Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22h22
(715 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical pr... 103 1e-22
Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical pr... 103 1e-22
Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical pr... 103 1e-22
Z47811-2|CAA87786.2| 1307|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical pr... 51 7e-07
AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical ... 47 2e-05
AF100663-4|AAC68982.2| 440|Caenorhabditis elegans Hypothetical ... 46 4e-05
Z29095-12|CAB54287.2| 414|Caenorhabditis elegans Hypothetical p... 43 2e-04
Z29095-11|CAB54286.2| 426|Caenorhabditis elegans Hypothetical p... 43 2e-04
Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z83236-11|CAB05785.1| 489|Caenorhabditis elegans Hypothetical p... 42 6e-04
Z81468-3|CAB03876.1| 489|Caenorhabditis elegans Hypothetical pr... 42 6e-04
U32223-1|AAA74956.1| 489|Caenorhabditis elegans tRNA-guanine tr... 42 6e-04
AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical ... 40 0.001
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF003386-4|AAO38631.1| 452|Caenorhabditis elegans Hypothetical ... 39 0.003
AF003386-3|AAO38630.1| 499|Caenorhabditis elegans Hypothetical ... 39 0.003
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p... 37 0.016
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p... 37 0.016
Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical pr... 36 0.029
AB095019-1|BAC22611.1| 822|Caenorhabditis elegans ubiquitin-spe... 36 0.029
U97012-5|AAK39149.1| 515|Caenorhabditis elegans Hypothetical pr... 32 0.35
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr... 31 0.62
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr... 31 0.62
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr... 31 0.62
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr... 31 0.62
AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical ... 31 0.82
AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical ... 29 2.5
U53155-1|AAC48268.1| 393|Caenorhabditis elegans Oocyte maturati... 29 4.4
>Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical
protein H19N07.2c protein.
Length = 1135
Score = 103 bits (247), Expect = 1e-22
Identities = 61/146 (41%), Positives = 80/146 (54%), Gaps = 12/146 (8%)
Frame = +3
Query: 3 LHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSH---YTLHAVLVHSGDNH 173
+ L+RFQY K N+RF F E++NL + P Y+LHAVLVHSG+ H
Sbjct: 383 VQLMRFQYC---GVEQKINERFSFPEKMNLASCCELGPMLTEEDCVYSLHAVLVHSGEFH 439
Query: 174 GGHYVVFIN---------PKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKEDAPHMARKAT 326
GGHYV +IN P KWCKFDDDVVSR T +AI N+GG++ +
Sbjct: 440 GGHYVTYINVNLHESAVDPTSSAKWCKFDDDVVSRTTTDDAIVSNFGGEK------TMNS 493
Query: 327 SAYMLIYIQTTQLKYVLQDASESDIP 404
SAYML+Y++ + L +S IP
Sbjct: 494 SAYMLVYVRDNAIDQFLAPIPDSQIP 519
>Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical
protein H19N07.2b protein.
Length = 1130
Score = 103 bits (247), Expect = 1e-22
Identities = 61/146 (41%), Positives = 80/146 (54%), Gaps = 12/146 (8%)
Frame = +3
Query: 3 LHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSH---YTLHAVLVHSGDNH 173
+ L+RFQY K N+RF F E++NL + P Y+LHAVLVHSG+ H
Sbjct: 383 VQLMRFQYC---GVEQKINERFSFPEKMNLASCCELGPMLTEEDCVYSLHAVLVHSGEFH 439
Query: 174 GGHYVVFIN---------PKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKEDAPHMARKAT 326
GGHYV +IN P KWCKFDDDVVSR T +AI N+GG++ +
Sbjct: 440 GGHYVTYINVNLHESAVDPTSSAKWCKFDDDVVSRTTTDDAIVSNFGGEK------TMNS 493
Query: 327 SAYMLIYIQTTQLKYVLQDASESDIP 404
SAYML+Y++ + L +S IP
Sbjct: 494 SAYMLVYVRDNAIDQFLAPIPDSQIP 519
>Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical
protein H19N07.2a protein.
