Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22h16
(758 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81054-4|CAB02885.3| 321|Caenorhabditis elegans Hypothetical pr... 38 0.008
L02877-1|AAA50614.1| 321|Caenorhabditis elegans homeoprotein pr... 38 0.008
Z69659-1|CAA93483.1| 329|Caenorhabditis elegans Hypothetical pr... 36 0.024
U41021-4|AAA82334.1| 348|Caenorhabditis elegans Uncoordinated p... 35 0.072
AF035583-1|AAD09435.1| 348|Caenorhabditis elegans UNC-97 protein. 35 0.072
U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeo... 34 0.095
AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox ... 34 0.095
Z81054-5|CAE17755.1| 313|Caenorhabditis elegans Hypothetical pr... 33 0.17
M20244-1|AAA28108.1| 313|Caenorhabditis elegans protein ( C.ele... 33 0.17
Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical p... 33 0.22
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical p... 33 0.22
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 33 0.22
Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical p... 33 0.22
Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical pr... 33 0.22
U55375-4|AAC69042.3| 287|Caenorhabditis elegans Lim domain fami... 33 0.22
U20861-6|AAA62294.1| 256|Caenorhabditis elegans Temporarily ass... 33 0.29
Z47811-3|CAA87787.2| 723|Caenorhabditis elegans Hypothetical pr... 31 0.67
AF489839-1|AAN09795.1| 723|Caenorhabditis elegans lim and trans... 31 0.67
AY349017-1|AAQ55497.1| 474|Caenorhabditis elegans NHR-91A protein. 31 0.89
AL132841-4|CAB60329.2| 474|Caenorhabditis elegans Hypothetical ... 31 0.89
AF273835-1|AAG15183.1| 476|Caenorhabditis elegans nuclear recep... 31 0.89
AF273834-1|AAG15182.1| 475|Caenorhabditis elegans nuclear recep... 31 0.89
AF273833-1|AAG15181.1| 475|Caenorhabditis elegans nuclear recep... 31 0.89
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 30 1.6
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 30 1.6
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 30 2.1
Z71261-2|CAA95805.1| 813|Caenorhabditis elegans Hypothetical pr... 29 2.7
U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily ass... 29 2.7
U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily ass... 29 2.7
U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily ass... 29 2.7
AF039053-17|AAC25882.2| 279|Caenorhabditis elegans Serpentine r... 29 3.6
AF016683-8|AAM97998.1| 480|Caenorhabditis elegans Hypothetical ... 29 3.6
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical p... 28 6.3
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 28 6.3
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 28 6.3
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 28 6.3
AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical ... 28 6.3
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 28 6.3
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 28 6.3
Z72504-6|CAA96604.2| 906|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z66499-2|CAA91297.1| 183|Caenorhabditis elegans Hypothetical pr... 28 8.3
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 28 8.3
U73946-1|AAB18328.1| 452|Caenorhabditis elegans CeLIM-7 protein. 28 8.3
U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of fu... 28 8.3
U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of fu... 28 8.3
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 28 8.3
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 28 8.3
U34955-1|AAC47115.1| 183|Caenorhabditis elegans cyclophilin iso... 28 8.3
AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger p... 28 8.3
AL132952-10|CAB63384.1| 591|Caenorhabditis elegans Hypothetical... 28 8.3
AF067210-1|AAC16985.1| 452|Caenorhabditis elegans Lim domain fa... 28 8.3
AC103567-8|AAL35729.1| 305|Caenorhabditis elegans Hypothetical ... 28 8.3
AC006617-5|AAF39775.1| 325|Caenorhabditis elegans Serpentine re... 28 8.3
>Z81054-4|CAB02885.3| 321|Caenorhabditis elegans Hypothetical
protein F01D4.6a protein.
Length = 321
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/60 (23%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 465 CSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICYGQVFC-EPCFQHHVLHR 641
C+ C + I + +D +++H +C KC C + + G+++C + ++ H +HR
Sbjct: 29 CNCCNEQIYDRYIYRMDNRSYHENCVKCTICESPLAEKCFWKNGRIYCSQHYYKDHSIHR 88
>L02877-1|AAA50614.1| 321|Caenorhabditis elegans homeoprotein
protein.
Length = 321
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/60 (23%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 465 CSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICYGQVFC-EPCFQHHVLHR 641
C+ C + I + +D +++H +C KC C + + G+++C + ++ H +HR
Sbjct: 29 CNCCNEQIYDRYIYRMDNRSYHENCVKCTICESPLAEKCFWKNGRIYCSQHYYKDHSIHR 88
>Z69659-1|CAA93483.1| 329|Caenorhabditis elegans Hypothetical
protein F07C6.1 protein.
