Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22h06
(358 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC022267-1|AAH22267.1| 515|Homo sapiens male sterility domain c... 38 0.007
AK027756-1|BAB55347.1| 515|Homo sapiens protein ( Homo sapiens ... 38 0.007
AK001927-1|BAA91983.1| 515|Homo sapiens protein ( Homo sapiens ... 38 0.007
AK001324-1|BAA91625.1| 515|Homo sapiens protein ( Homo sapiens ... 38 0.007
BC017377-1|AAH17377.1| 515|Homo sapiens male sterility domain c... 31 1.0
AY600449-1|AAT42129.1| 515|Homo sapiens fatty acyl CoA reductas... 31 1.0
AY423606-1|AAR84086.1| 515|Homo sapiens putative fatty acyl red... 31 1.0
AY358784-1|AAQ89144.1| 515|Homo sapiens VSIP2423 protein. 31 1.0
CR533567-1|CAG38598.1| 691|Homo sapiens KIAA1536 protein. 28 7.4
BC003177-1|AAH03177.1| 691|Homo sapiens calcium binding and coi... 28 7.4
AY563137-1|AAT68474.1| 691|Homo sapiens calphoglin protein. 28 7.4
AY358397-1|AAQ88763.1| 691|Homo sapiens EESP2436 protein. 28 7.4
AK027881-1|BAB55428.1| 690|Homo sapiens protein ( Homo sapiens ... 28 7.4
AB040969-1|BAA96060.1| 645|Homo sapiens KIAA1536 protein protein. 28 7.4
Y00264-1|CAA68374.1| 695|Homo sapiens protein ( Human mRNA for ... 28 9.8
X13466-1|CAA31830.1| 695|Homo sapiens A4 amyloid protein precur... 28 9.8
X06989-1|CAA30050.1| 751|Homo sapiens amyloid A4 protein protein. 28 9.8
M34875-1|AAB59501.1| 547|Homo sapiens amyloid-beta protein prot... 28 9.8
M33112-1|AAB59502.1| 770|Homo sapiens amyloid-beta protein prot... 28 9.8
M28373-1|AAA58727.1| 484|Homo sapiens amyloid precursor protein... 28 9.8
M16765-1|AAA51722.1| 412|Homo sapiens APP protein. 28 9.8
D87675-1|BAA22264.1| 770|Homo sapiens amyloid precursor protein... 28 9.8
BC065529-1|AAH65529.1| 751|Homo sapiens amyloid beta (A4) precu... 28 9.8
BC030012-1|AAH30012.1| 698|Homo sapiens GLE1 RNA export mediato... 28 9.8
AY919674-1|AAW82435.1| 770|Homo sapiens amyloid beta (A4) precu... 28 9.8
AF282245-1|AAQ14327.1| 639|Homo sapiens amyloid precursor prote... 28 9.8
>BC022267-1|AAH22267.1| 515|Homo sapiens male sterility domain
containing 1 protein.
Length = 515
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/61 (24%), Positives = 35/61 (57%)
Frame = +2
Query: 2 NFDISKIDWPRYMLIWCIGLRKFIVKDGLKDSEYGMKKQRWLKIAHISFYTLFFGVVFSL 181
NFD+ +++W Y+ + +G++K+++K+ + ++ + L+ H F T F + + L
Sbjct: 422 NFDVRQLNWLEYIENYVLGVKKYLLKEDMAGIPKAKQRLKRLRNIHYLFNTALFLIAWRL 481
Query: 182 L 184
L
Sbjct: 482 L 482
>AK027756-1|BAB55347.1| 515|Homo sapiens protein ( Homo sapiens
cDNA FLJ14850 fis, clone PLACE1000636, weakly similar to
MALE STERILITY PROTEIN 2. ).
Length = 515
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/61 (24%), Positives = 35/61 (57%)
Frame = +2
Query: 2 NFDISKIDWPRYMLIWCIGLRKFIVKDGLKDSEYGMKKQRWLKIAHISFYTLFFGVVFSL 181
NFD+ +++W Y+ + +G++K+++K+ + ++ + L+ H F T F + + L
Sbjct: 422 NFDVRQLNWLEYIENYVLGVKKYLLKEDMAGIPKAKQRLKRLRNIHYLFNTALFLIAWRL 481
Query: 182 L 184
L
Sbjct: 482 L 482
>AK001927-1|BAA91983.1| 515|Homo sapiens protein ( Homo sapiens
cDNA FLJ11065 fis, clone PLACE1004868, weakly similar to
MALE STERILITY PROTEIN 2. ).
Length = 515
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/61 (24%), Positives = 35/61 (57%)
Frame = +2
Query: 2 NFDISKIDWPRYMLIWCIGLRKFIVKDGLKDSEYGMKKQRWLKIAHISFYTLFFGVVFSL 181
NFD+ +++W Y+ + +G++K+++K+ + ++ + L+ H F T F + + L
Sbjct: 422 NFDVRQLNWLEYIENYVLGVKKYLLKEDMAGIPKAKQRLKRLRNIHYLFNTALFLIAWRL 481
Query: 182 L 184
L
Sbjct: 482 L 482
>AK001324-1|BAA91625.1| 515|Homo sapiens protein ( Homo sapiens
cDNA FLJ10462 fis, clone NT2RP1001494, weakly similar to
MALE STERILITY PROTEIN 2. ).
