Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22h15
(778 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF057987-1|ABL84922.1| 845|Drosophila melanogaster Nup107 protein. 32 1.0
EF057986-1|ABL84921.1| 845|Drosophila melanogaster Nup107 protein. 32 1.0
EF057985-1|ABL84920.1| 845|Drosophila melanogaster Nup107 protein. 32 1.0
EF057984-1|ABL84919.1| 845|Drosophila melanogaster Nup107 protein. 32 1.0
EF057983-1|ABL84918.1| 845|Drosophila melanogaster Nup107 protein. 32 1.0
EF057982-1|ABL84917.1| 845|Drosophila melanogaster Nup107 protein. 32 1.0
EF057981-1|ABL84916.1| 845|Drosophila melanogaster Nup107 protein. 32 1.0
EF057980-1|ABL84915.1| 845|Drosophila melanogaster Nup107 protein. 32 1.0
EF057977-1|ABL84912.1| 845|Drosophila melanogaster Nup107 protein. 32 1.0
BT003623-1|AAO39626.1| 1104|Drosophila melanogaster GH02446p pro... 32 1.0
AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE... 32 1.0
EF057988-1|ABL84923.1| 845|Drosophila melanogaster Nup107 protein. 31 1.3
EF057979-1|ABL84914.1| 846|Drosophila melanogaster Nup107 protein. 31 1.8
BT016051-1|AAV36936.1| 1132|Drosophila melanogaster LP17541p pro... 30 4.1
AE014298-797|AAF46083.2| 1132|Drosophila melanogaster CG3108-PA ... 30 4.1
EF057978-1|ABL84913.1| 845|Drosophila melanogaster Nup107 protein. 29 5.4
AF160938-1|AAD46878.1| 845|Drosophila melanogaster BcDNA.LD1876... 29 5.4
AE014134-1943|AAF53002.1| 845|Drosophila melanogaster CG6743-PA... 29 5.4
AJ291604-1|CAC20096.1| 1092|Drosophila melanogaster gamma-tubuli... 29 7.1
AE014298-2157|AAF48460.2| 1092|Drosophila melanogaster CG9201-PB... 29 7.1
>EF057987-1|ABL84922.1| 845|Drosophila melanogaster Nup107 protein.
Length = 845
Score = 31.9 bits (69), Expect = 1.0
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = +3
Query: 207 PHPYKSRSGKTNNTINDNKVDQNIK-KLLVLSEPAADPNIVEKIIQRAKKQKPLLENT-- 377
P P SRSG T+N + QN+ LL+L + A+ N ++ L+E+T
Sbjct: 5 PFPRSSRSGLLRTTLNSSMAPQNLSHSLLILEKSNAEQN-----------ERSLMEDTGD 53
Query: 378 EVKKGKEK-SILFPE 419
++ +GK + +LFP+
Sbjct: 54 DLDRGKSRMDVLFPQ 68
>EF057986-1|ABL84921.1| 845|Drosophila melanogaster Nup107 protein.
Length = 845
Score = 31.9 bits (69), Expect = 1.0
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = +3
Query: 207 PHPYKSRSGKTNNTINDNKVDQNIK-KLLVLSEPAADPNIVEKIIQRAKKQKPLLENT-- 377
P P SRSG T+N + QN+ LL+L + A+ N ++ L+E+T
Sbjct: 5 PFPRSSRSGLLRTTLNSSMAPQNLSHSLLILEKSNAEQN-----------ERSLMEDTGD 53
Query: 378 EVKKGKEK-SILFPE 419
++ +GK + +LFP+
Sbjct: 54 DLDRGKSRMDVLFPQ 68
>EF057985-1|ABL84920.1| 845|Drosophila melanogaster Nup107 protein.