Length = 1133
Score = 103 bits (247), Expect = 1e-22
Identities = 61/146 (41%), Positives = 80/146 (54%), Gaps = 12/146 (8%)
Frame = +3
Query: 3 LHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSH---YTLHAVLVHSGDNH 173
+ L+RFQY K N+RF F E++NL + P Y+LHAVLVHSG+ H
Sbjct: 383 VQLMRFQYC---GVEQKINERFSFPEKMNLASCCELGPMLTEEDCVYSLHAVLVHSGEFH 439
Query: 174 GGHYVVFIN---------PKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKEDAPHMARKAT 326
GGHYV +IN P KWCKFDDDVVSR T +AI N+GG++ +
Sbjct: 440 GGHYVTYINVNLHESAVDPTSSAKWCKFDDDVVSRTTTDDAIVSNFGGEK------TMNS 493
Query: 327 SAYMLIYIQTTQLKYVLQDASESDIP 404
SAYML+Y++ + L +S IP
Sbjct: 494 SAYMLVYVRDNAIDQFLAPIPDSQIP 519
>Z47811-2|CAA87786.2| 1307|Caenorhabditis elegans Hypothetical protein
K02C4.3 protein.
Length = 1307
Score = 53.6 bits (123), Expect = 1e-07
Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 13/140 (9%)
Frame = +3
Query: 45 SVKFNDRFEFYEEINLDPYLQ---EVPSTPSH-YTLHAVLVHSGDNHGGHYVVFINPKG- 209
++K +R EE L + EVP H Y LHA++VHSG+ + GHY + K
Sbjct: 689 ALKTEERDCLAEEARLQEVIDQTYEVPELQQHKYELHAIIVHSGEANRGHYWTYKLKKSI 748
Query: 210 DG--KWCKFDDDVVSRCTKQEAIEYNYG-GKEDAPHMARKATSAYMLIYIQTTQLKYVLQ 380
DG +W K +D R + ++G G DAP SAYML+Y+++ V
Sbjct: 749 DGLEEWEKLNDQNADRVDWPKVESDSFGTGSRDAP-------SAYMLMYVRSDAEWLVSA 801
Query: 381 D---ASES--DIPPDLCDRI 425
D A E+ IPPDL +++
Sbjct: 802 DKLTALEAFETIPPDLQEKV 821
>Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical
protein T05H10.1 protein.
Length = 1326
Score = 51.2 bits (117), Expect = 7e-07
Identities = 28/72 (38%), Positives = 40/72 (55%)
Frame = +3
Query: 132 YTLHAVLVHSGDNHGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKEDAPHM 311
Y L +V+VHSG+ GGHY +I +W F+D V T E IE ++GG +
Sbjct: 404 YELFSVMVHSGNAAGGHYFAYIKNLDQDRWYVFNDTRVDFATPLE-IEKSFGGHPSGWNQ 462
Query: 312 ARKATSAYMLIY 347
+ T+AYML+Y
Sbjct: 463 SN--TNAYMLMY 472
>AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical
protein Y59A8B.2 protein.
Length = 357
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 96 PYLQEV-PSTPSHYTLHAVLVHSGDNHGGHYVVFINPKGDGKWCKFDDDVVSRC 254
PYL E+ P+ Y L+A +H+G + GHY + KW +FDD VV+ C
Sbjct: 286 PYLHEMAPAEKPVYKLYAATLHNGRLNSGHYTAVASHLRSDKWLRFDDSVVTPC 339
>AF100663-4|AAC68982.2| 440|Caenorhabditis elegans Hypothetical
protein K08B4.5 protein.
Length = 440
Score = 45.6 bits (103), Expect = 4e-05
Identities = 27/114 (23%), Positives = 59/114 (51%), Gaps = 11/114 (9%)
Frame = +3
Query: 45 SVKFNDRFEFYEEINLDPYLQEVPS----TPSHYTLHAVLVHSGDNHGGHYVVFINPKGD 212
+ K +D+FEF I++D +L++ T Y LHA++VH G++ GH++ + + + +
Sbjct: 110 ATKIHDKFEFPFHIHMDNFLEDASEDSQQTLHKYNLHAIIVHLGEDGKGHFMTYRSIRNN 169
Query: 213 -------GKWCKFDDDVVSRCTKQEAIEYNYGGKEDAPHMARKATSAYMLIYIQ 353
+W K DD + + + + ++G + + +SA +L+++Q
Sbjct: 170 CDVEGLATQWVKLDDAISTIIQRDQIASQSFGSG------SNEDSSAVLLMFLQ 217
>Z29095-12|CAB54287.2| 414|Caenorhabditis elegans Hypothetical
protein R10E11.3b protein.
