Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22i01
         (630 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...   126   1e-31
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...   109   3e-26
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                42   5e-06
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    38   6e-05
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    38   6e-05
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    36   4e-04
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    34   0.001
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   4.3  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   4.3  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   5.7  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   9.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   9.9  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score =  126 bits (305), Expect = 1e-31
 Identities = 59/149 (39%), Positives = 94/149 (63%), Gaps = 1/149 (0%)
 Frame = +2

Query: 185 IEFSELERIKTLGTGAFGRVFLLKHT-KNNRLYAMKVLEKENIVKMKQVEHTLYEKRVLE 361
           +   +L  + TLG G FGRV L++    ++R +A+K ++K  IV+ +Q +H + EKR++ 
Sbjct: 362 LRLQDLRPLATLGVGGFGRVELVQIAGDSSRSFALKQMKKAQIVETRQQQHIMSEKRIMG 421

Query: 362 AIRFPFTVSMEFSFKDNSYIYFIMPFVPGGEMFTHLRRMKKFEETLAKFYASQVILALEY 541
                F V +  +FKD  Y+Y +M    GGE++T LR    F++   +FY + V+ A +Y
Sbjct: 422 EADCDFVVKLFKTFKDRKYLYMLMEACLGGELWTVLRDKGHFDDGTTRFYTACVVEAFDY 481

Query: 542 LHFCNLVYRDLKPENILIDRNGYLKITDF 628
           LH  N++YRDLKPEN+L+D  GY+K+ DF
Sbjct: 482 LHSRNIIYRDLKPENLLLDSQGYVKLVDF 510


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score =  109 bits (261), Expect = 3e-26
 Identities = 51/128 (39%), Positives = 86/128 (67%), Gaps = 1/128 (0%)
 Frame = +2

Query: 248 LLKHTKNNRLYAMKVLEKENIVKMKQVEHTLYEKRVLE-AIRFPFTVSMEFSFKDNSYIY 424
           L +    + LYA+K+L+K+ I++   VE T+ EKRVL  + + PF V +   F+    +Y
Sbjct: 2   LAERKGTDELYAIKILKKDIIIQDDDVECTMVEKRVLALSTKPPFLVQLHSCFQTMDRLY 61

Query: 425 FIMPFVPGGEMFTHLRRMKKFEETLAKFYASQVILALEYLHFCNLVYRDLKPENILIDRN 604
           F+M +V GG++   +++  KF+E +A FYAS++ + L +LH   +VYRDLK +N+L+D++
Sbjct: 62  FVMEYVNGGDLMYQIQQCGKFKEPVAVFYASEIAIGLFFLHGRGIVYRDLKLDNVLLDQD 121

Query: 605 GYLKITDF 628
           G++KI DF
Sbjct: 122 GHIKIADF 129


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 41.9 bits (94), Expect = 5e-06
 Identities = 16/36 (44%), Positives = 26/36 (72%)
 Frame = +2

Query: 521 VILALEYLHFCNLVYRDLKPENILIDRNGYLKITDF 628
           +  AL++ H   +V+ D+KP+NIL+ +NG  K+TDF
Sbjct: 164 ITCALQFCHNAGIVHADVKPKNILMSKNGQPKLTDF 199


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 38.3 bits (85), Expect = 6e-05
 Identities = 17/39 (43%), Positives = 25/39 (64%)
 Frame = +2

Query: 512 ASQVILALEYLHFCNLVYRDLKPENILIDRNGYLKITDF 628
           A  V+  + YLH   LV+RD+K +N+L+D     K+TDF
Sbjct: 703 ALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDF 741


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 38.3 bits (85), Expect = 6e-05
 Identities = 17/39 (43%), Positives = 25/39 (64%)
 Frame = +2

Query: 512 ASQVILALEYLHFCNLVYRDLKPENILIDRNGYLKITDF 628
           A  V+  + YLH   LV+RD+K +N+L+D     K+TDF
Sbjct: 741 ALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDF 779


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 35.5 bits (78), Expect = 4e-04
 Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
 Frame = +2

Query: 338 LYEKRVLEAIRFPFTVSMEFSFKDNSYIYFIMPFVPGGEMFTHLRRMK-KFEETLAKFYA 514
           L E  ++     P  + ++     ++ +  I  F+  G + T LR    KF+        
Sbjct: 682 LTEASIMGQFEHPNVIFLQGVVTKSNPVMIITEFMENGSLDTFLRANDGKFQVLQLVGML 741

Query: 515 SQVILALEYLHFCNLVYRDLKPENILIDRNGYLKITDF 628
             +   ++YL   N V+RDL   N+L++     KI DF
Sbjct: 742 RGIASGMQYLAEMNYVHRDLAARNVLVNAALVCKIADF 779


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 33.9 bits (74), Expect = 0.001
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = +2

Query: 485 FEETLAKFYASQVILALEYLHFCNLVYRDLKPENILI---DRNGYLKITDF 628
           + E  A     Q++ ++ + H   +V+RDLKPEN+L+    +   +K+ DF
Sbjct: 6   YSEADASHCIQQILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADF 56


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -2

Query: 281 RIIYYSSCASTKTPYRMHP 225
           R +   SC +   PYR HP
Sbjct: 95  RALVVVSCVTKDQPYRPHP 113


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -2

Query: 281 RIIYYSSCASTKTPYRMHP 225
           R +   SC +   PYR HP
Sbjct: 95  RALVVVSCVTKDQPYRPHP 113


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +1

Query: 469 ASNEKI*RNTCEILR*PGHFGFRIS-SFL*SCL 564
           ASN KI  N CE+ R   H G  ++ S L  CL
Sbjct: 119 ASNGKIYANHCELHRAACHSGSSLTKSRLMRCL 151


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 602 SCRLIYFQASNLYRQ 558
           S RL Y+Q ++LY++
Sbjct: 279 STRLFYYQLTDLYKK 293


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/28 (25%), Positives = 13/28 (46%)
 Frame = -1

Query: 240  LPNAPVPRVLMRSNSENSIEYFGFWHQR 157
            +P+ P   +++         + GFWH R
Sbjct: 960  MPSEPKAPMILVGPGTGIAPFRGFWHHR 987


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,844
Number of Sequences: 438
Number of extensions: 3386
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)