Length = 329
Score = 36.3 bits (80), Expect = 0.024
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +3
Query: 465 CSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICYGQVFCEPCF 620
C++C Q ++ ++ + + +H++ KC C V S+ +FC CF
Sbjct: 143 CNKCKQHVDNSDLLTYQENPYHAYHFKCTTCKKVLESDARTIKDDLFCPRCF 194
>U41021-4|AAA82334.1| 348|Caenorhabditis elegans Uncoordinated
protein 97 protein.
Length = 348
Score = 34.7 bits (76), Expect = 0.072
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +3
Query: 456 RSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICYGQVFCEPC 617
R VC +C MI++ I+ +FH + KC C+ ++ G+++C C
Sbjct: 143 RYVCHKCHAMIDDGQHIKFRGDSFHPYHFKCKRCNNELTTASREVNGELYCLRC 196
>AF035583-1|AAD09435.1| 348|Caenorhabditis elegans UNC-97 protein.
Length = 348
Score = 34.7 bits (76), Expect = 0.072
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +3
Query: 456 RSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICYGQVFCEPC 617
R VC +C MI++ I+ +FH + KC C+ ++ G+++C C
Sbjct: 143 RYVCHKCHAMIDDGQHIKFRGDSFHPYHFKCKRCNNELTTASREVNGELYCLRC 196
>U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeobox
protein 14 protein.
Length = 351
Score = 34.3 bits (75), Expect = 0.095
Identities = 14/66 (21%), Positives = 29/66 (43%)
Frame = +3
Query: 423 SKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICYGQV 602
S A N + ++CS C + I + +++ + +HS C +C C + + +
Sbjct: 34 SNVNAGHPNNEEAICSLCDKKIRDRFVSKVNGRCYHSSCLRCSTCKDELGATCFLREDSM 93
Query: 603 FCEPCF 620
+C F
Sbjct: 94 YCRAHF 99
>AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox
protein CEH-14 protein.
Length = 351
Score = 34.3 bits (75), Expect = 0.095
Identities = 14/66 (21%), Positives = 29/66 (43%)
Frame = +3
Query: 423 SKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICYGQV 602
S A N + ++CS C + I + +++ + +HS C +C C + + +
Sbjct: 34 SNVNAGHPNNEEAICSLCDKKIRDRFVSKVNGRCYHSSCLRCSTCKDELGATCFLREDSM 93
Query: 603 FCEPCF 620
+C F
Sbjct: 94 YCRAHF 99
>Z81054-5|CAE17755.1| 313|Caenorhabditis elegans Hypothetical
protein F01D4.6b protein.
Length = 313
Score = 33.5 bits (73), Expect = 0.17
Identities = 11/46 (23%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 507 EIDKQAFHSHCAKCYFCHTVPSSNIHICYGQVFC-EPCFQHHVLHR 641
++D +++H +C KC C + + G+++C + ++ H +HR
Sbjct: 35 QMDNRSYHENCVKCTICESPLAEKCFWKNGRIYCSQHYYKDHSIHR 80
>M20244-1|AAA28108.1| 313|Caenorhabditis elegans protein (
C.elegans mec-3 geneencoding differentiation of the six
touch receptor neurons,complete cds. ).
Length = 313
Score = 33.5 bits (73), Expect = 0.17
Identities = 11/46 (23%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 507 EIDKQAFHSHCAKCYFCHTVPSSNIHICYGQVFC-EPCFQHHVLHR 641
++D +++H +C KC C + + G+++C + ++ H +HR
Sbjct: 35 QMDNRSYHENCVKCTICESPLAEKCFWKNGRIYCSQHYYKDHSIHR 80
>Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 33.1 bits (72), Expect = 0.22
Identities = 33/126 (26%), Positives = 46/126 (36%), Gaps = 16/126 (12%)
Frame = +3
Query: 279 GHVFCNGCFKQHVLDRFR-------GEC-PSVHTNWAQ--WTCGK----FGNGQEGDNPG 416
G FC CF+QH+ R +C ++ W +TC FGN G
Sbjct: 556 GQKFCESCFEQHIAPRCNKCSKPIISDCLNALQKKWHPTCFTCAHCQKPFGNSAFYLEQG 615
Query: 417 ASSKSEASEGNTKRSVCSRCLQMINENNK-IEIDKQAFHSHCAKCYFC-HTVPSSNIHIC 590
E + C C I ++ +E AFHS+C C C H + +
Sbjct: 616 LPY-CEQDWNALFTTKCVSCRYPIEAGDRWVEALGNAFHSNCFTCARCNHNLEGESFFAK 674
Query: 591 YGQVFC 608
GQ FC
Sbjct: 675 NGQPFC 680
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical protein
T11B7.4d protein.
