Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22h18
(699 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22180-8|CAA80177.2| 107|Caenorhabditis elegans Hypothetical pr... 35 0.064
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 32 0.34
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 31 0.60
Z92777-6|CAE17682.1| 353|Caenorhabditis elegans Hypothetical pr... 31 0.79
Z74041-2|CAA98521.1| 237|Caenorhabditis elegans Hypothetical pr... 31 0.79
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 31 1.0
CU457744-3|CAM36369.1| 247|Caenorhabditis elegans Hypothetical ... 31 1.0
AF003132-1|AAB54133.3| 798|Caenorhabditis elegans Hypothetical ... 30 1.4
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 30 1.4
AC006714-5|AAN84811.1| 224|Caenorhabditis elegans Hypothetical ... 30 1.4
AF016448-8|AAW30665.1| 536|Caenorhabditis elegans Smek (dictyos... 30 1.8
AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek (dictyos... 30 1.8
Z66565-5|CAA91482.2| 766|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z81558-3|CAB04541.1| 356|Caenorhabditis elegans Hypothetical pr... 29 4.2
L10986-6|AAA28015.1| 262|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z81525-7|CAE17780.1| 263|Caenorhabditis elegans Hypothetical pr... 28 5.6
U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical p... 28 5.6
U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical pr... 28 5.6
AL137227-7|CAB70235.1| 787|Caenorhabditis elegans Hypothetical ... 28 5.6
U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis ... 28 7.4
U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical pr... 28 7.4
AF098997-8|AAC68719.3| 335|Caenorhabditis elegans Serpentine re... 28 7.4
Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical pr... 27 9.8
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 27 9.8
AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical ... 27 9.8
AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical ... 27 9.8
>Z22180-8|CAA80177.2| 107|Caenorhabditis elegans Hypothetical
protein K11H3.5 protein.
Length = 107
Score = 34.7 bits (76), Expect = 0.064
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +2
Query: 437 EKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYEN 598
EK KIAK+L + K Q+ E L++ + E D E E+K+E + +Y N
Sbjct: 29 EKHKIAKMLQNEQ-KSLQMLEEEQALLEKVVETLSNDIEEKEEKIEKLRRSYTN 81
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 32.3 bits (70), Expect = 0.34
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Frame = +2
Query: 389 TKPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPER---CSGLVKDIREKFGKDSNED 559
T +II++ +K + DE K + K ++ + E +L ++ + VK++++ + E
Sbjct: 1067 TAKEIIQKQAKKI-DELKEECRKRKNEASRLERKLEDKEAMMADCVKELKDSHKERLKEM 1125
Query: 560 EDKVESV---DETYENPYIVDKSQLEEIERK 643
E KVE V + EN KSQ+E +R+
Sbjct: 1126 EQKVEDVKRKNSKLENENSTQKSQIETFQRE 1156
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 31.5 bits (68), Expect = 0.60
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +2
Query: 425 MTDEEKSKIAKLLHDVAVKENQL-PERCSGLVKDIREKFGKDSNEDEDKVESVDETYENP 601
+T E+K K + +N+L PE ++ D EKF +D + +DK E+ +E
Sbjct: 516 VTAEDKGTGNKNKITITNDQNRLSPEDIEAMINDA-EKFAEDDKKVKDKAEARNELESYA 574
Query: 602 YIVDKSQLEEIER 640
Y + K+Q+E+ E+
Sbjct: 575 YNL-KNQIEDKEK 586
Score = 29.1 bits (62), Expect = 3.2
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 12/98 (12%)
Frame = +2
Query: 407 EQFSKMMTDEEK-SKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVD 583
E M+ D EK ++ K + D A N+L L I +K DED ++++
Sbjct: 541 EDIEAMINDAEKFAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKKTIE 600
Query: 584 ETYEN--PYIVD---------KSQLEEIERKLEPLMSK 664
E E ++ K Q +++E K++P++SK
Sbjct: 601 EAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSK 638
>Z92777-6|CAE17682.1| 353|Caenorhabditis elegans Hypothetical
protein C17H1.9 protein.
