Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22h08
         (611 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-3511|AAF57215.3|  318|Drosophila melanogaster CG3305-PA...    53   4e-07
AY070618-1|AAL48089.1|  318|Drosophila melanogaster RE72002p pro...    50   2e-06
BT028816-1|ABI34197.1|  482|Drosophila melanogaster RT01022p pro...    30   2.8  
BT016125-1|AAV37010.1|  500|Drosophila melanogaster GM16860p pro...    30   2.8  
AE014134-793|AAF50966.2|  510|Drosophila melanogaster CG11924-PA...    30   2.8  
AE014134-792|AAO41153.1|  482|Drosophila melanogaster CG11924-PC...    30   2.8  
AE014134-791|AAO41152.1|  482|Drosophila melanogaster CG11924-PB...    30   2.8  
AE014134-790|AAO41151.1|  514|Drosophila melanogaster CG11924-PD...    30   2.8  

>AE014134-3511|AAF57215.3|  318|Drosophila melanogaster CG3305-PA
           protein.
          Length = 318

 Score = 52.8 bits (121), Expect = 4e-07
 Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
 Frame = +1

Query: 184 NITCIVLKFAAQFNVTYTKVDNVSSFAHVVFNVPSNASVVNGSCAGD--QWLEISWLAPN 357
           N +CI+L+ AAQ N TY   +   +F   ++N+PSNASV +  C     Q++ + W  P 
Sbjct: 112 NTSCIMLQMAAQLNFTYEARE--GNFTTGLYNIPSNASVEDAECKSQTTQFIHLIW-GPE 168

Query: 358 TTIANNMXXXXXXXXXXXXXXXXSLNVSFSPELFVNASKANSLELYHGNE--WMTPVATS 531
           T+   ++                 ++++  PE F +A +  +++L   ++  + TP   S
Sbjct: 169 TS-KQSLIMYFNKSNDTTVLSFMQIHLALLPEDFPDAKENQTVQLITRSDGAFKTPENMS 227

Query: 532 YRCEVATRFNMS 567
           Y C    + NM+
Sbjct: 228 YHCTRVQKINMT 239


>AY070618-1|AAL48089.1|  318|Drosophila melanogaster RE72002p
           protein.
          Length = 318

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
 Frame = +1

Query: 184 NITCIVLKFAAQFNVTYTKVDNVSSFAHVVFNVPSNASVVNGSCAGD--QWLEISWLAPN 357
           N +CI+L+ AAQ N TY   +   +F   + N+PSNASV +  C     Q++ + W  P 
Sbjct: 112 NTSCIMLQMAAQLNFTYEARE--GNFTTGLDNIPSNASVEDAECKSQTTQFIHLIW-GPE 168

Query: 358 TTIANNMXXXXXXXXXXXXXXXXSLNVSFSPELFVNASKANSLELYHGNE--WMTPVATS 531
           T+   ++                 ++++  PE F +A +  +++L   ++  + TP   S
Sbjct: 169 TS-KQSLIMYFNKSNDTTVLSFMQIHLALLPEDFPDAKENQTVQLITRSDGAFKTPENMS 227

Query: 532 YRCEVATRFNMS 567
           Y C    + NM+
Sbjct: 228 YHCTRVQKINMT 239


>BT028816-1|ABI34197.1|  482|Drosophila melanogaster RT01022p
           protein.
          Length = 482

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +3

Query: 339 QLVGAQHHHCQ*HDNLLPQEQNDEQLLPQESQ 434
           Q + A+HHH Q H     Q+Q  ++LL Q+ +
Sbjct: 229 QQLQAEHHHQQQHQQQQQQQQQQQELLEQQQR 260


>BT016125-1|AAV37010.1|  500|Drosophila melanogaster GM16860p
           protein.
          Length = 500

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +3

Query: 339 QLVGAQHHHCQ*HDNLLPQEQNDEQLLPQESQ 434
           Q + A+HHH Q H     Q+Q  ++LL Q+ +
Sbjct: 229 QQLQAEHHHQQQHQQQQQQQQQQQELLEQQQR 260


>AE014134-793|AAF50966.2|  510|Drosophila melanogaster CG11924-PA,
           isoform A protein.
          Length = 510

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +3

Query: 339 QLVGAQHHHCQ*HDNLLPQEQNDEQLLPQESQ 434
           Q + A+HHH Q H     Q+Q  ++LL Q+ +
Sbjct: 229 QQLQAEHHHQQQHQQQQQQQQQQQELLEQQQR 260


>AE014134-792|AAO41153.1|  482|Drosophila melanogaster CG11924-PC,
           isoform C protein.
          Length = 482

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +3

Query: 339 QLVGAQHHHCQ*HDNLLPQEQNDEQLLPQESQ 434
           Q + A+HHH Q H     Q+Q  ++LL Q+ +
Sbjct: 229 QQLQAEHHHQQQHQQQQQQQQQQQELLEQQQR 260


>AE014134-791|AAO41152.1|  482|Drosophila melanogaster CG11924-PB,
           isoform B protein.
          Length = 482

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +3

Query: 339 QLVGAQHHHCQ*HDNLLPQEQNDEQLLPQESQ 434
           Q + A+HHH Q H     Q+Q  ++LL Q+ +
Sbjct: 229 QQLQAEHHHQQQHQQQQQQQQQQQELLEQQQR 260


>AE014134-790|AAO41151.1|  514|Drosophila melanogaster CG11924-PD,
           isoform D protein.
          Length = 514

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +3

Query: 339 QLVGAQHHHCQ*HDNLLPQEQNDEQLLPQESQ 434
           Q + A+HHH Q H     Q+Q  ++LL Q+ +
Sbjct: 229 QQLQAEHHHQQQHQQQQQQQQQQQELLEQQQR 260


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.315    0.124    0.373 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,203,308
Number of Sequences: 53049
Number of extensions: 432518
Number of successful extensions: 1638
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1635
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)