Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22h22
(715 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0864 - 32546696-32546803,32546881-32546961,32547134-325472... 113 1e-25
07_01_0454 + 3443871-3444024,3444268-3444356,3445482-3445557,344... 107 1e-23
03_01_0658 + 4818401-4818540,4818605-4819201,4819694-4819949,482... 53 2e-07
02_04_0319 - 22006550-22006952,22007260-22007441,22007522-220077... 53 2e-07
03_01_0641 - 4697273-4697672,4697921-4698102,4698218-4698403,469... 50 2e-06
11_06_0151 - 20643032-20643085,20643202-20643307,20643415-206434... 49 4e-06
06_01_0588 - 4224348-4224516,4224674-4224767,4224872-4225490,422... 48 1e-05
02_05_1059 + 33815979-33816235,33816467-33816732,33817149-338171... 48 1e-05
12_02_0381 + 18376045-18376114,18376270-18376420,18376524-183766... 45 7e-05
12_02_1151 + 26488686-26488792,26488897-26489142,26490246-264903... 44 9e-05
01_05_0297 - 20578031-20578080,20578162-20578236,20578317-205784... 44 1e-04
11_04_0281 + 15733505-15733647,15734366-15734443,15734835-157350... 44 2e-04
04_04_0075 - 22542486-22542882,22543181-22543362,22543452-225436... 43 3e-04
09_04_0435 - 17545879-17546605,17546721-17546782,17547123-175473... 42 5e-04
07_01_0426 + 3239274-3239386,3239472-3239702,3242516-3242642,324... 42 6e-04
10_01_0345 - 3811057-3811236,3811342-3811615,3811732-3812289,381... 39 0.005
11_06_0027 + 19363678-19363698,19364442-19364484,19366240-193662... 37 0.018
07_03_1573 + 27829967-27830338,27830821-27831510,27831594-278317... 36 0.042
04_04_1365 - 32967604-32968367,32969097-32969221,32969583-32969632 35 0.056
02_05_0382 + 28491318-28491374,28492031-28492114,28492249-284922... 31 0.69
07_01_0020 - 127855-129156,129240-129365,129811-129865,130047-13... 29 2.8
09_05_0019 - 20103044-20103760 29 3.7
08_02_1464 - 27317282-27318037 29 3.7
09_04_0075 - 14340458-14340551,14340643-14340814,14340895-143410... 29 4.8
>01_06_0864 -
32546696-32546803,32546881-32546961,32547134-32547250,
32548264-32548338,32548618-32548680,32549122-32549187,
32549254-32549325,32549403-32549504,32549588-32549765,
32549871-32549926,32551578-32551688,32551797-32551865,
32551960-32552068,32552176-32552327,32552398-32552475,
32554257-32554379,32555527-32555646,32555729-32555809,
32555881-32556027,32556112-32556190,32557223-32557297,
32558004-32558113,32558984-32559082,32559700-32559815,
32559914-32560022,32560098-32560229,32560389-32560591,
32561428-32561585,32561668-32561797,32562529-32562607,
32562806-32562829
Length = 1073
Score = 113 bits (273), Expect = 1e-25
Identities = 67/167 (40%), Positives = 94/167 (56%), Gaps = 19/167 (11%)
Frame = +3
Query: 3 LHLLRFQYDPQRDASVKFNDRFEFYEEINLDP----YLQEVPS--TPSHYTLHAVLVHSG 164
+ L RF+YD RD VK NDR+EF +++LD YL + YTLH+VLVHSG
Sbjct: 334 VQLKRFEYDFVRDTMVKINDRYEFPLQLDLDKDDGKYLSPEADRRVRNLYTLHSVLVHSG 393
Query: 165 DNHGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKEDAPH----------MA 314
HGGHY FI P W KFDD+ V++ + A+E YGG+E+ PH
Sbjct: 394 GGHGGHYYAFIRPALSDIWYKFDDERVTKEDMKRALEEQYGGEEELPHTNPGLNTTPLRF 453
Query: 315 RKATSAYMLIYIQTTQLKYVLQDASESDIPPDLCDRI---NEEMRYE 446