Length = 353
Score = 31.1 bits (67), Expect = 0.79
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Frame = +2
Query: 386 NTKPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDED 565
N +I + + +E K+ +AKL + K N+ E+ V+ R K + ED
Sbjct: 69 NAAEEIHRKSVEKFNEEHKTYMAKLEKQLE-KINEKGEQDVKEVEQQRVKLEEQRTEDLV 127
Query: 566 KV-ESVDETYENPYI-VDKSQLEEIERKLEPLMSKNKRNS 679
K ES+ E Y ++K ++E+ K+E L +K+K+N+
Sbjct: 128 KHHESMANLSEKKYKEIEKQRVEQHMLKMEELNAKSKQNT 167
>Z74041-2|CAA98521.1| 237|Caenorhabditis elegans Hypothetical
protein T03F7.6 protein.
Length = 237
Score = 31.1 bits (67), Expect = 0.79
Identities = 22/57 (38%), Positives = 29/57 (50%)
Frame = +1
Query: 133 IILFLVTVCCIFGYARNVYREFLFVLPSTCLHQNEFISWCFKFIKPTTKPN*KIAKI 303
I LFL C IFG +Y FVL +T L+ + + F+ +TK KIAKI
Sbjct: 140 ISLFLSFWCLIFGIIPFIYLSEYFVLANTTLNLTATV-FPILFLAGSTKIRKKIAKI 195
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 30.7 bits (66), Expect = 1.0
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +2
Query: 425 MTDEEKSKIAKLLHDVAVKENQL-PERCSGLVKDIREKFGKDSNEDEDKVESVDETYENP 601
+T E+K K + +N+L PE ++ D EKF +D + +DK E+ +E
Sbjct: 516 VTAEDKGTGNKNKITITNDQNRLSPEDIERMINDA-EKFAEDDKKVKDKAEARNELESYA 574
Query: 602 YIVDKSQLEEIER 640
Y + K+Q+E+ E+
Sbjct: 575 YNL-KNQIEDKEK 586
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 12/98 (12%)
Frame = +2
Query: 407 EQFSKMMTDEEK-SKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVD 583
E +M+ D EK ++ K + D A N+L L I +K DED ++++
Sbjct: 541 EDIERMINDAEKFAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKKTIE 600
Query: 584 ETYEN--PYIVD---------KSQLEEIERKLEPLMSK 664
E E ++ K Q +++E K++P++SK
Sbjct: 601 EAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSK 638
>CU457744-3|CAM36369.1| 247|Caenorhabditis elegans Hypothetical
protein T06A10.4 protein.
Length = 247
Score = 30.7 bits (66), Expect = 1.0
Identities = 26/105 (24%), Positives = 51/105 (48%)
Frame = +2
Query: 287 KKLQKSSFRPH*IDLTMGASMPMVTKATVYFINNTKPDIIEQFSKMMTDEEKSKIAKLLH 466
+K +K+ +D+ M + K + F N + EQ +K T +K K+AK
Sbjct: 23 EKAKKAIVEIERLDILAKKEMEVAKKHKIEFFANYEEMTAEQKTKAFTFMQK-KMAK--- 78
Query: 467 DVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENP 601
V+ +Q E SGL +++ +GK E++ +E++++ + P
Sbjct: 79 -VSEYSDQKIEIASGLKVLLKDVYGKFMEEEQKFIENLNKIPKAP 122
>AF003132-1|AAB54133.3| 798|Caenorhabditis elegans Hypothetical
protein F37E3.1 protein.
