Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22i09
         (351 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92817-5|CAE17970.2|  305|Caenorhabditis elegans Hypothetical pr...    27   2.9  
U40951-4|AAG01568.1|  756|Caenorhabditis elegans Temporarily ass...    27   5.0  
U64846-8|AAG24109.1|  331|Caenorhabditis elegans Serpentine rece...    26   6.6  
U64846-6|AAG24115.3|  336|Caenorhabditis elegans Serpentine rece...    26   6.6  
AL023837-3|CAB63348.2|  283|Caenorhabditis elegans Hypothetical ...    26   6.6  
AF106579-8|AAC78201.1|  710|Caenorhabditis elegans Hypothetical ...    26   8.7  

>Z92817-5|CAE17970.2|  305|Caenorhabditis elegans Hypothetical
           protein W08G11.5 protein.
          Length = 305

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +2

Query: 83  YHSLNGSSMSISYCSYVYR 139
           Y+S  GSSMSI  C ++YR
Sbjct: 94  YNSCYGSSMSIFACHFIYR 112


>U40951-4|AAG01568.1|  756|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 130 protein.
          Length = 756

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = +3

Query: 237 RLKSIYVYDIVLSLNVNVCSIIVSVEPN 320
           R+ S YV   V++ N ++CS I+S++PN
Sbjct: 218 RMSSFYVV-FVVNTNDDLCSEILSIKPN 244


>U64846-8|AAG24109.1|  331|Caenorhabditis elegans Serpentine
           receptor, class t protein19 protein.
          Length = 331

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 302 CFSGTKLYFFLVS 340
           CF+G K+YFFL S
Sbjct: 156 CFAGNKIYFFLFS 168


>U64846-6|AAG24115.3|  336|Caenorhabditis elegans Serpentine
           receptor, class t protein20 protein.
          Length = 336

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 302 CFSGTKLYFFLVS 340
           CF+G K+YFFL S
Sbjct: 156 CFAGNKIYFFLFS 168


>AL023837-3|CAB63348.2|  283|Caenorhabditis elegans Hypothetical
           protein Y37H2C.4 protein.
          Length = 283

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 83  YHSLNGSSMSISYCSYVYR 139
           Y S  GSSMS+  C ++YR
Sbjct: 52  YSSCYGSSMSVFACHFIYR 70


>AF106579-8|AAC78201.1|  710|Caenorhabditis elegans Hypothetical
           protein F54E2.5 protein.
          Length = 710

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +2

Query: 152 ILVT*LASVVSPCKSIRVFCNQEMFVSYSSKIYLRL 259
           IL + L   + PC+   VF    +F+++SS IY+ L
Sbjct: 494 ILFSNLVIAIHPCQFPAVFLVLNIFLNFSSIIYIWL 529


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,729,654
Number of Sequences: 27780
Number of extensions: 113572
Number of successful extensions: 189
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 189
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 472561672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)