Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22h19
         (610 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0225 - 1650665-1652743                                           34   0.077
11_01_0519 + 4066776-4066892,4067042-4067099,4067322-4067608,406...    31   0.94 
08_02_1101 - 24308433-24308978,24309195-24309364,24309443-243095...    29   3.8  
07_03_0435 + 18182657-18183509,18184477-18184574,18184663-181848...    27   8.8  
02_05_1312 + 35642687-35642923,35643712-35643831,35644468-356445...    27   8.8  

>07_01_0225 - 1650665-1652743
          Length = 692

 Score = 34.3 bits (75), Expect = 0.077
 Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = -3

Query: 158 IQHPCVFF--LVGINQSFHWHFSFFAFLLVSFG 66
           + HPC+F    V + Q+ H  F FF FLLVSFG
Sbjct: 5   VLHPCIFLDLFVQVRQTSHTKF-FFLFLLVSFG 36


>11_01_0519 +
           4066776-4066892,4067042-4067099,4067322-4067608,
           4067706-4067822,4067898-4067958,4068042-4068133,
           4068547-4068632,4068926-4068975,4069077-4069117,
           4069222-4069392,4069875-4069942,4070088-4070148,
           4070471-4070757,4072008-4072172,4072759-4072760,
           4072829-4073139,4073600-4073787,4075231-4075482,
           4076035-4076114,4076199-4076399,4076959-4077014,
           4077137-4077328
          Length = 980

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = -3

Query: 587 FWVAQFYTYKPIQSKSTFKICINTNTYMIVTILTPLFDIQIILSFNSAPLS 435
           +W+ QF ++   Q + + + C   N YMIV  LT    +Q   S+N+ PL+
Sbjct: 351 WWLIQFISF---QLELSAQSCFMKNHYMIVLRLTSGILVQFWCSYNTLPLN 398


>08_02_1101 -
           24308433-24308978,24309195-24309364,24309443-24309542,
           24310337-24310500,24310960-24310996,24311222-24311262,
           24313877-24314093
          Length = 424

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
 Frame = +2

Query: 2   VFGYGQLVDD---GGNQRDLARAKNQKKQVEMQKKKN 103
           VF   Q+VDD    GN  DLA AK + K+ E +K  N
Sbjct: 220 VFSSDQVVDDLLANGNMIDLAGAKVEIKKAEPKKSSN 256


>07_03_0435 +
           18182657-18183509,18184477-18184574,18184663-18184833,
           18185524-18185624,18185702-18185837,18186007-18186057,
           18186202-18186489,18186610-18186844,18186924-18187204,
           18187336-18187557
          Length = 811

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +2

Query: 29  DGGNQRDLARAKNQKKQVEMQKKKNASEKTGLSLQERKHRDA 154
           +GG     A A+ +KK  E + K+ A E      +E + RDA
Sbjct: 195 NGGGAHAAAGAEARKKAEEAEAKRKAEEAEARRKKEEEERDA 236


>02_05_1312 +
           35642687-35642923,35643712-35643831,35644468-35644534,
           35644673-35644694,35645053-35645152,35645282-35645414,
           35645483-35645517,35645708-35646409,35646789-35647121,
           35647337-35647601,35647665-35647999,35648105-35648177,
           35648271-35648356,35648479-35648598,35648674-35648741,
           35648825-35648882
          Length = 917

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = +2

Query: 5   FGYGQLVDDGGNQRDLARAKNQKKQVEMQKKKNASE 112
           + +G+++ DG NQRD  + ++  +  E  K   + E
Sbjct: 263 YAFGKILSDGENQRDSLKCRSDTQNSESNKGMASDE 298


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,134,757
Number of Sequences: 37544
Number of extensions: 192443
Number of successful extensions: 375
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 374
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)