Length = 845
Score = 31.9 bits (69), Expect = 1.0
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = +3
Query: 207 PHPYKSRSGKTNNTINDNKVDQNIK-KLLVLSEPAADPNIVEKIIQRAKKQKPLLENT-- 377
P P SRSG T+N + QN+ LL+L + A+ N ++ L+E+T
Sbjct: 5 PFPRSSRSGLLRTTLNSSMAPQNLSHSLLILEKSNAEQN-----------ERSLMEDTGD 53
Query: 378 EVKKGKEK-SILFPE 419
++ +GK + +LFP+
Sbjct: 54 DLDRGKSRMDVLFPQ 68
>EF057984-1|ABL84919.1| 845|Drosophila melanogaster Nup107 protein.
Length = 845
Score = 31.9 bits (69), Expect = 1.0
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = +3
Query: 207 PHPYKSRSGKTNNTINDNKVDQNIK-KLLVLSEPAADPNIVEKIIQRAKKQKPLLENT-- 377
P P SRSG T+N + QN+ LL+L + A+ N ++ L+E+T
Sbjct: 5 PFPRSSRSGLLRTTLNSSMAPQNLSHSLLILEKSNAEQN-----------ERSLMEDTGD 53
Query: 378 EVKKGKEK-SILFPE 419
++ +GK + +LFP+
Sbjct: 54 DLDRGKSRMDVLFPQ 68
>EF057983-1|ABL84918.1| 845|Drosophila melanogaster Nup107 protein.
Length = 845
Score = 31.9 bits (69), Expect = 1.0
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = +3
Query: 207 PHPYKSRSGKTNNTINDNKVDQNIK-KLLVLSEPAADPNIVEKIIQRAKKQKPLLENT-- 377
P P SRSG T+N + QN+ LL+L + A+ N ++ L+E+T
Sbjct: 5 PFPRSSRSGLLRTTLNSSMAPQNLSHSLLILEKSNAEQN-----------ERSLMEDTGD 53
Query: 378 EVKKGKEK-SILFPE 419
++ +GK + +LFP+
Sbjct: 54 DLDRGKSRMDVLFPQ 68
>EF057982-1|ABL84917.1| 845|Drosophila melanogaster Nup107 protein.
Length = 845
Score = 31.9 bits (69), Expect = 1.0
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = +3
Query: 207 PHPYKSRSGKTNNTINDNKVDQNIK-KLLVLSEPAADPNIVEKIIQRAKKQKPLLENT-- 377
P P SRSG T+N + QN+ LL+L + A+ N ++ L+E+T
Sbjct: 5 PFPRSSRSGLLRTTLNSSMAPQNLSHSLLILEKSNAEQN-----------ERSLMEDTGD 53
Query: 378 EVKKGKEK-SILFPE 419
++ +GK + +LFP+
Sbjct: 54 DLDRGKSRMDVLFPQ 68
>EF057981-1|ABL84916.1| 845|Drosophila melanogaster Nup107 protein.
Length = 845
Score = 31.9 bits (69), Expect = 1.0
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = +3
Query: 207 PHPYKSRSGKTNNTINDNKVDQNIK-KLLVLSEPAADPNIVEKIIQRAKKQKPLLENT-- 377
P P SRSG T+N + QN+ LL+L + A+ N ++ L+E+T
Sbjct: 5 PFPRSSRSGLLRTTLNSSMAPQNLSHSLLILEKSNAEQN-----------ERSLMEDTGD 53
Query: 378 EVKKGKEK-SILFPE 419
++ +GK + +LFP+
Sbjct: 54 DLDRGKSRMDVLFPQ 68
>EF057980-1|ABL84915.1| 845|Drosophila melanogaster Nup107 protein.
Length = 845
Score = 31.9 bits (69), Expect = 1.0
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = +3
Query: 207 PHPYKSRSGKTNNTINDNKVDQNIK-KLLVLSEPAADPNIVEKIIQRAKKQKPLLENT-- 377
P P SRSG T+N + QN+ LL+L + A+ N ++ L+E+T
Sbjct: 5 PFPRSSRSGLLRTTLNSSMAPQNLSHSLLILEKSNAEQN-----------ERSLMEDTGD 53
Query: 378 EVKKGKEK-SILFPE 419
++ +GK + +LFP+
Sbjct: 54 DLDRGKSRMDVLFPQ 68
>EF057977-1|ABL84912.1| 845|Drosophila melanogaster Nup107 protein.
