Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22h14
         (727 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    27   0.18 
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    25   0.73 
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    25   0.96 
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     23   2.9  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    21   9.0  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   9.0  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   9.0  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    21   9.0  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    21   9.0  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +1

Query: 520 VFSLGVVPWTAEVLALAT-CSRYFLHYPWVWGILLGSIYASLSCAVVMPSVLKV 678
           +FSL +      VL L    S ++  YPWV G+ L  I A +S      SVL +
Sbjct: 79  LFSLAISDLILLVLGLPNELSLFWQQYPWVLGVSLCKIRAYVSEMSSYVSVLTI 132


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 25.0 bits (52), Expect = 0.73
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +1

Query: 520 VFSLGVVPWTAEVLALA-TCSRYFLHYPWVWGILLGSIYASLSCAVVMPSVLKV 678
           +F+L V      +L L    S ++  YPW WG+ +  + A +S      SVL +
Sbjct: 72  LFNLAVSDLLFLILGLPFELSVFWQQYPWQWGLGICKLRAYVSETSSYVSVLTI 125


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 255 VELEWKMVQTSSRCGYRMEQRTTPTETHY 341
           +E  W  V TS + G  +EQ    + +HY
Sbjct: 434 LEKNWLPVHTSYKSGLNLEQEKKDSISHY 462


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 538 VPWTAEVLALATCSRYFLHYPWVWGIL 618
           +PW   V ALA  +     +PW+  I+
Sbjct: 335 IPWDKNVEALAKWANGQTGFPWIDAIM 361


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +1

Query: 637 SLSCAVVMPSVLKVGTSPDRTH 702
           S+ C V+M +++ V   PD ++
Sbjct: 4   SIICLVLMAAIVLVAARPDESY 25


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 558 NLSRPGYHTEAENLTPIGLHKFQVPT 481
           NL RP   T+  NLT + ++   + T
Sbjct: 630 NLVRPNTFTDKVNLTRVDMYANMIET 655


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +2

Query: 584 TSSIIPGFGA 613
           TSS++PGFG+
Sbjct: 115 TSSMVPGFGS 124


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +1

Query: 637 SLSCAVVMPSVLKVGTSPDRTH 702
           S+ C V+M +++ V   PD ++
Sbjct: 4   SIICLVLMAAIVLVAARPDESY 25


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +1

Query: 637 SLSCAVVMPSVLKVGTSPDRTH 702
           S+ C V+M +++ V   PD ++
Sbjct: 4   SIICLVLMAAIVLVAARPDESY 25


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,816
Number of Sequences: 438
Number of extensions: 5044
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)