Length = 1424
Score = 33.1 bits (72), Expect = 0.22
Identities = 33/126 (26%), Positives = 46/126 (36%), Gaps = 16/126 (12%)
Frame = +3
Query: 279 GHVFCNGCFKQHVLDRFR-------GEC-PSVHTNWAQ--WTCGK----FGNGQEGDNPG 416
G FC CF+QH+ R +C ++ W +TC FGN G
Sbjct: 1296 GQKFCESCFEQHIAPRCNKCSKPIISDCLNALQKKWHPTCFTCAHCQKPFGNSAFYLEQG 1355
Query: 417 ASSKSEASEGNTKRSVCSRCLQMINENNK-IEIDKQAFHSHCAKCYFC-HTVPSSNIHIC 590
E + C C I ++ +E AFHS+C C C H + +
Sbjct: 1356 LPY-CEQDWNALFTTKCVSCRYPIEAGDRWVEALGNAFHSNCFTCARCNHNLEGESFFAK 1414
Query: 591 YGQVFC 608
GQ FC
Sbjct: 1415 NGQPFC 1420
>Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical protein
T11B7.4c protein.
Length = 771
Score = 33.1 bits (72), Expect = 0.22
Identities = 33/126 (26%), Positives = 46/126 (36%), Gaps = 16/126 (12%)
Frame = +3
Query: 279 GHVFCNGCFKQHVLDRFR-------GEC-PSVHTNWAQ--WTCGK----FGNGQEGDNPG 416
G FC CF+QH+ R +C ++ W +TC FGN G
Sbjct: 643 GQKFCESCFEQHIAPRCNKCSKPIISDCLNALQKKWHPTCFTCAHCQKPFGNSAFYLEQG 702
Query: 417 ASSKSEASEGNTKRSVCSRCLQMINENNK-IEIDKQAFHSHCAKCYFC-HTVPSSNIHIC 590
E + C C I ++ +E AFHS+C C C H + +
Sbjct: 703 LPY-CEQDWNALFTTKCVSCRYPIEAGDRWVEALGNAFHSNCFTCARCNHNLEGESFFAK 761
Query: 591 YGQVFC 608
GQ FC
Sbjct: 762 NGQPFC 767
>Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 33.1 bits (72), Expect = 0.22
Identities = 33/126 (26%), Positives = 46/126 (36%), Gaps = 16/126 (12%)
Frame = +3
Query: 279 GHVFCNGCFKQHVLDRFR-------GEC-PSVHTNWAQ--WTCGK----FGNGQEGDNPG 416
G FC CF+QH+ R +C ++ W +TC FGN G
Sbjct: 517 GQKFCESCFEQHIAPRCNKCSKPIISDCLNALQKKWHPTCFTCAHCQKPFGNSAFYLEQG 576
Query: 417 ASSKSEASEGNTKRSVCSRCLQMINENNK-IEIDKQAFHSHCAKCYFC-HTVPSSNIHIC 590
E + C C I ++ +E AFHS+C C C H + +
Sbjct: 577 LPY-CEQDWNALFTTKCVSCRYPIEAGDRWVEALGNAFHSNCFTCARCNHNLEGESFFAK 635
Query: 591 YGQVFC 608
GQ FC
Sbjct: 636 NGQPFC 641
>Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 33.1 bits (72), Expect = 0.22
Identities = 33/126 (26%), Positives = 46/126 (36%), Gaps = 16/126 (12%)
Frame = +3
Query: 279 GHVFCNGCFKQHVLDRFR-------GEC-PSVHTNWAQ--WTCGK----FGNGQEGDNPG 416
G FC CF+QH+ R +C ++ W +TC FGN G
Sbjct: 556 GQKFCESCFEQHIAPRCNKCSKPIISDCLNALQKKWHPTCFTCAHCQKPFGNSAFYLEQG 615
Query: 417 ASSKSEASEGNTKRSVCSRCLQMINENNK-IEIDKQAFHSHCAKCYFC-HTVPSSNIHIC 590
E + C C I ++ +E AFHS+C C C H + +
Sbjct: 616 LPY-CEQDWNALFTTKCVSCRYPIEAGDRWVEALGNAFHSNCFTCARCNHNLEGESFFAK 674
Query: 591 YGQVFC 608
GQ FC
Sbjct: 675 NGQPFC 680
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 33.1 bits (72), Expect = 0.22
Identities = 33/126 (26%), Positives = 46/126 (36%), Gaps = 16/126 (12%)
Frame = +3
Query: 279 GHVFCNGCFKQHVLDRFR-------GEC-PSVHTNWAQ--WTCGK----FGNGQEGDNPG 416
G FC CF+QH+ R +C ++ W +TC FGN G
