Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22h23
         (722 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0230 + 27718840-27720188,27720983-27721174,27721488-277215...    29   4.9  
10_08_0065 + 14596257-14597417                                         28   8.6  

>01_06_0230 +
           27718840-27720188,27720983-27721174,27721488-27721569,
           27721651-27721839,27721964-27722077,27722470-27722560,
           27722632-27722789,27723401-27723826,27724355-27724727,
           27725075-27725238
          Length = 1045

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -2

Query: 256 MCKYCSENISTINMCTKTY 200
           MCKYCS N  T N+  K+Y
Sbjct: 764 MCKYCSPNNITCNIMLKSY 782


>10_08_0065 + 14596257-14597417
          Length = 386

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +2

Query: 443 SEIVTNKGSLPGWRLDVALPIPLKQLLRKVFK 538
           S+++ N G    WR D AL IP+ +L+ + ++
Sbjct: 353 SKLIVNLGQSNEWRRDGALVIPIAKLILRYYQ 384


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,442,633
Number of Sequences: 37544
Number of extensions: 310592
Number of successful extensions: 620
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)