Length = 414
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Frame = +3
Query: 3 LHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSHYTLHAVLVHSGDN-HGG 179
LHL RF++ + K + R F E+ L + Y L A +VH G + G
Sbjct: 270 LHLKRFKFVEPLNRHTKLSYRVVFPLELRLFNVSDDAEYGDRMYDLVATVVHCGATPNRG 329
Query: 180 HYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKEDA 302
HY+ + K + W FDDD+V + E++ G DA
Sbjct: 330 HYITLV--KSNSFWLVFDDDIVEKLEVSSMEEFS-GMSTDA 367
>Z29095-11|CAB54286.2| 426|Caenorhabditis elegans Hypothetical
protein R10E11.3a protein.
Length = 426
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Frame = +3
Query: 3 LHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSHYTLHAVLVHSGDN-HGG 179
LHL RF++ + K + R F E+ L + Y L A +VH G + G
Sbjct: 282 LHLKRFKFVEPLNRHTKLSYRVVFPLELRLFNVSDDAEYGDRMYDLVATVVHCGATPNRG 341
Query: 180 HYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKEDA 302
HY+ + K + W FDDD+V + E++ G DA
Sbjct: 342 HYITLV--KSNSFWLVFDDDIVEKLEVSSMEEFS-GMSTDA 379
>Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical
protein K09A9.4 protein.
Length = 716
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 123 PSHYTLHAVLVHSGDN-HGGHYVVFINPKGDGKWCKFDDDVVSRC 254
P+ Y L +VH G + GHYV + + D +W KFDD VV+RC
Sbjct: 486 PALYDLVGFVVHEGRSLEFGHYVSYCRHEQDNQWYKFDDMVVTRC 530
>Z83236-11|CAB05785.1| 489|Caenorhabditis elegans Hypothetical
protein C13B4.2 protein.
Length = 489
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 132 YTLHAVLVHSG-DNHGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGG 290
Y L ++ H G + GHYV ++ DGKW FDD+ V+ +EAI GG
Sbjct: 392 YDLKGIITHKGRSSQDGHYVAWMRSSEDGKWRLFDDEHVT-VVDEEAILKTSGG 444
>Z81468-3|CAB03876.1| 489|Caenorhabditis elegans Hypothetical
protein C13B4.2 protein.
Length = 489
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 132 YTLHAVLVHSG-DNHGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGG 290
Y L ++ H G + GHYV ++ DGKW FDD+ V+ +EAI GG
Sbjct: 392 YDLKGIITHKGRSSQDGHYVAWMRSSEDGKWRLFDDEHVT-VVDEEAILKTSGG 444
>U32223-1|AAA74956.1| 489|Caenorhabditis elegans tRNA-guanine
transglycosylase protein.
Length = 489
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 132 YTLHAVLVHSG-DNHGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGG 290
Y L ++ H G + GHYV ++ DGKW FDD+ V+ +EAI GG
Sbjct: 392 YDLKGIMTHKGRSSQDGHYVAWMRSSEDGKWRLFDDEHVT-VVDEEAILKTSGG 444
>AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical
protein Y71A12B.9 protein.
Length = 699
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Frame = +3
Query: 3 LHLLRFQYDP-QRDASVKFNDRFEFYEEINLDPYL-QEVPSTPSHYTLHAVLVHSGDNHG 176
LH+ RF+ + + DA + F ++++ +L + P Y+L +++VH G G
Sbjct: 597 LHMKRFRDNGGKNDAIIDFP-----MGQLDVTQFLTDDSDEAPCTYSLQSIIVHIGYGCG 651
Query: 177 -GHYVVFINPKGDGKWCKFDDDVV 245
GHY+ F K +G+W +FDD VV
Sbjct: 652 SGHYIAF--GKRNGRWFQFDDTVV 673
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical protein
F07A11.4 protein.
Length = 1095
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Frame = +3
Query: 78 EEINLDPYLQEVPSTPSH--YTLHAVLVHSGDNHGGHYVV------FINPKGDGKWCKFD 233
E +++ P+L E P+ Y L V+ HSG+++ GHY+ F + K +W FD
Sbjct: 986 ESLDMSPFLAETSPHPNSTMYDLTGVVCHSGNSYFGHYISMGRLADFDSSKTKIEWRNFD 1045
Query: 234 DDVVSR 251
D V+R
Sbjct: 1046 DSTVAR 1051
>AF003386-4|AAO38631.1| 452|Caenorhabditis elegans Hypothetical
protein F59E12.6b protein.