Sbjct: 1296 GQKFCESCFEQHIAPRCNKCSKPIISDCLNALQKKWHPTCFTCAHCQKPFGNSAFYLEQG 1355
Query: 417 ASSKSEASEGNTKRSVCSRCLQMINENNK-IEIDKQAFHSHCAKCYFC-HTVPSSNIHIC 590
E + C C I ++ +E AFHS+C C C H + +
Sbjct: 1356 LPY-CEQDWNALFTTKCVSCRYPIEAGDRWVEALGNAFHSNCFTCARCNHNLEGESFFAK 1414
Query: 591 YGQVFC 608
GQ FC
Sbjct: 1415 NGQPFC 1420
>Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 33.1 bits (72), Expect = 0.22
Identities = 33/126 (26%), Positives = 46/126 (36%), Gaps = 16/126 (12%)
Frame = +3
Query: 279 GHVFCNGCFKQHVLDRFR-------GEC-PSVHTNWAQ--WTCGK----FGNGQEGDNPG 416
G FC CF+QH+ R +C ++ W +TC FGN G
Sbjct: 643 GQKFCESCFEQHIAPRCNKCSKPIISDCLNALQKKWHPTCFTCAHCQKPFGNSAFYLEQG 702
Query: 417 ASSKSEASEGNTKRSVCSRCLQMINENNK-IEIDKQAFHSHCAKCYFC-HTVPSSNIHIC 590
E + C C I ++ +E AFHS+C C C H + +
Sbjct: 703 LPY-CEQDWNALFTTKCVSCRYPIEAGDRWVEALGNAFHSNCFTCARCNHNLEGESFFAK 761
Query: 591 YGQVFC 608
GQ FC
Sbjct: 762 NGQPFC 767
>Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 33.1 bits (72), Expect = 0.22
Identities = 33/126 (26%), Positives = 46/126 (36%), Gaps = 16/126 (12%)
Frame = +3
Query: 279 GHVFCNGCFKQHVLDRFR-------GEC-PSVHTNWAQ--WTCGK----FGNGQEGDNPG 416
G FC CF+QH+ R +C ++ W +TC FGN G
Sbjct: 517 GQKFCESCFEQHIAPRCNKCSKPIISDCLNALQKKWHPTCFTCAHCQKPFGNSAFYLEQG 576
Query: 417 ASSKSEASEGNTKRSVCSRCLQMINENNK-IEIDKQAFHSHCAKCYFC-HTVPSSNIHIC 590
E + C C I ++ +E AFHS+C C C H + +
Sbjct: 577 LPY-CEQDWNALFTTKCVSCRYPIEAGDRWVEALGNAFHSNCFTCARCNHNLEGESFFAK 635
Query: 591 YGQVFC 608
GQ FC
Sbjct: 636 NGQPFC 641
>U55375-4|AAC69042.3| 287|Caenorhabditis elegans Lim domain family
protein 6 protein.
Length = 287
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +3
Query: 429 SEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICY---GQ 599
S + T+ +CS C +I + + + ++H C +C C + S+ C+ G
Sbjct: 7 SATTSSTTEDKLCSGCGCLIKDRYIYRVMEDSYHESCLRCSCCQ-LSLSSFKKCFSRHGN 65
Query: 600 VFCEPCFQHHVLH 638
++CE H +L+
Sbjct: 66 IYCE--HDHQMLY 76
>U20861-6|AAA62294.1| 256|Caenorhabditis elegans Temporarily
assigned gene nameprotein 327, isoform a protein.
Length = 256
Score = 32.7 bits (71), Expect = 0.29
Identities = 27/118 (22%), Positives = 45/118 (38%), Gaps = 6/118 (5%)
Frame = +3
Query: 291 CNGCFKQHVLDRFRGECPSVHTNWAQ-----WTCGKFGNGQEGDNPGASSKSEASEGNTK 455
CNGC Q + F ++ T+W CG NG + E ++
Sbjct: 137 CNGC-SQPITSNF---ITALGTHWHPDCFVCQHCGVSFNGASFFEHNGAPLCERHYHESR 192
Query: 456 RSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFC-HTVPSSNIHICYGQVFCEPCFQH 626
S+CS+C IN + ++ FH +C +C H + + FC C+ +
Sbjct: 193 GSICSQCRGAINGRCVAAMGRK-FHPEHFRCSYCNHQLTKGTFKEVDRRPFCHKCYNN 249
>Z47811-3|CAA87787.2| 723|Caenorhabditis elegans Hypothetical
protein K02C4.4 protein.
