Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22h19
         (610 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC087079-3|AAK27862.1|   82|Caenorhabditis elegans Hypothetical ...    45   4e-05
Z81115-5|CAB03295.1|  482|Caenorhabditis elegans Hypothetical pr...    31   0.85 
Z48006-3|CAB62803.1|  449|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z48006-2|CAA88050.1|  495|Caenorhabditis elegans Hypothetical pr...    30   1.1  
AL033514-7|CAA22114.1|  648|Caenorhabditis elegans Hypothetical ...    29   2.0  
Z79601-6|CAB01887.1|  872|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z79596-9|CAB01859.1|  872|Caenorhabditis elegans Hypothetical pr...    28   4.5  
AF149288-1|AAF99087.1|  644|Caenorhabditis elegans KRP85 protein.      28   4.5  
AC024801-1|AAK68513.1|  646|Caenorhabditis elegans Kinesin-like ...    28   4.5  

>AC087079-3|AAK27862.1|   82|Caenorhabditis elegans Hypothetical
           protein Y37E3.4 protein.
          Length = 82

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 23/43 (53%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
 Frame = +2

Query: 35  GNQRDLARAKNQKKQVEMQKKKNASEK---TGLSLQERKHRDA 154
           GNQRDLAR KNQKK  + +K++ AS +    GLS+  R +RDA
Sbjct: 4   GNQRDLAREKNQKKLADQKKRQGASGQDGNAGLSMDARMNRDA 46


>Z81115-5|CAB03295.1|  482|Caenorhabditis elegans Hypothetical
           protein T05D4.5 protein.
          Length = 482

 Score = 30.7 bits (66), Expect = 0.85
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +2

Query: 41  QRDLARAKNQKKQVEMQKKKNASEKTGLSLQERKHRDA 154
           +RD  R K  +K+ E +KKK+A EK     +E+K +DA
Sbjct: 393 ERDERRTK--RKEEEEKKKKDAEEKKKKDAEEKKKKDA 428



 Score = 28.3 bits (60), Expect = 4.5
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2

Query: 62  KNQKKQVEMQKKKNASEKTGLSLQERKHRDA 154
           + +KK  E +KKK+A EK     ++ K +DA
Sbjct: 406 EKKKKDAEEKKKKDAEEKKKKDAEDEKKKDA 436


>Z48006-3|CAB62803.1|  449|Caenorhabditis elegans Hypothetical
           protein F19C6.2b protein.
          Length = 449

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = +2

Query: 26  DDGGNQRDLARAKNQKKQVEMQKKKNASEK 115
           D  GN+ D + AK  KKQV  +KK+NA  K
Sbjct: 298 DCSGNEDDSSNAKYAKKQVFKKKKRNAFGK 327


>Z48006-2|CAA88050.1|  495|Caenorhabditis elegans Hypothetical
           protein F19C6.2a protein.
          Length = 495

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = +2

Query: 26  DDGGNQRDLARAKNQKKQVEMQKKKNASEK 115
           D  GN+ D + AK  KKQV  +KK+NA  K
Sbjct: 344 DCSGNEDDSSNAKYAKKQVFKKKKRNAFGK 373


>AL033514-7|CAA22114.1|  648|Caenorhabditis elegans Hypothetical
           protein Y75B8A.7 protein.
          Length = 648

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +2

Query: 56  RAKNQKKQVEMQKKKNASEKTGLSLQERKHR 148
           +   +KK++E  KK+ A +K  LSL + K++
Sbjct: 255 KMNGEKKKIEKDKKRKAGDKADLSLDDGKNK 285


>Z79601-6|CAB01887.1|  872|Caenorhabditis elegans Hypothetical
           protein K09A9.6 protein.
          Length = 872

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = +2

Query: 26  DDGGNQRDLARAKNQKKQVEMQKKKNASEKT-GLSLQERKHRDA 154
           DD GN  D    KN+K  VE +  K   EK  G       HR+A
Sbjct: 294 DDDGNDDDEEDGKNKKTSVEAKSDKVVEEKNDGDDEPHVSHREA 337


>Z79596-9|CAB01859.1|  872|Caenorhabditis elegans Hypothetical
           protein K09A9.6 protein.
          Length = 872

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = +2

Query: 26  DDGGNQRDLARAKNQKKQVEMQKKKNASEKT-GLSLQERKHRDA 154
           DD GN  D    KN+K  VE +  K   EK  G       HR+A
Sbjct: 294 DDDGNDDDEEDGKNKKTSVEAKSDKVVEEKNDGDDEPHVSHREA 337


>AF149288-1|AAF99087.1|  644|Caenorhabditis elegans KRP85 protein.
          Length = 644

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +2

Query: 29  DGGNQRDLARAKNQKKQVEMQKKKNASEK 115
           D  NQ +   AK Q+++VEM+KK+   E+
Sbjct: 365 DDENQEEAWEAKMQEREVEMEKKRKILEE 393


>AC024801-1|AAK68513.1|  646|Caenorhabditis elegans Kinesin-like
           protein protein 20 protein.
          Length = 646

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +2

Query: 29  DGGNQRDLARAKNQKKQVEMQKKKNASEK 115
           D  NQ +   AK Q+++VEM+KK+   E+
Sbjct: 367 DDENQEEAWEAKMQEREVEMEKKRKILEE 395


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,587,913
Number of Sequences: 27780
Number of extensions: 209302
Number of successful extensions: 596
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 594
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)