Length = 452
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +3
Query: 129 HYTLHAVLVHSGDN-HGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKEDAP 305
+Y L ++VH G + GH+ F+ +W KFDDD VS ++ ++G
Sbjct: 278 YYKLTGLIVHVGSSAKEGHFYSFVLQNESSRWSKFDDDRVSNVRWEDVAAQSFGTG---- 333
Query: 306 HMARKATSAYMLIY 347
+ K SA +L+Y
Sbjct: 334 --SSKTASACLLVY 345
>AF003386-3|AAO38630.1| 499|Caenorhabditis elegans Hypothetical
protein F59E12.6a protein.
Length = 499
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +3
Query: 129 HYTLHAVLVHSGDN-HGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIEYNYGGKEDAP 305
+Y L ++VH G + GH+ F+ +W KFDDD VS ++ ++G
Sbjct: 325 YYKLTGLIVHVGSSAKEGHFYSFVLQNESSRWSKFDDDRVSNVRWEDVAAQSFGTG---- 380
Query: 306 HMARKATSAYMLIY 347
+ K SA +L+Y
Sbjct: 381 --SSKTASACLLVY 392
>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 36.7 bits (81), Expect = 0.016
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 111 VPSTPSHYTLHAVLVHSGDN-HGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIE 275
+P Y L AV +H G+N GHY I + KW +++D+ V K E
Sbjct: 342 IPPPAEMYDLFAVTIHEGNNAECGHYYDLIKSPLNQKWYRYNDETVEAIPKPPGTE 397
>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 36.7 bits (81), Expect = 0.016
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 111 VPSTPSHYTLHAVLVHSGDN-HGGHYVVFINPKGDGKWCKFDDDVVSRCTKQEAIE 275
+P Y L AV +H G+N GHY I + KW +++D+ V K E
Sbjct: 342 IPPPAEMYDLFAVTIHEGNNAECGHYYDLIKSPLNQKWYRYNDETVEAIPKPPGTE 397
>Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical
protein F38B7.5 protein.
Length = 822
Score = 35.9 bits (79), Expect = 0.029
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +3
Query: 30 PQRDASVKFNDR-FEFYEEINLDPYLQEVPSTPSHYTLHAVLVHSGDN-HGGHYVVFINP 203
P+R K N ++E++ + YL+ P Y+L AV+ H GD+ + GHYV +
Sbjct: 725 PERSPMKKENTNGSSMHDELDENDYLKS-DIHPGTYSLVAVVCHLGDSPNKGHYVAYTKE 783
Query: 204 -KGDGKWCKFDDDVVSRCTKQEAIE 275
+ W + DD + +K + E
Sbjct: 784 LYKNSSWLRCSDDNIYAVSKNDVSE 808
>AB095019-1|BAC22611.1| 822|Caenorhabditis elegans
ubiquitin-specific protease protein.
Length = 822
Score = 35.9 bits (79), Expect = 0.029
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +3
Query: 30 PQRDASVKFNDR-FEFYEEINLDPYLQEVPSTPSHYTLHAVLVHSGDN-HGGHYVVFINP 203
P+R K N ++E++ + YL+ P Y+L AV+ H GD+ + GHYV +
Sbjct: 725 PERSPMKKENTNGSSMHDELDENDYLKS-DIHPGTYSLVAVVCHLGDSPNKGHYVAYTKE 783
Query: 204 -KGDGKWCKFDDDVVSRCTKQEAIE 275
+ W + DD + +K + E
Sbjct: 784 LYKNSSWLRCSDDNIYAVSKNDVSE 808
>U97012-5|AAK39149.1| 515|Caenorhabditis elegans Hypothetical
protein C04E6.5 protein.