Length = 798
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/74 (27%), Positives = 33/74 (44%)
Frame = +2
Query: 449 IAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLE 628
+ KL + V E + E L + K ++ +E+ D DET E + D LE
Sbjct: 640 LEKLTRQINVVEKDIKE----LTEKTENKIKEEDDEESDIKMDEDETKEEKFKQDLEDLE 695
Query: 629 EIERKLEPLMSKNK 670
+ KLE +++ K
Sbjct: 696 NNKEKLERMVTFQK 709
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Frame = +2
Query: 386 NTKPDIIEQFSKMMTDEEKSKIAKLLHDVAVK---ENQLPERCSGLVKDIREKFGKDSNE 556
NTK D+ F K T +E K + D + E + ER + +D+R K K +
Sbjct: 50 NTKNDL--GFCKYTTHDENLKNSYKNSDKKWRMGFEKRFLERIRRIHEDVRRKIQKHEDR 107
Query: 557 ---DEDKVESVDETYENPYIVDKSQLEEIERKLEPLMSK 664
+ + +S +ET+ + + + E++ +K+E LM +
Sbjct: 108 LAVTQGESKSAEETFGQKILEIEQRREQLTKKMEDLMDE 146
>AC006714-5|AAN84811.1| 224|Caenorhabditis elegans Hypothetical
protein Y119D3B.12b protein.
Length = 224
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Frame = +2
Query: 386 NTKPDIIEQFSKMMTDEEKSKIAKLLHDVAVK---ENQLPERCSGLVKDIREKFGKDSNE 556
NTK D+ F K T +E K + D + E + ER + +D+R K K +
Sbjct: 50 NTKNDL--GFCKYTTHDENLKNSYKNSDKKWRMGFEKRFLERIRRIHEDVRRKIQKHEDR 107
Query: 557 ---DEDKVESVDETYENPYIVDKSQLEEIERKLEPLMSK 664
+ + +S +ET+ + + + E++ +K+E LM +
Sbjct: 108 LAVTQGESKSAEETFGQKILEIEQRREQLTKKMEDLMDE 146
>AF016448-8|AAW30665.1| 536|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform c protein.
Length = 536
Score = 29.9 bits (64), Expect = 1.8
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
Frame = +2
Query: 407 EQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDE 586
E +M D+EK +++ K+ + +D+ K +E E +VESVD
Sbjct: 29 ESLKRMEVDDEKEPEEEIVEKTEEKQEE---------EDVTVKL---EDETETEVESVDG 76
Query: 587 TYENPYIVDKSQL--EEIERKLEPLMSKNKRNSVASP 691
E +VD+ Q+ E + K E L K + + P
Sbjct: 77 GQEEKEVVDEKQVDAERVNTKTEELSPKKEVKAEEDP 113
>AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform a protein.
Length = 1085
Score = 29.9 bits (64), Expect = 1.8
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
Frame = +2
Query: 407 EQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDE 586
E +M D+EK +++ K+ + +D+ K +E E +VESVD
Sbjct: 29 ESLKRMEVDDEKEPEEEIVEKTEEKQEE---------EDVTVKL---EDETETEVESVDG 76
Query: 587 TYENPYIVDKSQL--EEIERKLEPLMSKNKRNSVASP 691
E +VD+ Q+ E + K E L K + + P
Sbjct: 77 GQEEKEVVDEKQVDAERVNTKTEELSPKKEVKAEEDP 113
>Z66565-5|CAA91482.2| 766|Caenorhabditis elegans Hypothetical
protein T04F8.6 protein.
Length = 766
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/62 (24%), Positives = 36/62 (58%)
Frame = +2
Query: 488 QLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLEEIERKLEPLMSKN 667
++ ERC G + + EKF + +E + ++E++++ +V +++ ++ KL+ + N
Sbjct: 313 EMEERCRGRIAAMEEKFRMERHEMQKEIENIEKDLS---LVRQNE-TSLKNKLQLVERHN 368
Query: 668 KR 673
KR
Sbjct: 369 KR 370
>Z81558-3|CAB04541.1| 356|Caenorhabditis elegans Hypothetical
protein F59D12.3 protein.