Length = 845
Score = 31.9 bits (69), Expect = 1.0
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = +3
Query: 207 PHPYKSRSGKTNNTINDNKVDQNIK-KLLVLSEPAADPNIVEKIIQRAKKQKPLLENT-- 377
P P SRSG T+N + QN+ LL+L + A+ N ++ L+E+T
Sbjct: 5 PFPRSSRSGLLRTTLNSSMAPQNLSHSLLILEKSNAEQN-----------ERSLMEDTGD 53
Query: 378 EVKKGKEK-SILFPE 419
++ +GK + +LFP+
Sbjct: 54 DLDRGKSRMDVLFPQ 68
>BT003623-1|AAO39626.1| 1104|Drosophila melanogaster GH02446p protein.
Length = 1104
Score = 31.9 bits (69), Expect = 1.0
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +3
Query: 267 DQNIKKLLVLSEPAADPNIVEKIIQRAKKQKPLLENTEVKKGKEKSILFPEEKQSFQDFE 446
+ N+ K+ + EPA P + K +AKK+KPL + K K + P E++S +D
Sbjct: 846 ESNLGKVPTVKEPAKLPEPLIKT--KAKKEKPLKKEKGAKLLTPKDEVLPIERESAKDET 903
Query: 447 K 449
K
Sbjct: 904 K 904
>AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE,
isoform E protein.
Length = 9606
Score = 31.9 bits (69), Expect = 1.0
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +3
Query: 267 DQNIKKLLVLSEPAADPNIVEKIIQRAKKQKPLLENTEVKKGKEKSILFPEEKQSFQDFE 446
+ N+ K+ + EPA P + K +AKK+KPL + K K + P E++S +D
Sbjct: 5088 ESNLGKVPTVKEPAKLPEPLIKT--KAKKEKPLKKEKGAKLLTPKDEVLPIERESAKDET 5145
Query: 447 K 449
K
Sbjct: 5146 K 5146
>EF057988-1|ABL84923.1| 845|Drosophila melanogaster Nup107 protein.
Length = 845
Score = 31.5 bits (68), Expect = 1.3
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +3
Query: 207 PHPYKSRSGKTNNTINDNKVDQNIK-KLLVLSEPAADPNIVEKIIQRAKKQKPLLENT-- 377
P P SRSG T+N + QN+ LL+L + A+ N + L+E+T
Sbjct: 5 PFPRSSRSGLLRTTLNSSMAPQNLSHSLLILEQSNAEQN-----------DRSLMEDTGD 53
Query: 378 EVKKGKEK-SILFPE 419
++ +GK + +LFP+
Sbjct: 54 DLDRGKSRMDVLFPQ 68
>EF057979-1|ABL84914.1| 846|Drosophila melanogaster Nup107 protein.
Length = 846
Score = 31.1 bits (67), Expect = 1.8
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +3
Query: 207 PHPYKSRSGKTNNTINDNKVDQNIK-KLLVLSEPAADPNIVEKIIQRAKKQKPLLENT-- 377
P P SRSG T+N + QN+ LL+L + A+ N ++ L+E+T
Sbjct: 5 PFPRSSRSGLLRTTLNSSMAPQNLSHSLLILEKSNAEQN-----------ERSLMEDTGD 53
Query: 378 EVKKGKEK-SILFPE 419
+ +GK + +LFP+
Sbjct: 54 NLDRGKSRMDVLFPQ 68
>BT016051-1|AAV36936.1| 1132|Drosophila melanogaster LP17541p
protein.
