1B3.16c |vht1||vitamin H transporter Vth1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 568
Score = 27.9 bits (59), Expect = 1.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 25 IYALFISYAMNCCFESGICLSYTKYNEKGH 114
I L+I Y ++CC + LS+T +GH
Sbjct: 86 IPCLWILYFLSCCLRFTVSLSFTMNTAQGH 115
>SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 749
Score = 27.5 bits (58), Expect = 2.0
Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = +2
Query: 8 KTKKIEFTHYLLATP*IAVSNREFVSLTPNIMRRGISQMLDKFQSGDFGYCPRVYCECQP 187
++KKI T + L P AVS + +R S M+ KF + C ++C +
Sbjct: 170 RSKKIPLTEFALRYPESAVSKLLDQASIERTLRAQASAMIVKFSRPEDSACLPLHCLLRE 229
Query: 188 MLPIGL-SDVPAEAMVKLYCPRCMDVYTPKS 277
+L + + + + RC+ +Y S
Sbjct: 230 VLAMQVFKRITTHCSSPRFVNRCIILYFSSS 260
>SPBC36.11 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 343
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 398 GFKIHPLAYQIQQAAANSKPPQRSLSYNNETKTSSNI 508
G+++H + + NS PQRS S+ N+T+ SS++
Sbjct: 162 GYQMHSTPWA--SSPRNSTIPQRSQSFYNDTRRSSDL 196
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -2
Query: 193 QHRLAFTVYTWAISKIPRLELIQHLTNAPSHYIWCKRDKF 74
Q R +V + K EL +H+ N ++ KRD F
Sbjct: 2245 QRRWFLSVVVQLLEKSSSFELCEHILNVTKEWVIVKRDSF 2284
>SPAC1296.04 |mug65||spore wall assembly protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 26.2 bits (55), Expect = 4.6
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 217 GDVRQTNWQHRLAFTVYTW 161
GDV ++ WQ+ +FT+ W
Sbjct: 76 GDVDESGWQYGFSFTMNNW 94
>SPCPB16A4.06c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 126
Score = 25.8 bits (54), Expect = 6.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 159 AHVYTVNANLCCQLVCRTSPPKRW*SCT 242
A+V+ N + TSPP+RW +CT
Sbjct: 8 ANVHFEGQNQSSEGQLSTSPPRRWRNCT 35
>SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 390
Score = 25.4 bits (53), Expect = 8.1
Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 8/89 (8%)
Frame = +2
Query: 263 YTPKSSRHHHTDGAYFGTG----FPHMVFMVHPDKR----PKRPASQFVPRLYGFKIHPL 418
+T + + ++ TD G F H + HP + + P+ P + P
Sbjct: 275 FTSQRNPNYSTDSFLLGQSLSDPFNHTLQSFHPYESLFSAGQPPSLPISPSTSQNSVQPF 334
Query: 419 AYQIQQAAANSKPPQRSLSYNNETKTSSN 505
+ IQQ + +PP S + N+ T N
Sbjct: 335 PFSIQQPPLHLEPPLSSNTLNSSTLPQPN 363
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,760,375
Number of Sequences: 5004
Number of extensions: 57509
Number of successful extensions: 162
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 161
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 331187010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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