K ++AYML+YI+ + + ++ + E+DIP L R+ NEE Y+
Sbjct: 454 TKHSNAYMLVYIRESDREKIICNLDENDIPEHLKIRLRKENEEREYK 500
>07_01_0454 +
3443871-3444024,3444268-3444356,3445482-3445557,
3445875-3445880,3445984-3446131,3446237-3446394,
3446473-3446676,3446803-3447038,3447227-3447439,
3447984-3448082,3448262-3448371,3448581-3448655,
3449407-3449485,3449563-3449709,3449785-3449865,
3449975-3450094,3450580-3450702,3451382-3451459,
3451586-3451674,3451760-3451868,3452117-3452227,
3452557-3452612,3452697-3452874,3452971-3453072,
3453160-3453231,3453350-3453415,3453502-3453567,
3453676-3453759,3454638-3454754,3455753-3455827,
3455912-3455995,3456138-3456179
Length = 1148
Score = 107 bits (256), Expect = 1e-23
Identities = 62/160 (38%), Positives = 89/160 (55%), Gaps = 16/160 (10%)
Frame = +3
Query: 3 LHLLRFQYDPQRDASVKFNDRFEFYEEINLD----PYLQEVP--STPSHYTLHAVLVHSG 164
L L RF+YD RD VK NDR+EF +++LD YL + + YTLH+VLVHSG
Sbjct: 445 LQLKRFEYDFMRDTMVKINDRYEFPIQLDLDRDDGKYLSPDADRNVRNLYTLHSVLVHSG 504
Query: 165 DNHGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKED----------APHMA 314
HGGHY FI P +W KFDD+ V++ + A+E YGG+E+ P
Sbjct: 505 GVHGGHYYAFIRPTLSDQWFKFDDERVTKEDAKRALEEQYGGEEELPQTNPGLNNTPFKF 564
Query: 315 RKATSAYMLIYIQTTQLKYVLQDASESDIPPDLCDRINEE 434
K ++AYML+YI+ + ++ + E DI L R+ ++
Sbjct: 565 TKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRIRLEKD 604
>03_01_0658 +
4818401-4818540,4818605-4819201,4819694-4819949,
4820038-4820723,4821009-4821147,4821378-4821514,
4821805-4822077,4822175-4822382,4822660-4822731,
4823230-4823460,4824269-4824532,4825127-4825268,
4825355-4825467
Length = 1085
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +3
Query: 9 LLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSHYTLHAVLVHSGDN-HGGHY 185
L R+ + P+ K + F F ++++ L PS+ Y L A+L+H G + GHY
Sbjct: 323 LKRYVFLPKTTTKKKISSAFSFPGQLDMGKRLSN-PSSSYTYGLSAILIHKGSAANSGHY 381
Query: 186 VVFINPKGDGKWCKFDDDVVSR 251
V + + +G+W +FDD+ VS+
Sbjct: 382 VAHVKDESNGQWWEFDDEHVSK 403
>02_04_0319 -
22006550-22006952,22007260-22007441,22007522-22007704,
22008144-22008242,22008999-22009115,22010476-22010739
Length = 415
Score = 53.2 bits (122), Expect = 2e-07
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 2/117 (1%)
Frame = +3
Query: 3 LHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSHYTLHAVLVHSGD--NHG 176
+HL RF+Y Q K + R + E+ L ++ Y+L AV+VH G NHG
Sbjct: 301 IHLKRFKYVEQLSRHKKLSYRVVYPLELKLGSMSEDADC---EYSLFAVVVHVGSSPNHG 357
Query: 177 GHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKEDAPHMARKATSAYMLIY 347
HYV I K G W FDDD V + +++ ++ YG + H Y+L Y
Sbjct: 358 -HYVSQI--KSHGNWLSFDDDTV-QISEESTLQTFYGSSRE--HCGGNTDHGYILFY 408
>03_01_0641 -
4697273-4697672,4697921-4698102,4698218-4698403,
4699287-4699385,4700028-4700144,4700698-4700814
Length = 366
Score = 49.6 bits (113), Expect = 2e-06
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Frame = +3
Query: 3 LHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSHYTLHAVLVH--SGDNHG 176
+HL RF+Y Q K + R F E+ L + V ++ Y+L AVLVH SG NH
Sbjct: 253 IHLKRFKYIEQLGRYKKLSYRVVFPLELKL---INTVDNSDLEYSLFAVLVHVGSGPNH- 308