Length = 723
Score = 31.5 bits (68), Expect = 0.67
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +3
Query: 447 NTKRSVCSRCLQMINENNKIEI--DKQAFHSHCAKCYFCHT 563
N+K+ C+RC + + +K+ D FH C KCY C T
Sbjct: 2 NSKQH-CNRCGKQVYPTDKVGPLKDSTFFHQGCFKCYICGT 41
>AF489839-1|AAN09795.1| 723|Caenorhabditis elegans lim and
transglutaminase domainprotein protein.
Length = 723
Score = 31.5 bits (68), Expect = 0.67
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +3
Query: 447 NTKRSVCSRCLQMINENNKIEI--DKQAFHSHCAKCYFCHT 563
N+K+ C+RC + + +K+ D FH C KCY C T
Sbjct: 2 NSKQH-CNRCGKQVYPTDKVGPLKDSTFFHQGCFKCYICGT 41
>AY349017-1|AAQ55497.1| 474|Caenorhabditis elegans NHR-91A protein.
Length = 474
Score = 31.1 bits (67), Expect = 0.89
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +3
Query: 375 CGKFGNGQEGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYF 554
C G+ G + GA++ E +G KRSV ++ + +++N EIDKQ + C C F
Sbjct: 100 CSVCGDKSTGLHYGAAT-CEGCKGFFKRSVQNKKVYHCSQDNCCEIDKQN-RNRCQSCRF 157
>AL132841-4|CAB60329.2| 474|Caenorhabditis elegans Hypothetical
protein Y15E3A.1a protein.
Length = 474
Score = 31.1 bits (67), Expect = 0.89
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +3
Query: 375 CGKFGNGQEGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYF 554
C G+ G + GA++ E +G KRSV ++ + +++N EIDKQ + C C F
Sbjct: 100 CSVCGDKSTGLHYGAAT-CEGCKGFFKRSVQNKKVYHCSQDNCCEIDKQN-RNRCQSCRF 157
>AF273835-1|AAG15183.1| 476|Caenorhabditis elegans nuclear receptor
NHR-91 protein.
Length = 476
Score = 31.1 bits (67), Expect = 0.89
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +3
Query: 375 CGKFGNGQEGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYF 554
C G+ G + GA++ E +G KRSV ++ + +++N EIDKQ + C C F
Sbjct: 102 CSVCGDKSTGLHYGAAT-CEGCKGFFKRSVQNKKVYHCSQDNCCEIDKQN-RNRCQSCRF 159
>AF273834-1|AAG15182.1| 475|Caenorhabditis elegans nuclear receptor
NHR-91 protein.
Length = 475
Score = 31.1 bits (67), Expect = 0.89
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +3
Query: 375 CGKFGNGQEGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYF 554
C G+ G + GA++ E +G KRSV ++ + +++N EIDKQ + C C F
Sbjct: 101 CSVCGDKSTGLHYGAAT-CEGCKGFFKRSVQNKKVYHCSQDNCCEIDKQN-RNRCQSCRF 158
>AF273833-1|AAG15181.1| 475|Caenorhabditis elegans nuclear receptor
NHR-91 protein.
Length = 475
Score = 31.1 bits (67), Expect = 0.89
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +3
Query: 375 CGKFGNGQEGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYF 554
C G+ G + GA++ E +G KRSV ++ + +++N EIDKQ + C C F
Sbjct: 101 CSVCGDKSTGLHYGAAT-CEGCKGFFKRSVQNKKVYHCSQDNCCEIDKQN-RNRCQSCRF 158
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical protein
T10G3.5b protein.
Length = 1203
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/107 (23%), Positives = 40/107 (37%), Gaps = 14/107 (13%)
Frame = +3
Query: 402 GDNPGASSKSEASEGNTKR--SVCSRCLQMINENNKIEIDKQAFHS----------HCAK 545
G + E S+ N +R S ++ N ++ID + S +C +
Sbjct: 1093 GSESDIEYEKERSQENKRRFDDALSAMHELGRANQSLQIDADRYSSRKWLDDAEAINCTE 1152
Query: 546 C--YFCHTVPSSNIHICYGQVFCEPCFQHHVLHRHKDNPNEFFKQCF 680
C F TV + +C G+++C PC V NP CF
Sbjct: 1153 CGKVFSLTVRKHHCRVC-GKIYCNPCSSKSVRIASAKNPVRACNTCF 1198
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical protein
T10G3.5a protein.
