Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22h08
(611 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L08582-1|AAF66141.1| 355|Homo sapiens lysosomal-associated memb... 36 0.11
J04182-1|AAA60382.1| 416|Homo sapiens lysosomal membrane glycop... 36 0.15
J03263-1|AAA59524.1| 385|Homo sapiens LAMP1 protein. 36 0.15
BC093044-1|AAH93044.1| 417|Homo sapiens lysosomal-associated me... 36 0.15
BC021288-1|AAH21288.1| 417|Homo sapiens lysosomal-associated me... 36 0.15
BC007845-1|AAH07845.2| 248|Homo sapiens LAMP1 protein protein. 36 0.15
BC006345-1|AAH06345.2| 308|Homo sapiens LAMP1 protein protein. 36 0.15
AL136221-7|CAI13797.1| 417|Homo sapiens lysosomal-associated me... 36 0.15
AB209319-1|BAD92556.1| 392|Homo sapiens LAMP1 protein variant p... 36 0.15
>L08582-1|AAF66141.1| 355|Homo sapiens lysosomal-associated
membrane glycoprotein-1 protein.
Length = 355
Score = 35.9 bits (79), Expect = 0.11
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +1
Query: 166 YTDSETNITCIVLKFAAQFNVTYTKVDNVSSFAHVVFNVPSNASVVNGSCAGDQWLEISW 345
Y S TN TC++ Q N+TY + DN + + N+ N + +GSC G + +
Sbjct: 161 YNVSGTNGTCLLASMGLQLNLTYERKDNTT--VTRLLNINPNTTSASGSC-GAHLVTLEL 217
Query: 346 LAPNTTI 366
+ TT+
Sbjct: 218 HSEGTTV 224
>J04182-1|AAA60382.1| 416|Homo sapiens lysosomal membrane
glycoprotein-1 protein.
Length = 416
Score = 35.5 bits (78), Expect = 0.15
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +1
Query: 166 YTDSETNITCIVLKFAAQFNVTYTKVDNVSSFAHVVFNVPSNASVVNGSCAGDQWLEISW 345
Y S TN TC++ Q N+TY + DN + + N+ N + +GSC G + +
Sbjct: 221 YNVSGTNGTCLLASMGLQLNLTYERKDNTT--VTRLLNINPNKTSASGSC-GAHLVTLEL 277
Query: 346 LAPNTTI 366
+ TT+
Sbjct: 278 HSEGTTV 284
Score = 32.7 bits (71), Expect = 1.0
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 5/141 (3%)
Frame = +1
Query: 193 CIVLKFAAQFNVTYTKVDNVSSFAHVVFNVPSNASVV--NGSCAGDQWLEISWLAP---N 357
CI+ F+A F+V Y D S ++ F++PS+A+VV SC + + S +
Sbjct: 40 CIMANFSAAFSVNY---DTKSGPKNMTFDLPSDATVVLNRSSCGKENTSDPSLVIAFGRG 96
Query: 358 TTIANNMXXXXXXXXXXXXXXXXSLNVSFSPELFVNASKANSLELYHGNEWMTPVATSYR 537
T+ N +L+ LF NAS + + + YR
Sbjct: 97 HTLTLNFTRNATRYSVQLMSFVYNLS---DTHLFPNASSKEIKTVESITDIRADIDKKYR 153
Query: 538 CEVATRFNMSSDSLTAASMTL 600
C T+ +M++ ++T T+
Sbjct: 154 CVSGTQVHMNNVTVTLHDATI 174
>J03263-1|AAA59524.1| 385|Homo sapiens LAMP1 protein.
Length = 385
Score = 35.5 bits (78), Expect = 0.15
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +1
Query: 166 YTDSETNITCIVLKFAAQFNVTYTKVDNVSSFAHVVFNVPSNASVVNGSCAGDQWLEISW 345
Y S TN TC++ Q N+TY + DN + + N+ N + +GSC G + +
Sbjct: 190 YNVSGTNGTCLLASMGLQLNLTYERKDNTT--VTRLLNINPNKTSASGSC-GAHLVTLEL 246
Query: 346 LAPNTTI 366
+ TT+
Sbjct: 247 HSEGTTV 253
Score = 33.5 bits (73), Expect = 0.60
Identities = 33/143 (23%), Positives = 59/143 (41%), Gaps = 5/143 (3%)
Frame = +1
Query: 187 ITCIVLKFAAQFNVTYTKVDNVSSFAHVVFNVPSNASVV--NGSCAGDQWLEISWLAP-- 354
+ CI+ F+A F+V Y D S ++ F++PS+A+VV SC + + S +
Sbjct: 7 VRCIMANFSAAFSVNY---DTKSGPKNMTFDLPSDATVVLNRSSCGKENTSDPSLVIAFG 63
Query: 355 -NTTIANNMXXXXXXXXXXXXXXXXSLNVSFSPELFVNASKANSLELYHGNEWMTPVATS 531
T+ N +L+ LF NAS + + +
Sbjct: 64 RGHTLTLNFTRNATRYSVQLMSFVYNLS---DTHLFPNASSKEIKTVESITDIRADIDKK 120
Query: 532 YRCEVATRFNMSSDSLTAASMTL 600
YRC T+ +M++ ++T T+
Sbjct: 121 YRCVSGTQVHMNNVTVTLHDATI 143
>BC093044-1|AAH93044.1| 417|Homo sapiens lysosomal-associated
membrane protein 1 protein.