Query: 177 GHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKEDAPHMARKATSAYMLIY 347
GHY+ + K W FDD+ V T + ++ +G A + + Y+L Y
Sbjct: 309 GHYISLV--KSHNHWLFFDDENV-EMTDESMVQTFFG---SAQEFSGNTDNGYILFY 359
>11_06_0151 -
20643032-20643085,20643202-20643307,20643415-20643495,
20643588-20643715,20643829-20643903,20644853-20645374,
20646622-20646687,20647990-20648076,20648173-20648247,
20648705-20648821,20648932-20649015,20649152-20649217,
20649352-20649417,20650079-20650150,20650231-20650332,
20650428-20650605,20650700-20650755,20653159-20653269,
20653354-20653422,20653558-20653741,20653826-20653914,
20654070-20654147,20654509-20654631,20654755-20654874,
20654975-20655055,20655285-20655431,20655533-20655611,
20657114-20657223,20659138-20659236,20659467-20659582,
20659673-20659781,20659839-20660069,20660152-20660417,
20661349-20661506,20661601-20661751,20661897-20661966,
20662203-20662232
Length = 1451
Score = 48.8 bits (111), Expect = 4e-06
Identities = 47/154 (30%), Positives = 68/154 (44%), Gaps = 10/154 (6%)
Frame = +3
Query: 3 LHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSHYTLHAVLVHSGDNHGGH 182
L L RF+YD RD VK NDR+EF +++LD Y L D +
Sbjct: 394 LQLKRFEYDYMRDTMVKINDRYEFPLQLDLD-------RDDGKY-----LAPDADRSIRN 441
Query: 183 YVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKED----------APHMARKATSA 332
K D D+ V TK +A+E YGG+E+ AP K ++A
Sbjct: 442 LYALHRYKFD------DERVTKEDTK-KALEEQYGGEEELPQINPGFNNAPFKFTKYSNA 494
Query: 333 YMLIYIQTTQLKYVLQDASESDIPPDLCDRINEE 434
YML+YI+ + ++ + E DI L R+ +E
Sbjct: 495 YMLVYIRESDKDKIMCNVDEKDIAEHLRVRLKKE 528
>06_01_0588 -
4224348-4224516,4224674-4224767,4224872-4225490,
4225609-4225734,4225819-4226487,4226728-4226853,
4226940-4227266,4227366-4227439,4228469-4228583,
4228871-4229164
Length = 870
Score = 47.6 bits (108), Expect = 1e-05
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Frame = +3
Query: 3 LHLLRFQ-YDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSHYTLHAVLVHSGDN-HG 176
+HL RF ++P+ K + + +F ++L P++ + Y+L+ VLVH+G N
Sbjct: 236 IHLKRFSPFNPRE----KIDKKVDFQPMLDLKPFISDSKGADFKYSLYGVLVHAGWNTQS 291
Query: 177 GHYVVFINPKGDGKWCKFDDDVVSRCTKQEAI 272
GHY F+ G W DD+ V + + + +
Sbjct: 292 GHYYCFVR-TSSGMWHNLDDNQVRQVREADVL 322
>02_05_1059 +
33815979-33816235,33816467-33816732,33817149-33817192,
33817363-33817539,33817638-33817964,33818067-33818192,
33818518-33818622,33818815-33820125,33820221-33820382,
33820416-33820517,33820549-33821272,33821358-33821451,
33821824-33821986
Length = 1285
Score = 47.6 bits (108), Expect = 1e-05
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +3
Query: 3 LHLLRFQ-YDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSHYTLHAVLVHSGDN-HG 176
+HL RF ++P+ K + + +F +NL PY+ Y+L+ VLVH+G N
Sbjct: 323 IHLKRFSPFNPRH----KIDKKVQFQPTLNLKPYVSNPEGMEFKYSLYGVLVHAGWNTQS 378
Query: 177 GHYVVFINPKGDGKWCKFDDD 239
GHY F+ G W DD+
Sbjct: 379 GHYYCFVR-TSSGIWHNLDDN 398
>12_02_0381 +
18376045-18376114,18376270-18376420,18376524-18376681,
18378680-18378945,18379025-18379243,18379309-18379417,
18379488-18379603,18379935-18380033,18381447-18381556,
18382928-18383006,18383127-18383273,18383363-18383443,