Length = 356
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 524 IREKFGKDSNEDEDKVESVDETYENPYIVDKSQ 622
IREK GK+ D + + + YEN Y + K Q
Sbjct: 318 IREKIGKEMRSDPEAMRLLHLIYENDYRIFKLQ 350
>L10986-6|AAA28015.1| 262|Caenorhabditis elegans Hypothetical
protein F10E9.4 protein.
Length = 262
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 440 KSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVE 574
K + K++ +KE + E + D++EK ++ +EDED E
Sbjct: 218 KGEYVKMIEKAEIKEEEEVEDEADEETDVKEKVKEEEDEDEDMEE 262
>Z81525-7|CAE17780.1| 263|Caenorhabditis elegans Hypothetical
protein F33A8.10 protein.
Length = 263
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/87 (25%), Positives = 40/87 (45%)
Frame = +2
Query: 404 IEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVD 583
IE+F K M+DE +S DV K+ L ++ + + + + K++ E+ +V +
Sbjct: 170 IEEFMKTMSDERQSMYTNYRRDVIDKD--LEDKRRNVDRAV-SQMSKEAVEEFQRVVRIM 226
Query: 584 ETYENPYIVDKSQLEEIERKLEPLMSK 664
P ++EEI KL + K
Sbjct: 227 HDPSQPEKEKLKKIEEIYSKLPDSIRK 253
>U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical
protein C33G8.3 protein.
Length = 142
Score = 28.3 bits (60), Expect = 5.6
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Frame = +2
Query: 338 GASMPMVTKATVYFINNTKPDIIEQFSKMMT--DEEKSKIAKLLHDVAVKENQLPERCSG 511
GA + V +A+ + + +I+E+ K+ +E K K K K+++ E
Sbjct: 36 GAELDRVKRASDHKLEKKLDEIMEKVEKIKDKIEENKEKREKKNKKKGNKKDEDEEEEED 95
Query: 512 LVKDIREKF-GKDSNEDEDKVESVDETYENPYIVDKSQLEEIERK 643
K ++K KDS E+EDK + D+ +N D+S+ E +RK
Sbjct: 96 KDKKKKDKKKNKDSEEEEDKKK--DKKKKND-SSDESEEENKKRK 137
>U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical
protein F56C9.10a protein.
Length = 1028
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Frame = +2
Query: 392 KPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGK--DS-NEDE 562
KP+++E+ + +E+K K+ + + KE + + DS EDE
Sbjct: 49 KPEVLEEVVEKNREEDKEKVEETVAPTIEKEKNISGDLLDFSSSDKSSLSSRPDSPEEDE 108
Query: 563 DKVESVDETYENPYIVDKSQ 622
D V V+ T +P SQ
Sbjct: 109 DAVPVVNRTTTSPPTSPPSQ 128
>AL137227-7|CAB70235.1| 787|Caenorhabditis elegans Hypothetical
protein F58D5.6 protein.
Length = 787
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/79 (24%), Positives = 36/79 (45%)
Frame = +2
Query: 227 TKMNSLVGASNL*NQPPNQIKKLQKSSFRPH*IDLTMGASMPMVTKATVYFINNTKPDII 406
+K+N L P ++KL+ +P L++ S+ +++ ++
Sbjct: 306 SKLNKYYEPEKLFTSLPKCVEKLKALKTQPDFDKLSIIDSVVNTFHENARELHDKMSNVH 365
Query: 407 EQFSKMMTDEEKSKIAKLL 463
+FSK+ TDEE KI +L
Sbjct: 366 GEFSKVYTDEEAKKIHNIL 384
>U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis
zeste white 10 (drosophila) homolog protein 1 protein.
