Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22i04
         (703 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024809-7|AAF59540.1|  315|Caenorhabditis elegans Hypothetical ...    37   0.016
Z98866-11|CAB11564.2|  335|Caenorhabditis elegans Hypothetical p...    33   0.15 
U62896-1|AAB17868.1|  335|Caenorhabditis elegans PIE-1 protein.        33   0.15 
Z74476-2|CAA98962.1|  200|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPas...    29   3.2  
AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane cal...    29   3.2  
AC025724-12|AAK68550.1| 1160|Caenorhabditis elegans Membrane cal...    29   3.2  
AC025724-11|AAM97979.1| 1137|Caenorhabditis elegans Membrane cal...    29   3.2  
U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin st...    29   4.3  
AL117204-23|CAB55137.1|  285|Caenorhabditis elegans Hypothetical...    29   4.3  
AC024826-3|AAP13746.1|  343|Caenorhabditis elegans Hypothetical ...    28   5.6  
AC024826-2|AAF60798.1|  413|Caenorhabditis elegans Hypothetical ...    28   5.6  
Z70205-4|CAA94115.2|  528|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z68297-6|CAE45045.1|  302|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>AC024809-7|AAF59540.1|  315|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.9 protein.
          Length = 315

 Score = 36.7 bits (81), Expect = 0.016
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = +2

Query: 593 ENDGKPNDVEETMCRNFVRNTCNRGASCRYLH 688
           E++ +     + +CR+F++N CNRG+ C++ H
Sbjct: 46  EHNKQQQQQRDDVCRDFLKNICNRGSRCKFYH 77


>Z98866-11|CAB11564.2|  335|Caenorhabditis elegans Hypothetical
           protein Y49E10.14 protein.
          Length = 335

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +2

Query: 587 PTENDGKPNDVEETMCRNFVRNTCNRGASCRYLH 688
           P+ N G  N     +C NF R  C  G  CR++H
Sbjct: 177 PSNNHGSSN--RRQICHNFERGNCRYGPRCRFIH 208


>U62896-1|AAB17868.1|  335|Caenorhabditis elegans PIE-1 protein.
          Length = 335

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +2

Query: 587 PTENDGKPNDVEETMCRNFVRNTCNRGASCRYLH 688
           P+ N G  N     +C NF R  C  G  CR++H
Sbjct: 177 PSNNHGSSN--RRQICHNFERGNCRYGPRCRFIH 208


>Z74476-2|CAA98962.1|  200|Caenorhabditis elegans Hypothetical
           protein W05B10.2 protein.
          Length = 200

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 10/42 (23%), Positives = 23/42 (54%)
 Frame = +2

Query: 569 INIKTDPTENDGKPNDVEETMCRNFVRNTCNRGASCRYLHKI 694
           +++   P+E + K +   +  C+N+++  C  G  CR+ H +
Sbjct: 121 VDLSDKPSEKERKKS---KFTCKNYLKGKCRFGDKCRFSHPV 159


>AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPase
           protein.
          Length = 1237

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +2

Query: 524 KEIVNEEYIDTSSITINIKTDPTENDGKPNDVEE 625
           KE +  +Y  T+ +   +KTDP  N+G PN+ EE
Sbjct: 23  KEKIETDYGGTTGLCERLKTDP--NNGLPNNEEE 54


>AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane
           calcium atpase protein3, isoform b protein.
          Length = 1234

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +2

Query: 524 KEIVNEEYIDTSSITINIKTDPTENDGKPNDVEE 625
           KE +  +Y  T+ +   +KTDP  N+G PN+ EE
Sbjct: 23  KEKIETDYGGTTGLCERLKTDP--NNGLPNNEEE 54


>AC025724-12|AAK68550.1| 1160|Caenorhabditis elegans Membrane
           calcium atpase protein3, isoform a protein.
          Length = 1160

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +2

Query: 524 KEIVNEEYIDTSSITINIKTDPTENDGKPNDVEE 625
           KE +  +Y  T+ +   +KTDP  N+G PN+ EE
Sbjct: 23  KEKIETDYGGTTGLCERLKTDP--NNGLPNNEEE 54