18383529-18383648,18383902-18384024,18384276-18384353,
18384459-18384547,18384653-18384761,18385018-18385086,
18385200-18385310,18385657-18385712,18385808-18385985,
18386065-18386166,18386243-18386314,18386489-18386554,
18386674-18386739,18386853-18386936,18387080-18387196,
18388077-18388163,18389321-18389341
Length = 1050
Score = 44.8 bits (101), Expect = 7e-05
Identities = 46/160 (28%), Positives = 70/160 (43%), Gaps = 16/160 (10%)
Frame = +3
Query: 3 LHLLRFQYDPQRDASVKFNDR--FEFYEEINLDPYLQEVP----STPSHYTLHAVLVHSG 164
L L RF+YD RD VK NDR F +++ D P S + YTLH
Sbjct: 380 LQLKRFEYDYMRDTMVKINDRYEFPLQLDLDRDDGKYLAPDADRSIRNLYTLHRY----- 434
Query: 165 DNHGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKEDAPHM----------A 314
KFDD+ V++ ++A+E YGG+E+ P +
Sbjct: 435 --------------------KFDDERVTKEDTKKALEEQYGGEEELPQINPGFNNTPFKF 474
Query: 315 RKATSAYMLIYIQTTQLKYVLQDASESDIPPDLCDRINEE 434
K ++AYML+YI+ + ++ + E DI L R+ +E
Sbjct: 475 TKYSNAYMLVYIRESDKDKIMCNVDEKDIAEHLRIRLKKE 514
>12_02_1151 + 26488686-26488792,26488897-26489142,26490246-26490381,
26490502-26490561,26490648-26490740,26491421-26491663,
26491828-26491968,26492312-26492482,26492813-26492899,
26492954-26493211,26493300-26493445,26493535-26493922,
26493935-26494092,26494267-26494540,26494721-26494894
Length = 893
Score = 44.4 bits (100), Expect = 9e-05
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +3
Query: 3 LHLLRFQYDPQRDASVKFNDRFEF-YEEINLDPYL-QEVPSTPSHYTLHAVLVHSGDNHG 176
+HL RF Y R K +F +++L Y+ +HY L+A+ H G G
Sbjct: 771 IHLKRFSYS--RYTKNKLETCVDFPVHDLDLSKYIGSRGQQISNHYRLYAISNHYGSMGG 828
Query: 177 GHYVVFINPKGDGKWCKFDD 236
GHY ++ +G W FDD
Sbjct: 829 GHYTAYVYHEGKKGWYDFDD 848
>01_05_0297 -
20578031-20578080,20578162-20578236,20578317-20578416,
20578476-20578535,20578833-20578907,20578989-20579069,
20579596-20579665,20579769-20579833,20580008-20580116,
20580812-20580876,20580964-20581023,20582008-20582134,
20582215-20582315,20583209-20583316,20583429-20583464,
20583569-20583714,20585555-20585564
Length = 445
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +3
Query: 93 DPYLQ--EVPSTPSHYTLHAVLVHSGDN-HGGHYVVFINPKGDGKWCKFDDDVVSRCTKQ 263
DPY + Y L AVL H G + GHYV ++ + DGKW +FDDD S ++
Sbjct: 363 DPYFNTFNLKHLTGIYDLIAVLTHKGRSADSGHYVGWVK-QDDGKWIEFDDDNPSIRKEE 421
Query: 264 EAIEYNYGG 290
E ++ + GG
Sbjct: 422 EILKLSGGG 430
>11_04_0281 + 15733505-15733647,15734366-15734443,15734835-15735077,
15735868-15736012,15736234-15736293,15736376-15736471,
15736651-15737067,15737824-15737964,15738043-15738213,
15738394-15738651,15738741-15738889,15739060-15739557,
15740147-15740420,15740631-15740696,15740891-15741057,
15741413-15741497,15741673-15741732
Length = 1016
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +3
Query: 3 LHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSH-YTLHAVLVHSGDNHGG 179
+HL RF + ++ F ++ +L Y+ S+ Y L+AV H G G
Sbjct: 826 IHLKRFSFSRSTKQKLETFVNFPIHD-FDLTNYIANKKSSERQIYELYAVSNHYGSMASG 884
Query: 180 HYVVFINPKGDGKWCKFDDDVVSRCTKQEAI 272
HY +I + +W FDD VS +++ I
Sbjct: 885 HYTAYIKLLDEERWYNFDDSHVSAINEEDGI 915
>04_04_0075 -