Length = 1132
Score = 29.9 bits (64), Expect = 4.1
Identities = 18/78 (23%), Positives = 42/78 (53%)
Frame = +3
Query: 219 KSRSGKTNNTINDNKVDQNIKKLLVLSEPAADPNIVEKIIQRAKKQKPLLENTEVKKGKE 398
+S+ ++T ND + ++I++ +VL +PA+ +E+ + A + P+ N E+ + +E
Sbjct: 143 ESQPETEHDTENDQQQPESIEEHVVLMKPASQEAQLEQTVDLATEAAPVPLNDELPEDEE 202
Query: 399 KSILFPEEKQSFQDFEKE 452
+ + ++ EKE
Sbjct: 203 SP---AATESAVEELEKE 217
>AE014298-797|AAF46083.2| 1132|Drosophila melanogaster CG3108-PA
protein.
Length = 1132
Score = 29.9 bits (64), Expect = 4.1
Identities = 18/78 (23%), Positives = 42/78 (53%)
Frame = +3
Query: 219 KSRSGKTNNTINDNKVDQNIKKLLVLSEPAADPNIVEKIIQRAKKQKPLLENTEVKKGKE 398
+S+ ++T ND + ++I++ +VL +PA+ +E+ + A + P+ N E+ + +E
Sbjct: 143 ESQPETEHDTENDQQQPESIEEHVVLMKPASQEAQLEQTVDLATEAAPVPLNDELPEDEE 202
Query: 399 KSILFPEEKQSFQDFEKE 452
+ + ++ EKE
Sbjct: 203 SP---AATESAVEELEKE 217
>EF057978-1|ABL84913.1| 845|Drosophila melanogaster Nup107 protein.
Length = 845
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 207 PHPYKSRSGKTNNTINDNKVDQNIK-KLLVLSEPAADPN 320
P P SRSG T+N + QN+ LL+L + A+ N
Sbjct: 5 PFPRSSRSGLLRTTLNSSMPPQNLSHSLLILEKSNAEQN 43
>AF160938-1|AAD46878.1| 845|Drosophila melanogaster BcDNA.LD18761
protein.
Length = 845
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 207 PHPYKSRSGKTNNTINDNKVDQNIK-KLLVLSEPAADPN 320
P P SRSG T+N + QN+ LL+L + A+ N
Sbjct: 5 PFPRSSRSGLLRTTLNSSMPPQNLSHSLLILEKSNAEQN 43
>AE014134-1943|AAF53002.1| 845|Drosophila melanogaster CG6743-PA
protein.
Length = 845
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 207 PHPYKSRSGKTNNTINDNKVDQNIK-KLLVLSEPAADPN 320
P P SRSG T+N + QN+ LL+L + A+ N
Sbjct: 5 PFPRSSRSGLLRTTLNSSMPPQNLSHSLLILEKSNAEQN 43
>AJ291604-1|CAC20096.1| 1092|Drosophila melanogaster gamma-tubulin
ring protein protein.
Length = 1092
Score = 29.1 bits (62), Expect = 7.1
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 219 KSRSGKTNNTINDNKVDQNIKKLL-VLSEPAADPNIVEKIIQRAKK 353
+ RSGKT+ +N + +++N++KL+ LSEP + ++ A K
Sbjct: 11 RKRSGKTSTAVN-SAINENVRKLVRSLSEPGTSQKKLRQMEDTALK 55
>AE014298-2157|AAF48460.2| 1092|Drosophila melanogaster CG9201-PB,
isoform B protein.
Length = 1092
Score = 29.1 bits (62), Expect = 7.1
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 219 KSRSGKTNNTINDNKVDQNIKKLL-VLSEPAADPNIVEKIIQRAKK 353
+ RSGKT+ +N + +++N++KL+ LSEP + ++ A K
Sbjct: 11 RKRSGKTSTAVN-SAINENVRKLVRSLSEPGTSQKKLRQMEDTALK 55
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,557,102
Number of Sequences: 53049
Number of extensions: 631903
Number of successful extensions: 1540
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1539
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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