Length = 1205
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/107 (23%), Positives = 40/107 (37%), Gaps = 14/107 (13%)
Frame = +3
Query: 402 GDNPGASSKSEASEGNTKR--SVCSRCLQMINENNKIEIDKQAFHS----------HCAK 545
G + E S+ N +R S ++ N ++ID + S +C +
Sbjct: 1095 GSESDIEYEKERSQENKRRFDDALSAMHELGRANQSLQIDADRYSSRKWLDDAEAINCTE 1154
Query: 546 C--YFCHTVPSSNIHICYGQVFCEPCFQHHVLHRHKDNPNEFFKQCF 680
C F TV + +C G+++C PC V NP CF
Sbjct: 1155 CGKVFSLTVRKHHCRVC-GKIYCNPCSSKSVRIASAKNPVRACNTCF 1200
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/107 (23%), Positives = 40/107 (37%), Gaps = 14/107 (13%)
Frame = +3
Query: 402 GDNPGASSKSEASEGNTKR--SVCSRCLQMINENNKIEIDKQAFHS----------HCAK 545
G + E S+ N +R S ++ N ++ID + S +C +
Sbjct: 1095 GSESDIEYEKERSQENKRRFDDALSAMHELGRANQSLQIDADRYSSRKWLDDAEAINCTE 1154
Query: 546 C--YFCHTVPSSNIHICYGQVFCEPCFQHHVLHRHKDNPNEFFKQCF 680
C F TV + +C G+++C PC V NP CF
Sbjct: 1155 CGKVFSLTVRKHHCRVC-GKIYCNPCSSKSVRIASAKNPVRACNTCF 1200
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 487 STRITKLKLTSRPSIVTVPSAIFATRFHRPTSTS-AMVKSSASLASNITSCTDIRTTPM 660
++ IT ++ PS TVPS +T +P+S S A ++ L SN+TS T+P+
Sbjct: 283 TSTITSTGSSNPPSTSTVPSTTTSTTTPKPSSPSTAEASTTPVLTSNLTSAL-TSTSPL 340
>Z71261-2|CAA95805.1| 813|Caenorhabditis elegans Hypothetical
protein F21C3.2 protein.
Length = 813
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -3
Query: 594 HSRCGCWTME-PCGKNSTWHSDYGRPACQ 511
H+ C W+ C KN W S+ R +CQ
Sbjct: 640 HTNCAMWSRSGECNKNPLWMSENCRSSCQ 668
>U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily assigned
gene nameprotein 204, isoform b protein.
Length = 868
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/77 (18%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Frame = +3
Query: 417 ASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQA--FHSHCAKCYFCHT-----VPSS 575
+S K ++ + + C+ C + + + ++ +H C KCY C T +
Sbjct: 784 SSQKDDSVVAVSGKHRCAHCNEELGRGAAMIVESLNLFYHLACFKCYVCKTSLGSGATGA 843
Query: 576 NIHICYGQVFCEPCFQH 626
++ + G++ C+ C+ +
Sbjct: 844 DVRVRDGRLHCQTCYSN 860
>U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily assigned
gene nameprotein 204, isoform a protein.
Length = 1004
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/77 (18%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Frame = +3
Query: 417 ASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQA--FHSHCAKCYFCHT-----VPSS 575
+S K ++ + + C+ C + + + ++ +H C KCY C T +
Sbjct: 920 SSQKDDSVVAVSGKHRCAHCNEELGRGAAMIVESLNLFYHLACFKCYVCKTSLGSGATGA 979
Query: 576 NIHICYGQVFCEPCFQH 626
++ + G++ C+ C+ +
Sbjct: 980 DVRVRDGRLHCQTCYSN 996
>U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily assigned
gene nameprotein 204, isoform c protein.
Length = 1099
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/77 (18%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Frame = +3
Query: 417 ASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQA--FHSHCAKCYFCHT-----VPSS 575
+S K ++ + + C+ C + + + ++ +H C KCY C T +
Sbjct: 1015 SSQKDDSVVAVSGKHRCAHCNEELGRGAAMIVESLNLFYHLACFKCYVCKTSLGSGATGA 1074
Query: 576 NIHICYGQVFCEPCFQH 626
++ + G++ C+ C+ +
Sbjct: 1075 DVRVRDGRLHCQTCYSN 1091
>AF039053-17|AAC25882.2| 279|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 16 protein.