22542486-22542882,22543181-22543362,22543452-22543637,
22543959-22544057,22546198-22546314,22547739-22547855
Length = 365
Score = 42.7 bits (96), Expect = 3e-04
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Frame = +3
Query: 3 LHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSHYTLHAVLVH--SGDNHG 176
+HL RF+Y Q K + R F E+ L + Y+L AV+VH SG NH
Sbjct: 253 IHLKRFKYIEQLGRYKKLSYRVVFPMELK----LSTSDDVDTEYSLFAVVVHVGSGPNH- 307
Query: 177 GHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKED 299
GHYV + K W FDD+ V ++ ++ +G +
Sbjct: 308 GHYVSLV--KSHNHWLFFDDENV-EMVEESTLQTFFGSSHE 345
>09_04_0435 -
17545879-17546605,17546721-17546782,17547123-17547335,
17547506-17547590,17547904-17548061,17548174-17548294,
17548765-17548927,17548973-17549097,17550800-17550888,
17550970-17551636,17552671-17552717,17553506-17553862
Length = 937
Score = 41.9 bits (94), Expect = 5e-04
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +3
Query: 51 KFNDRFEFYEEINLDPYLQEVPSTPSHYTLHAVLVH---SGDNHGGHYVVFINPKGDGKW 221
K N F E +NL Y+ Y L+AV+VH GHYV ++ GKW
Sbjct: 610 KINKAVRFTEYLNLSNYMSTADDISPVYQLYAVVVHHDVMNAAFSGHYVCYVKDT-QGKW 668
Query: 222 CKFDDDVVSRCTKQEAI 272
K DD V + ++ +
Sbjct: 669 HKMDDSQVKPVSLEKVL 685
>07_01_0426 + 3239274-3239386,3239472-3239702,3242516-3242642,
3242729-3242788,3242868-3242960,3243073-3243369,
3243450-3243761,3243857-3244114,3244227-3244375,
3244470-3245102,3245367-3245640,3245736-3245777,
3246332-3246586,3246700-3246711
Length = 951
Score = 41.5 bits (93), Expect = 6e-04
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +3
Query: 3 LHLLRFQYDP-QRDASVKFNDRFEFYEEINLDPYLQEVPS-TPSHYTLHAVLVHSGDNHG 176
+HL RF Y R+ F D F +++L Y+ + + HY L+A+ H G+ G
Sbjct: 784 IHLKRFSYTQFTRNKLETFVD-FPI-SDLDLSSYIIDKSELSDCHYRLYAISNHYGNMGG 841
Query: 177 GHYVVFINPKGDGKWCKFDDD 239
GHY I + W KFDD+
Sbjct: 842 GHYTASIYHEEGKGWYKFDDE 862
>10_01_0345 - 3811057-3811236,3811342-3811615,3811732-3812289,
3812602-3812747,3812930-3813097,3813896-3814003,
3814859-3815029,3816557-3816949,3817522-3817617,
3817715-3817774,3818600-3818744,3819296-3819520,
3820106-3820254
Length = 890
Score = 38.7 bits (86), Expect = 0.005
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Frame = +3
Query: 3 LHLLRFQYDPQRDASVKFNDRFEF-YEEINLDPYLQEVPST-PSHYTLHAVLVHSGDNHG 176
+HL RF Y R K + F ++++ Y P Y L+AV+ H G G
Sbjct: 766 VHLKRFSYS--RFMKNKLDTFVNFPIHDLDMSRYANHSRGDQPPIYELYAVINHYGGMGG 823
Query: 177 GHYVVFINPKGDGKWCKFDDDVVSRCTKQE 266
GHY + + W FDD VS +++
Sbjct: 824 GHYSAYAKLVEEDSWYHFDDSHVSSVGEED 853
>11_06_0027 +
19363678-19363698,19364442-19364484,19366240-19366276,
19366359-19366602,19366749-19366765,19366901-19366986,
19367347-19367378,19367455-19367615,19367722-19367818,
19367894-19368085,19368172-19368233,19368302-19368448,
19368776-19369589
Length = 650
Score = 36.7 bits (81), Expect = 0.018
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 51 KFNDRFEFYEEINLDPYLQEVPSTPSHYTLHAVLVHSGDNHGGHYVVFI 197
K + F E+++ PY+ V + Y L ++VH G GGHY ++
Sbjct: 250 KIGELINFPTELDISPYMSGVVTDKHIYELFGIIVHEGGVIGGHYRSYV 298
>07_03_1573 +
27829967-27830338,27830821-27831510,27831594-27831781,
