Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22h08
(611 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 27 0.19
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 22 4.1
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 5.4
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 5.4
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 5.4
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 5.4
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 9.5
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 21 9.5
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 21 9.5
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 9.5
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 21 9.5
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 26.6 bits (56), Expect = 0.19
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 351 AQHHHCQ*HD-NLLPQEQNDEQLLPQESQCVLQPR 452
AQ H Q H+ +++ Q+Q Q Q+SQ + PR
Sbjct: 190 AQQQHLQAHEQHMMYQQQQQSQAASQQSQPGMHPR 224
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 22.2 bits (45), Expect = 4.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 277 NVPSNASVVNGSCAGDQWLEISWLAPNTTIANN 375
+VPS S V + L ISW AP T I +
Sbjct: 417 SVPSLVSNVRITSVKSSELSISWDAPITEIGGD 449
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 5.4
Identities = 12/55 (21%), Positives = 25/55 (45%)
Frame = +2
Query: 146 QTKETGHIQIQRPT*PALFLSLQLNSM*HIPKLTTCHPSLTSSSTYRVTLLW*TA 310
+TKE H + + L +N++ + L +CH + + Y++ + TA
Sbjct: 112 RTKEEPHAPYRYEAVAVIHKDLPINNVQGLRGLKSCHTGVGRNVGYKIPITKLTA 166
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 5.4
Identities = 12/55 (21%), Positives = 25/55 (45%)
Frame = +2
Query: 146 QTKETGHIQIQRPT*PALFLSLQLNSM*HIPKLTTCHPSLTSSSTYRVTLLW*TA 310
+TKE H + + L +N++ + L +CH + + Y++ + TA
Sbjct: 112 RTKEEPHAPYRYEAVAVIHKDLPINNVQGLRGLKSCHTGVGRNVGYKIPITKLTA 166
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 5.4
Identities = 12/55 (21%), Positives = 25/55 (45%)
Frame = +2
Query: 146 QTKETGHIQIQRPT*PALFLSLQLNSM*HIPKLTTCHPSLTSSSTYRVTLLW*TA 310
+TKE H + + L +N++ + L +CH + + Y++ + TA
Sbjct: 112 RTKEEPHAPYRYEAVAVIHKDLPINNVQGLRGLKSCHTGVGRNVGYKIPITKLTA 166
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.8 bits (44), Expect = 5.4
Identities = 9/40 (22%), Positives = 20/40 (50%)
Frame = +1
Query: 178 ETNITCIVLKFAAQFNVTYTKVDNVSSFAHVVFNVPSNAS 297
E+N C V + + +V+Y + +++ + + PS S
Sbjct: 327 ESNSRCSVKREKIKISVSYPSTETLNTKCNTLERTPSKCS 366
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.0 bits (42), Expect = 9.5
Identities = 11/43 (25%), Positives = 17/43 (39%)
Frame = -3
Query: 552 GRDLTPVRGRHRGHPFVAMVKLQGICFRSIYKQLWAEGHIETL 424
G TP++ H H V ++ G + +W G E L
Sbjct: 194 GSAYTPLKEDHDDHYGVPTLEELGFDTEGLLPPVWVGGESEAL 236
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.0 bits (42), Expect = 9.5
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +3
Query: 378 DNLLPQEQNDEQLLP 422
++ +P+E N E+LLP
Sbjct: 31 EDQIPREMNTERLLP 45
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.0 bits (42), Expect = 9.5
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +3
Query: 378 DNLLPQEQNDEQLLP 422
++ +P+E N E+LLP
Sbjct: 31 EDQIPREMNTERLLP 45
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.0 bits (42), Expect = 9.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 301 VNGSCAGDQWLEISWL 348
V G AGD L ISWL
Sbjct: 631 VCGVAAGDPPLTISWL 646
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 21.0 bits (42), Expect = 9.5
Identities = 5/15 (33%), Positives = 12/15 (80%)
Frame = -3
Query: 474 FRSIYKQLWAEGHIE 430
++++YKQ+W++ E
Sbjct: 285 YKTLYKQMWSQNITE 299
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.315 0.124 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,326
Number of Sequences: 438
Number of extensions: 2235
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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