Length = 515
Score = 32.3 bits (70), Expect = 0.35
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +3
Query: 132 YTLHAVLVHSGDNH-GGHYVVFINPKGDGKWCKFDDDVVSRCTKQE 266
Y+L A + H G+ GHY+ + + W DD++ T+ E
Sbjct: 453 YSLVAAICHLGETPTNGHYIAYTREDTENSWLYCSDDLIRPATRSE 498
>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 31.5 bits (68), Expect = 0.62
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 10/113 (8%)
Frame = +3
Query: 123 PSHYTLHAVLVHSGDNHGGHYVVFINPKGD--------GKWCKFDDDVVSRCTKQEAIEY 278
P Y L VL HSG GHY FI + + KW +D +VS + +
Sbjct: 2089 PLIYELVGVLAHSGIATAGHYYSFIKERREEFRDSPHYNKWHHINDMIVSPMSFNNIEDL 2148
Query: 279 NYGG--KEDAPHMARKATSAYMLIYIQTTQLKYVLQDASESDIPPDLCDRINE 431
YGG ++ + + Y+ + K +D + IP + DR+N+
Sbjct: 2149 WYGGTFTQEGVFIGLDERVRHWNAYVLFYEKK---RDEPTALIPRHIIDRLND 2198
>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 31.5 bits (68), Expect = 0.62
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 10/113 (8%)
Frame = +3
Query: 123 PSHYTLHAVLVHSGDNHGGHYVVFINPKGD--------GKWCKFDDDVVSRCTKQEAIEY 278
P Y L VL HSG GHY FI + + KW +D +VS + +
Sbjct: 2086 PLIYELVGVLAHSGIATAGHYYSFIKERREEFRDSPHYNKWHHINDMIVSPMSFNNIEDL 2145
Query: 279 NYGG--KEDAPHMARKATSAYMLIYIQTTQLKYVLQDASESDIPPDLCDRINE 431
YGG ++ + + Y+ + K +D + IP + DR+N+
Sbjct: 2146 WYGGTFTQEGVFIGLDERVRHWNAYVLFYEKK---RDEPTALIPRHIIDRLND 2195
>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 31.5 bits (68), Expect = 0.62
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 10/113 (8%)
Frame = +3
Query: 123 PSHYTLHAVLVHSGDNHGGHYVVFINPKGD--------GKWCKFDDDVVSRCTKQEAIEY 278
P Y L VL HSG GHY FI + + KW +D +VS + +
Sbjct: 2089 PLIYELVGVLAHSGIATAGHYYSFIKERREEFRDSPHYNKWHHINDMIVSPMSFNNIEDL 2148
Query: 279 NYGG--KEDAPHMARKATSAYMLIYIQTTQLKYVLQDASESDIPPDLCDRINE 431
YGG ++ + + Y+ + K +D + IP + DR+N+
Sbjct: 2149 WYGGTFTQEGVFIGLDERVRHWNAYVLFYEKK---RDEPTALIPRHIIDRLND 2198
>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 31.5 bits (68), Expect = 0.62
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 10/113 (8%)
Frame = +3
Query: 123 PSHYTLHAVLVHSGDNHGGHYVVFINPKGD--------GKWCKFDDDVVSRCTKQEAIEY 278
P Y L VL HSG GHY FI + + KW +D +VS + +
Sbjct: 2086 PLIYELVGVLAHSGIATAGHYYSFIKERREEFRDSPHYNKWHHINDMIVSPMSFNNIEDL 2145
Query: 279 NYGG--KEDAPHMARKATSAYMLIYIQTTQLKYVLQDASESDIPPDLCDRINE 431
YGG ++ + + Y+ + K +D + IP + DR+N+
Sbjct: 2146 WYGGTFTQEGVFIGLDERVRHWNAYVLFYEKK---RDEPTALIPRHIIDRLND 2195
>AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical
protein F09D1.1 protein.
Length = 602
Score = 31.1 bits (67), Expect = 0.82
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 132 YTLHAVLVHSGDNHGGHYVVFINPKGDGKWCKFDD 236
Y L A +VH G G+Y + I +G GKW + +D
Sbjct: 528 YDLVANVVHEGTFKDGNYRIQIVHEGSGKWFELED 562
>AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical
protein H34C03.2 protein.
Length = 900
Score = 29.5 bits (63), Expect = 2.5
Identities = 26/82 (31%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
Frame = +3
Query: 3 LHLLRFQYDPQRDASVKFNDRFEFYEEINLDPYLQEVPSTPSH----YTLHAVLVHSGDN 170
LHL RFQY + + LD L + + P+H Y L AV H G
Sbjct: 745 LHLKRFQYTKWSREKLTWEVVIPVR---GLD--LTDKVANPNHEKAIYDLIAVSRHYGSL 799
Query: 171 HGGHYVVFINPKGDGKWCKFDD 236
GGHY + KW F+D
Sbjct: 800 SGGHYTAIGYNDREQKWFDFND 821
>U53155-1|AAC48268.1| 393|Caenorhabditis elegans Oocyte maturation
defective protein2 protein.
Length = 393
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 259 SRKPSNTTTAGRKTPLTWPGKPQALTCLSTFKL 357
S+KP T AG + P +WP P L + +
Sbjct: 253 SKKPLETEEAGNRPPSSWPLDPSTFFALDSLNM 285
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,489,054
Number of Sequences: 27780
Number of extensions: 316790
Number of successful extensions: 805
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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