Length = 515
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/61 (24%), Positives = 35/61 (57%)
Frame = +2
Query: 2 NFDISKIDWPRYMLIWCIGLRKFIVKDGLKDSEYGMKKQRWLKIAHISFYTLFFGVVFSL 181
NFD+ +++W Y+ + +G++K+++K+ + ++ + L+ H F T F + + L
Sbjct: 422 NFDVRQLNWLEYIENYVLGVKKYLLKEDMAGIPKAKQRLKRLRNIHYLFNTALFLIAWRL 481
Query: 182 L 184
L
Sbjct: 482 L 482
>BC017377-1|AAH17377.1| 515|Homo sapiens male sterility domain
containing 2 protein.
Length = 515
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/60 (18%), Positives = 29/60 (48%)
Frame = +2
Query: 2 NFDISKIDWPRYMLIWCIGLRKFIVKDGLKDSEYGMKKQRWLKIAHISFYTLFFGVVFSL 181
N D+ ++ W Y+ +C+G +K+++ + + K L+ F T+ +++ +
Sbjct: 422 NIDVRQLHWAEYIENYCLGTKKYVLNEEMSGLPAARKHLNKLRNIRYGFNTILVILIWRI 481
>AY600449-1|AAT42129.1| 515|Homo sapiens fatty acyl CoA reductase 1
protein.
Length = 515
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/60 (18%), Positives = 29/60 (48%)
Frame = +2
Query: 2 NFDISKIDWPRYMLIWCIGLRKFIVKDGLKDSEYGMKKQRWLKIAHISFYTLFFGVVFSL 181
N D+ ++ W Y+ +C+G +K+++ + + K L+ F T+ +++ +
Sbjct: 422 NIDVRQLHWAEYIENYCLGTKKYVLNEEMSGLPAARKHLNKLRNIRYGFNTILVILIWRI 481
>AY423606-1|AAR84086.1| 515|Homo sapiens putative fatty acyl
reductase protein.
Length = 515
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/60 (18%), Positives = 29/60 (48%)
Frame = +2
Query: 2 NFDISKIDWPRYMLIWCIGLRKFIVKDGLKDSEYGMKKQRWLKIAHISFYTLFFGVVFSL 181
N D+ ++ W Y+ +C+G +K+++ + + K L+ F T+ +++ +
Sbjct: 422 NIDVRQLHWAEYIENYCLGTKKYVLNEEMSGLPAARKHLNKLRNIRYGFNTILVILIWRI 481
>AY358784-1|AAQ89144.1| 515|Homo sapiens VSIP2423 protein.
Length = 515
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/60 (18%), Positives = 29/60 (48%)
Frame = +2
Query: 2 NFDISKIDWPRYMLIWCIGLRKFIVKDGLKDSEYGMKKQRWLKIAHISFYTLFFGVVFSL 181
N D+ ++ W Y+ +C+G +K+++ + + K L+ F T+ +++ +
Sbjct: 422 NIDVRQLHWAEYIENYCLGTKKYVLNEEMSGLPAARKHLNKLRNIRYGFNTILVILIWRI 481
>CR533567-1|CAG38598.1| 691|Homo sapiens KIAA1536 protein.
Length = 691
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +1
Query: 16 EDRLAALYADLVHRLEKVHRERRTQRQRVWNEETEMAEDSS 138
+D++ L A+++ RLEK +E RTQ Q V+ E +DSS
Sbjct: 423 KDKILKLSAEIL-RLEKAVQEERTQNQ-VFKTELAREKDSS 461
>BC003177-1|AAH03177.1| 691|Homo sapiens calcium binding and
coiled-coil domain 1 protein.
Length = 691
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +1
Query: 16 EDRLAALYADLVHRLEKVHRERRTQRQRVWNEETEMAEDSS 138
+D++ L A+++ RLEK +E RTQ Q V+ E +DSS
Sbjct: 423 KDKILKLSAEIL-RLEKAVQEERTQNQ-VFKTELAREKDSS 461
>AY563137-1|AAT68474.1| 691|Homo sapiens calphoglin protein.
Length = 691
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +1
Query: 16 EDRLAALYADLVHRLEKVHRERRTQRQRVWNEETEMAEDSS 138
+D++ L A+++ RLEK +E RTQ Q V+ E +DSS
Sbjct: 423 KDKILKLSAEIL-RLEKAVQEERTQNQ-VFKTELAREKDSS 461
>AY358397-1|AAQ88763.1| 691|Homo sapiens EESP2436 protein.