Length = 417
Score = 35.5 bits (78), Expect = 0.15
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +1
Query: 166 YTDSETNITCIVLKFAAQFNVTYTKVDNVSSFAHVVFNVPSNASVVNGSCAGDQWLEISW 345
Y S TN TC++ Q N+TY + DN + + N+ N + +GSC G + +
Sbjct: 222 YNVSGTNGTCLLASMGLQLNLTYERKDNTT--VTRLLNINPNKTSASGSC-GAHLVTLEL 278
Query: 346 LAPNTTI 366
+ TT+
Sbjct: 279 HSEGTTV 285
Score = 32.7 bits (71), Expect = 1.0
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 5/141 (3%)
Frame = +1
Query: 193 CIVLKFAAQFNVTYTKVDNVSSFAHVVFNVPSNASVV--NGSCAGDQWLEISWLAP---N 357
CI+ F+A F+V Y D S ++ F++PS+A+VV SC + + S +
Sbjct: 41 CIMANFSAAFSVNY---DTKSGPKNMTFDLPSDATVVLNRSSCGKENTSDPSLVIAFGRG 97
Query: 358 TTIANNMXXXXXXXXXXXXXXXXSLNVSFSPELFVNASKANSLELYHGNEWMTPVATSYR 537
T+ N +L+ LF NAS + + + YR
Sbjct: 98 HTLTLNFTRNATRYSVQLMSFVYNLS---DTHLFPNASSKEIKTVESITDIRADIDKKYR 154
Query: 538 CEVATRFNMSSDSLTAASMTL 600
C T+ +M++ ++T T+
Sbjct: 155 CVSGTQVHMNNVTVTLHDATI 175
>BC021288-1|AAH21288.1| 417|Homo sapiens lysosomal-associated
membrane protein 1 protein.
Length = 417
Score = 35.5 bits (78), Expect = 0.15
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +1
Query: 166 YTDSETNITCIVLKFAAQFNVTYTKVDNVSSFAHVVFNVPSNASVVNGSCAGDQWLEISW 345
Y S TN TC++ Q N+TY + DN + + N+ N + +GSC G + +
Sbjct: 222 YNVSGTNGTCLLASMGLQLNLTYERKDNTT--VTRLLNINPNKTSASGSC-GAHLVTLEL 278
Query: 346 LAPNTTI 366
+ TT+
Sbjct: 279 HSEGTTV 285
Score = 32.7 bits (71), Expect = 1.0
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 5/141 (3%)
Frame = +1
Query: 193 CIVLKFAAQFNVTYTKVDNVSSFAHVVFNVPSNASVV--NGSCAGDQWLEISWLAP---N 357
CI+ F+A F+V Y D S ++ F++PS+A+VV SC + + S +
Sbjct: 41 CIMANFSAAFSVNY---DTKSGPKNMTFDLPSDATVVLNRSSCGKENTSDPSLVIAFGRG 97
Query: 358 TTIANNMXXXXXXXXXXXXXXXXSLNVSFSPELFVNASKANSLELYHGNEWMTPVATSYR 537
T+ N +L+ LF NAS + + + YR
Sbjct: 98 HTLTLNFTRNATRYSVQLMSFVYNLS---DTHLFPNASSKEIKTVESITDIRADIDKKYR 154
Query: 538 CEVATRFNMSSDSLTAASMTL 600
C T+ +M++ ++T T+
Sbjct: 155 CVSGTQVHMNNVTVTLHDATI 175
>BC007845-1|AAH07845.2| 248|Homo sapiens LAMP1 protein protein.