Length = 279
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 23 NEIFFHFQTLLFSLLFKFYF 82
N I FHF +LF+ LFK +F
Sbjct: 218 NVIIFHFSPILFAFLFKHWF 237
>AF016683-8|AAM97998.1| 480|Caenorhabditis elegans Hypothetical
protein K09F6.10 protein.
Length = 480
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = +3
Query: 528 HSHCAKCYFCHTVPS--SNIHICYGQVFCEPCFQ 623
+ C KC F H S +H C+ FC+ C Q
Sbjct: 400 YEKCKKCGFIHRKDSYSKTVHKCHDNAFCKICRQ 433
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
Frame = -2
Query: 685 CSKHCL----KNSLGLSLCRCK 632
C KHCL NS G SLC+C+
Sbjct: 463 CHKHCLYGFETNSAGCSLCKCR 484
>Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
Frame = -2
Query: 685 CSKHCL----KNSLGLSLCRCK 632
C KHCL NS G SLC+C+
Sbjct: 397 CHKHCLYGFETNSAGCSLCKCR 418
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
Frame = -2
Query: 685 CSKHCL----KNSLGLSLCRCK 632
C KHCL NS G SLC+C+
Sbjct: 397 CHKHCLYGFETNSAGCSLCKCR 418
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
Frame = -2
Query: 685 CSKHCL----KNSLGLSLCRCK 632
C KHCL NS G SLC+C+
Sbjct: 463 CHKHCLYGFETNSAGCSLCKCR 484
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
Frame = -2
Query: 685 CSKHCL----KNSLGLSLCRCK 632
C KHCL NS G SLC+C+
Sbjct: 397 CHKHCLYGFETNSAGCSLCKCR 418
>AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
Frame = -2
Query: 685 CSKHCL----KNSLGLSLCRCK 632
C KHCL NS G SLC+C+
Sbjct: 397 CHKHCLYGFETNSAGCSLCKCR 418
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
Frame = -2
Query: 685 CSKHCL----KNSLGLSLCRCK 632
C KHCL NS G SLC+C+
Sbjct: 397 CHKHCLYGFETNSAGCSLCKCR 418
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
Frame = -2
Query: 685 CSKHCL----KNSLGLSLCRCK 632
C KHCL NS G SLC+C+
Sbjct: 397 CHKHCLYGFETNSAGCSLCKCR 418
>Z72504-6|CAA96604.2| 906|Caenorhabditis elegans Hypothetical
protein C29E6.4 protein.
Length = 906
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 526 SIVTVPSAIFATRFHRPTSTSAMVKSSASLASNIT 630
S VP++I +T RPT+ S VKSS + S T
Sbjct: 453 STTHVPTSIRSTSSARPTTYSTTVKSSTTTVSTST 487
>Z66499-2|CAA91297.1| 183|Caenorhabditis elegans Hypothetical
protein T01B7.4 protein.
Length = 183
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/52 (42%), Positives = 24/52 (46%), Gaps = 15/52 (28%)
Frame = +3
Query: 639 RHKDNPNEFFKQC----------FEQFAD--PRFAENMKQFMAG---KDGAP 749
RH DNP F + E FAD PR AEN +QF G KDG P
Sbjct: 12 RHPDNPIVFLEVTAGGAPIGTIVIELFADVTPRTAENFRQFCTGEYKKDGVP 63
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = -1
Query: 710 LGKSGVRELLEALLEEFIGVVLMSVQDVMLEARLAEDLTIADVDVGRWNRVAKIALGTVT 531
+G +L + +E + ++ S ++ LE +L+ED + +V + + A + +
Sbjct: 801 VGMFSAPKLKRLMEDESLRELVCSKLNLGLEVKLSEDEYVKEVQLTKGQFKAYVKILKAC 860
Query: 530 MEGLLVNFN 504
+EG+ V+FN
Sbjct: 861 LEGIEVSFN 869
>U73946-1|AAB18328.1| 452|Caenorhabditis elegans CeLIM-7 protein.
Length = 452
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Frame = +3
Query: 423 SKSEASEGNTKRSVCSRCLQMINENNKIEIDKQA-FHSHCAKCYFCHTVPSSN--IHICY 593
S E + +VC+ C I++ + ++ FH+ C KC C N +
Sbjct: 42 SPVEQRQHQPPMAVCAGCRLEISDRYFLRVNPNLEFHAQCLKCVQCSRPLDENQTAFVKN 101
Query: 594 GQVFC 608
GQ +C
Sbjct: 102 GQTYC 106
>U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of
fusion protein 2,isoform a protein.
Length = 302
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +3
Query: 621 QH-HVLHRHKDNPNEFFKQCFEQFADPRF 704
QH H +H D PN F + QF++P +
Sbjct: 264 QHLHTMHTFMDRPNPFMQMYQNQFSNPTY 292
>U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of
fusion protein 2,isoform b protein.