>AC025724-11|AAM97979.1| 1137|Caenorhabditis elegans Membrane
           calcium atpase protein3, isoform c protein.
          Length = 1137

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +2

Query: 524 KEIVNEEYIDTSSITINIKTDPTENDGKPNDVEE 625
           KE +  +Y  T+ +   +KTDP  N+G PN+ EE
Sbjct: 23  KEKIETDYGGTTGLCERLKTDP--NNGLPNNEEE 54


>U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin
            structural genes (yolk protein genes) protein 1 protein.
          Length = 1616

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 13/57 (22%), Positives = 31/57 (54%)
 Frame = +2

Query: 287  KRNKCEAQTQPSPNFKHMKKYLKCKFGEESHSPQYHAVTEFPEAEAMEKKGNEQTEK 457
            K  +CEA+ +     K+ +KY + K+  E +S  +    ++ +    +K+ N++++K
Sbjct: 1474 KNEECEAEEERLSEKKNYRKYDERKYESEEYS--FEETYDYEQENTNKKQKNQRSQK 1528


>AL117204-23|CAB55137.1|  285|Caenorhabditis elegans Hypothetical
           protein Y116A8C.35 protein.
          Length = 285

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 614 DVEETMCRNFVRNTCNRGASCRYLH 688
           D  E+ CR     TC++G  C ++H
Sbjct: 158 DFRESRCRQHEVTTCSKGGFCNFMH 182


>AC024826-3|AAP13746.1|  343|Caenorhabditis elegans Hypothetical
           protein Y55F3AM.6b protein.
          Length = 343

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 623 ETMCRNFVRNTCNRGASCRYLHKI 694
           ET CR F    C++G +C + H +
Sbjct: 5   ETDCRYFANGYCSKGNTCTFTHDV 28


>AC024826-2|AAF60798.1|  413|Caenorhabditis elegans Hypothetical
           protein Y55F3AM.6a protein.
          Length = 413

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 623 ETMCRNFVRNTCNRGASCRYLHKI 694
           ET CR F    C++G +C + H +
Sbjct: 5   ETDCRYFANGYCSKGNTCTFTHDV 28


>Z70205-4|CAA94115.2|  528|Caenorhabditis elegans Hypothetical
           protein C11H1.5 protein.
          Length = 528

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 13/55 (23%), Positives = 26/55 (47%)
 Frame = +2

Query: 527 EIVNEEYIDTSSITINIKTDPTENDGKPNDVEETMCRNFVRNTCNRGASCRYLHK 691
           EI  + Y+ T+ I   +  DP   +  P   +   C   ++NTC+ G   +++ +
Sbjct: 417 EITAQLYM-TNEIVQTLADDPLPVETNPECEQNKRCCKIIKNTCSDGIDPKFVKR 470


>Z68297-6|CAE45045.1|  302|Caenorhabditis elegans Hypothetical
           protein F11A10.8 protein.
          Length = 302

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +2

Query: 629 MCRNFVRNTCNRGASCRYLHK 691
           +C++++R  C +G  C +LH+
Sbjct: 81  VCKHWLRGLCKKGDQCEFLHE 101


>Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical protein
            W07E11.1 protein.
          Length = 2207

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +2

Query: 569  INIKTDPTENDGKPND-VEETMCRNFVRNTCNRGAS 673
            +N+KTDP  N   P D  +  + + F    C RG S
Sbjct: 2129 LNLKTDPRSNILTPKDKYDSDVAKVFAAGDCRRGQS 2164


>Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical protein
            W07E11.1 protein.
          Length = 2207

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +2

Query: 569  INIKTDPTENDGKPND-VEETMCRNFVRNTCNRGAS 673
            +N+KTDP  N   P D  +  + + F    C RG S
Sbjct: 2129 LNLKTDPRSNILTPKDKYDSDVAKVFAAGDCRRGQS 2164


>Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical
           protein ZC84.6 protein.
          Length = 1474

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +2

Query: 632 CRNFVRNTCNRGASCRYLHK 691
           C +F R+TC+RGA   Y+H+
Sbjct: 265 CESFCRDTCSRGAP-EYIHR 283


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,352,045
Number of Sequences: 27780
Number of extensions: 272759
Number of successful extensions: 712
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)