Length = 248
Score = 35.5 bits (78), Expect = 0.15
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +1
Query: 166 YTDSETNITCIVLKFAAQFNVTYTKVDNVSSFAHVVFNVPSNASVVNGSCAGDQWLEISW 345
Y S TN TC++ Q N+TY + DN + + N+ N + +GSC G + +
Sbjct: 53 YNVSGTNGTCLLASMGLQLNLTYERKDNTT--VTRLLNINPNKTSASGSC-GAHLVTLEL 109
Query: 346 LAPNTTI 366
+ TT+
Sbjct: 110 HSEGTTV 116
>BC006345-1|AAH06345.2| 308|Homo sapiens LAMP1 protein protein.
Length = 308
Score = 35.5 bits (78), Expect = 0.15
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +1
Query: 166 YTDSETNITCIVLKFAAQFNVTYTKVDNVSSFAHVVFNVPSNASVVNGSCAGDQWLEISW 345
Y S TN TC++ Q N+TY + DN + + N+ N + +GSC G + +
Sbjct: 113 YNVSGTNGTCLLASMGLQLNLTYERKDNTT--VTRLLNINPNKTSASGSC-GAHLVTLEL 169
Query: 346 LAPNTTI 366
+ TT+
Sbjct: 170 HSEGTTV 176
>AL136221-7|CAI13797.1| 417|Homo sapiens lysosomal-associated
membrane protein 1 protein.
Length = 417
Score = 35.5 bits (78), Expect = 0.15
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +1
Query: 166 YTDSETNITCIVLKFAAQFNVTYTKVDNVSSFAHVVFNVPSNASVVNGSCAGDQWLEISW 345
Y S TN TC++ Q N+TY + DN + + N+ N + +GSC G + +
Sbjct: 222 YNVSGTNGTCLLASMGLQLNLTYERKDNTT--VTRLLNINPNKTSASGSC-GAHLVTLEL 278
Query: 346 LAPNTTI 366
+ TT+
Sbjct: 279 HSEGTTV 285
Score = 32.7 bits (71), Expect = 1.0
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 5/141 (3%)
Frame = +1
Query: 193 CIVLKFAAQFNVTYTKVDNVSSFAHVVFNVPSNASVV--NGSCAGDQWLEISWLAP---N 357
CI+ F+A F+V Y D S ++ F++PS+A+VV SC + + S +
Sbjct: 41 CIMANFSAAFSVNY---DTKSGPKNMTFDLPSDATVVLNRSSCGKENTSDPSLVIAFGRG 97
Query: 358 TTIANNMXXXXXXXXXXXXXXXXSLNVSFSPELFVNASKANSLELYHGNEWMTPVATSYR 537
T+ N +L+ LF NAS + + + YR
Sbjct: 98 HTLTLNFTRNATRYSVQLMSFVYNLS---DTHLFPNASSKEIKTVESITDIRADIDKKYR 154
Query: 538 CEVATRFNMSSDSLTAASMTL 600
C T+ +M++ ++T T+
Sbjct: 155 CVSGTQVHMNNVTVTLHDATI 175
>AB209319-1|BAD92556.1| 392|Homo sapiens LAMP1 protein variant
protein.
Length = 392
Score = 35.5 bits (78), Expect = 0.15
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +1
Query: 166 YTDSETNITCIVLKFAAQFNVTYTKVDNVSSFAHVVFNVPSNASVVNGSCAGDQWLEISW 345
Y S TN TC++ Q N+TY + DN + + N+ N + +GSC G + +
Sbjct: 211 YNVSGTNGTCLLASMGLQLNLTYERKDNTT--VTRLLNINPNKTSASGSC-GAHLVTLEL 267
Query: 346 LAPNTTI 366
+ TT+
Sbjct: 268 HSEGTTV 274
Score = 32.7 bits (71), Expect = 1.0
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 5/141 (3%)
Frame = +1
Query: 193 CIVLKFAAQFNVTYTKVDNVSSFAHVVFNVPSNASVV--NGSCAGDQWLEISWLAP---N 357
CI+ F+A F+V Y D S ++ F++PS+A+VV SC + + S +
Sbjct: 30 CIMANFSAAFSVNY---DTKSGPKNMTFDLPSDATVVLNRSSCGKENTSDPSLVIAFGRG 86
Query: 358 TTIANNMXXXXXXXXXXXXXXXXSLNVSFSPELFVNASKANSLELYHGNEWMTPVATSYR 537
T+ N +L+ LF NAS + + + YR
Sbjct: 87 HTLTLNFTRNATRYSVQLMSFVYNLS---DTHLFPNASSKEIKTVESITDIRADIDKKYR 143
Query: 538 CEVATRFNMSSDSLTAASMTL 600
C T+ +M++ ++T T+
Sbjct: 144 CVSGTQVHMNNVTVTLHDATI 164
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.315 0.124 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,010,172
Number of Sequences: 237096
Number of extensions: 1356308
Number of successful extensions: 6733
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6733
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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