Length = 315
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +3
Query: 621 QH-HVLHRHKDNPNEFFKQCFEQFADPRF 704
QH H +H D PN F + QF++P +
Sbjct: 277 QHLHTMHTFMDRPNPFMQMYQNQFSNPTY 305
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = -1
Query: 710 LGKSGVRELLEALLEEFIGVVLMSVQDVMLEARLAEDLTIADVDVGRWNRVAKIALGTVT 531
+G +L + +E + ++ S ++ LE +L+ED + +V + + A + +
Sbjct: 801 VGMFSAPKLKRLMEDESLRELVCSKLNLGLEVKLSEDEYVKEVQLTKGQFKAYVKILKAC 860
Query: 530 MEGLLVNFN 504
+EG+ V+FN
Sbjct: 861 LEGIEVSFN 869
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = -1
Query: 710 LGKSGVRELLEALLEEFIGVVLMSVQDVMLEARLAEDLTIADVDVGRWNRVAKIALGTVT 531
+G +L + +E + ++ S ++ LE +L+ED + +V + + A + +
Sbjct: 801 VGMFSAPKLKRLMEDESLRELVCSKLNLGLEVKLSEDEYVKEVQLTKGQFKAYVKILKAC 860
Query: 530 MEGLLVNFN 504
+EG+ V+FN
Sbjct: 861 LEGIEVSFN 869
>U34955-1|AAC47115.1| 183|Caenorhabditis elegans cyclophilin
isoform 11 (CYP-11) protein.
Length = 183
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/52 (42%), Positives = 24/52 (46%), Gaps = 15/52 (28%)
Frame = +3
Query: 639 RHKDNPNEFFKQC----------FEQFAD--PRFAENMKQFMAG---KDGAP 749
RH DNP F + E FAD PR AEN +QF G KDG P
Sbjct: 12 RHPDNPIVFLEVTAGGAPIGTIVIELFADVTPRTAENFRQFCTGEYKKDGVP 63
>AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger
protein REF-2 protein.
Length = 303
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +3
Query: 621 QH-HVLHRHKDNPNEFFKQCFEQFADPRF 704
QH H +H D PN F + QF++P +
Sbjct: 265 QHLHTMHTFMDRPNPFMQMYQNQFSNPTY 293
>AL132952-10|CAB63384.1| 591|Caenorhabditis elegans Hypothetical
protein Y51H4A.13 protein.
Length = 591
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +3
Query: 561 TVPSS-NIHI--CYGQVFCEPCFQH-HVLHRHKDNPNEFFKQCFEQFADPR 701
TVPS+ NIH C GQ +P H H H H NP++ Q +++ PR
Sbjct: 274 TVPSNTNIHNDHCSGQAPPDPYQPHGHPAH-HIPNPHQLHHQHRRRYSSPR 323
>AF067210-1|AAC16985.1| 452|Caenorhabditis elegans Lim domain
family protein 7 protein.
Length = 452
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Frame = +3
Query: 423 SKSEASEGNTKRSVCSRCLQMINENNKIEIDKQA-FHSHCAKCYFCHTVPSSN--IHICY 593
S E + +VC+ C I++ + ++ FH+ C KC C N +
Sbjct: 42 SPVEQRQHQPPMAVCAGCRLEISDRYFLRVNPNLEFHAQCLKCVQCSRPLDENQTAFVKN 101
Query: 594 GQVFC 608
GQ +C
Sbjct: 102 GQTYC 106
>AC103567-8|AAL35729.1| 305|Caenorhabditis elegans Hypothetical
protein Y51F10.2 protein.
Length = 305
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
Frame = +3
Query: 459 SVCSRCLQMINENNKIE-----IDKQAFHSHCAKCYFCHTVPSSNIHICY 593
+VC RC+ +++E ++I ID+ H C C P + I Y
Sbjct: 41 TVCERCIGLLDEQSRINHNRPPIDRSFVHIRCPVCRAVTQTPRNYIRSNY 90
>AC006617-5|AAF39775.1| 325|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 65 protein.
Length = 325
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +3
Query: 273 FYGHVFCNGCFKQHVLDRFRGECPSVHTNWAQWTCGKFGNGQE 401
F G FC C+K + ++HT + + C K N QE
Sbjct: 83 FLGPTFCATCYKAYATSVLTVNLINLHTLYYRTVCLKLINAQE 125
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,315,638
Number of Sequences: 27780
Number of extensions: 403672
Number of successful extensions: 1312
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1312
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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