Length = 778
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/95 (18%), Positives = 45/95 (47%)
Frame = +2
Query: 380 INNTKPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNED 559
+ + DI++++ + + AKL+ D + E + + ++ ++ KDS E
Sbjct: 19 LTSISQDIVDKYGNLKVSLNVNATAKLIFDRLENLEDIAEMSTRNLSNLIDQTAKDSPEM 78
Query: 560 EDKVESVDETYENPYIVDKSQLEEIERKLEPLMSK 664
+++S ++ EN + ++ +E +L + SK
Sbjct: 79 LAEIKSQAQSCEN-LVEFLQSMKNVEEQLIIMRSK 112
>U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical
protein F56C9.10b protein.
Length = 1031
Score = 27.9 bits (59), Expect = 7.4
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Frame = +2
Query: 392 KPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFG-----KDS-N 553
KP+++E+ + +E+K K+ + + KE + + KDS
Sbjct: 49 KPEVLEEVVEKNREEDKEKVEETVAPTIEKEKNISGDLLDFSSSDKSSLSSRPNVKDSPE 108
Query: 554 EDEDKVESVDETYENPYIVDKSQ 622
EDED V V+ T +P SQ
Sbjct: 109 EDEDAVPVVNRTTTSPPTSPPSQ 131
>AF098997-8|AAC68719.3| 335|Caenorhabditis elegans Serpentine
receptor, class i protein54 protein.
Length = 335
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -1
Query: 459 SFAIFDFSSSVIIFENCSMMSGFVLFIKYTVALVTI 352
+F+I++FSS + S++ GF+ F + + LV I
Sbjct: 181 NFSIYEFSSKFLALIIFSILGGFLSFTVFILVLVNI 216
>Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical
protein F49E2.5d protein.
Length = 889
Score = 27.5 bits (58), Expect = 9.8
Identities = 29/111 (26%), Positives = 43/111 (38%), Gaps = 14/111 (12%)
Frame = +2
Query: 386 NTKPDIIEQFSKMMTDEEKSKIAKLLHD------VAVKENQLPERCSGLVKDIREKFGKD 547
+T P E K D++KS+ K+ + Q+ E+ V + +K D
Sbjct: 368 STTPPATENKKKNKKDKKKSESEKVTEQPVESAPAPPQVEQVVEKVEKPVAPVSKKPTAD 427
Query: 548 SNED--------EDKVESVDETYENPYIVDKSQLEEIERKLEPLMSKNKRN 676
N D +K ESV+E E P IV+ E KNK+N
Sbjct: 428 DNMDFLDFVTAKPEKTESVEEHIEAPMIVEPVHAENETAAAAGGKKKNKKN 478
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +2
Query: 518 KDIREKFGKDSNEDEDK--VESVDETYENPYIVDKSQLEEIERKLEPLMSKNKRNS 679
KD ++K KD +EDEDK + + ++ DK + E+ +++ E K+K+ +
Sbjct: 335 KDKKKKDDKDDDEDEDKDDKKKKKDDVDDDMKKDKKKKEDDDKEDEDDKKKDKKKN 390
>AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical
protein Y32B12B.2 protein.
Length = 789
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 482 ENQLPERCSGLVKD-IREKFGKDSNEDEDKVESVDETYEN 598
E++L +R GL D E G+D EDED+ E E E+
Sbjct: 710 EDELKDRKHGLFDDEASESDGEDEFEDEDEEEPEGEDLED 749
>AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical
protein Y54E10A.12 protein.
Length = 547
Score = 27.5 bits (58), Expect = 9.8
Identities = 24/84 (28%), Positives = 44/84 (52%)
Frame = +2
Query: 398 DIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVES 577
+II+ F++ + E K +L+ +A E QL + +K +R KD N+ + ++
Sbjct: 270 EIIDLFNQFKSSMESQK--DILNTLAGLEEQLGDHQLE-IKSVR----KDINKLKG-LQG 321
Query: 578 VDETYENPYIVDKSQLEEIERKLE 649
Y+ + KS LEEI+RK++
Sbjct: 322 KQSFYKEELKLKKSALEEIQRKID 345
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,968,141
Number of Sequences: 27780
Number of extensions: 356048
Number of successful extensions: 1262
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1260
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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