27832286-27832318,27832364-27832605,27833178-27833320,
27833649-27833825,27834104-27834256,27834639-27834694,
27834998-27835157,27835301-27835348
Length = 753
Score = 35.5 bits (78), Expect = 0.042
Identities = 29/87 (33%), Positives = 35/87 (40%), Gaps = 5/87 (5%)
Frame = +3
Query: 3 LHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPS----HYTLHAVLVHSGDN 170
LHL RF Y K F E+ L L PS+ Y L A + H G N
Sbjct: 577 LHLKRFSYGSH--GCTKLFKPIHFPLELVLSRDLLSSPSSEHMQSRRYELVATITHLGAN 634
Query: 171 HG-GHYVVFINPKGDGKWCKFDDDVVS 248
GHY G+W +FDDD V+
Sbjct: 635 PSRGHYTADAK-SASGQWLRFDDDNVT 660
>04_04_1365 - 32967604-32968367,32969097-32969221,32969583-32969632
Length = 312
Score = 35.1 bits (77), Expect = 0.056
Identities = 25/78 (32%), Positives = 37/78 (47%)
Frame = +3
Query: 126 SHYTLHAVLVHSGDNHGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKEDAP 305
S + + AV++HSG GHYV ++ + + W K DD V+R +
Sbjct: 241 SEFEIFAVIMHSGKLEAGHYVTYL--RLNNHWYKCDDAWVTRVEE--------------- 283
Query: 306 HMARKATSAYMLIYIQTT 359
H R + AYML Y+Q T
Sbjct: 284 HTVR-TSQAYMLFYVQKT 300
>02_05_0382 +
28491318-28491374,28492031-28492114,28492249-28492272,
28492398-28492472,28493083-28493157,28493198-28493290,
28493332-28493409,28493690-28493767,28494084-28494147,
28494474-28494655,28494729-28495064,28495148-28495267,
28495434-28495923,28496240-28496502
Length = 672
Score = 31.5 bits (68), Expect = 0.69
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Frame = +3
Query: 3 LHLLRFQYDPQRDASVKFNDRFEFYE-EINLDPYLQEVPSTPS-HYTLHAVLVHSGDNHG 176
+HL RF D SV+ D+ Y E++L P+ + Y L+ V+ HSG
Sbjct: 345 IHLKRFT---SLDRSVEKIDKHVVYPLELDLKPFHCDPDINKELKYDLYGVVEHSGSPSY 401
Query: 177 GHYVVFINPKGDGKWCKFDDDVVSRCTKQEAI 272
GHYV + W +D V ++ A+
Sbjct: 402 GHYVCSVR-SSPSTWHLMNDSHVDLISEASAL 432
>07_01_0020 -
127855-129156,129240-129365,129811-129865,130047-130177
Length = 537
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 96 PYLQEVPSTPSHYTLHAVLVHSGDNHGGHYVVFINPKGDGK 218
P+ +E P P H+T +A +S D HGG V G G+
Sbjct: 393 PWERETPRPPPHHTSNAACSNSND-HGGRSGVTEEEGGSGR 432
>09_05_0019 - 20103044-20103760
Length = 238
Score = 29.1 bits (62), Expect = 3.7
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 315 WPCEGRLPSRRSCIRWL 265
W CE R+P RR C WL
Sbjct: 63 WVCEVRVPGRRGCRLWL 79
>08_02_1464 - 27317282-27318037
Length = 251
Score = 29.1 bits (62), Expect = 3.7
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 315 WPCEGRLPSRRSCIRWL 265
W CE R+P RR C WL
Sbjct: 67 WVCEVRVPGRRGCRLWL 83
>09_04_0075 -
14340458-14340551,14340643-14340814,14340895-14341066,
14341617-14341811,14341886-14342053,14342150-14342335,
14342797-14342881,14342896-14343206,14344222-14344569
Length = 576
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 126 SHYTLHAVLVHSGDNHGGHYVVFINPKGDGKWCKFDD 236
S Y L A +VH G G Y VF+ K + W + D
Sbjct: 515 SKYDLIANVVHDGKPGEGCYRVFVQRKSEEAWYEMQD 551
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,891,990
Number of Sequences: 37544
Number of extensions: 361277
Number of successful extensions: 908
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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