Length = 691
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +1
Query: 16 EDRLAALYADLVHRLEKVHRERRTQRQRVWNEETEMAEDSS 138
+D++ L A+++ RLEK +E RTQ Q V+ E +DSS
Sbjct: 423 KDKILKLSAEIL-RLEKAVQEERTQNQ-VFKTELAREKDSS 461
>AK027881-1|BAB55428.1| 690|Homo sapiens protein ( Homo sapiens
cDNA FLJ14975 fis, clone THYRO1001405, weakly similar to
PLECTIN. ).
Length = 690
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +1
Query: 16 EDRLAALYADLVHRLEKVHRERRTQRQRVWNEETEMAEDSS 138
+D++ L A+++ RLEK +E RTQ Q V+ E +DSS
Sbjct: 423 KDKILKLSAEIL-RLEKAVQEERTQNQ-VFKTELAREKDSS 461
>AB040969-1|BAA96060.1| 645|Homo sapiens KIAA1536 protein protein.
Length = 645
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +1
Query: 16 EDRLAALYADLVHRLEKVHRERRTQRQRVWNEETEMAEDSS 138
+D++ L A+++ RLEK +E RTQ Q V+ E +DSS
Sbjct: 435 KDKILKLSAEIL-RLEKAVQEERTQNQ-VFKTELAREKDSS 473
>Y00264-1|CAA68374.1| 695|Homo sapiens protein ( Human mRNA for
amyloid A4 precursor of Alzheimer's disease. ).
Length = 695
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 55 RLEKVHRERRTQRQRVWNEETEMAED 132
RLE HRER +Q R W E A++
Sbjct: 322 RLEAKHRERMSQVMREWEEAERQAKN 347
>X13466-1|CAA31830.1| 695|Homo sapiens A4 amyloid protein precursor
protein.
Length = 695
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 55 RLEKVHRERRTQRQRVWNEETEMAED 132
RLE HRER +Q R W E A++
Sbjct: 322 RLEAKHRERMSQVMREWEEAERQAKN 347
>X06989-1|CAA30050.1| 751|Homo sapiens amyloid A4 protein protein.
Length = 751
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 55 RLEKVHRERRTQRQRVWNEETEMAED 132
RLE HRER +Q R W E A++
Sbjct: 378 RLEAKHRERMSQVMREWEEAERQAKN 403
>M34875-1|AAB59501.1| 547|Homo sapiens amyloid-beta protein
protein.
Length = 547
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 55 RLEKVHRERRTQRQRVWNEETEMAED 132
RLE HRER +Q R W E A++
Sbjct: 397 RLEAKHRERMSQVMREWEEAERQAKN 422
>M33112-1|AAB59502.1| 770|Homo sapiens amyloid-beta protein
protein.
Length = 770
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 55 RLEKVHRERRTQRQRVWNEETEMAED 132
RLE HRER +Q R W E A++
Sbjct: 397 RLEAKHRERMSQVMREWEEAERQAKN 422
>M28373-1|AAA58727.1| 484|Homo sapiens amyloid precursor protein
protein.
Length = 484
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 55 RLEKVHRERRTQRQRVWNEETEMAED 132
RLE HRER +Q R W E A++
Sbjct: 299 RLEAKHRERMSQVMREWEEAERQAKN 324
>M16765-1|AAA51722.1| 412|Homo sapiens APP protein.
Length = 412
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 55 RLEKVHRERRTQRQRVWNEETEMAED 132
RLE HRER +Q R W E A++
Sbjct: 39 RLEAKHRERMSQVMREWEEAERQAKN 64
>D87675-1|BAA22264.1| 770|Homo sapiens amyloid precursor protein
protein.
Length = 770
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 55 RLEKVHRERRTQRQRVWNEETEMAED 132
RLE HRER +Q R W E A++
Sbjct: 397 RLEAKHRERMSQVMREWEEAERQAKN 422
>BC065529-1|AAH65529.1| 751|Homo sapiens amyloid beta (A4)
precursor protein (peptidase nexin-II, Alzheimer
disease) protein.
Length = 751
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 55 RLEKVHRERRTQRQRVWNEETEMAED 132
RLE HRER +Q R W E A++
Sbjct: 378 RLEAKHRERMSQVMREWEEAERQAKN 403
>BC030012-1|AAH30012.1| 698|Homo sapiens GLE1 RNA export
mediator-like (yeast) protein.
Length = 698
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 43 DLVHRLEKVHRERRTQRQRVWNEETE 120
D V E VHR + T+ R+W EE E
Sbjct: 130 DCVRMYELVHRMKGTEGLRLWQEEQE 155
>AY919674-1|AAW82435.1| 770|Homo sapiens amyloid beta (A4)
precursor protein (protease nexin-II, Alzheimer disease)
protein.
Length = 770
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 55 RLEKVHRERRTQRQRVWNEETEMAED 132
RLE HRER +Q R W E A++
Sbjct: 397 RLEAKHRERMSQVMREWEEAERQAKN 422
>AF282245-1|AAQ14327.1| 639|Homo sapiens amyloid precursor protein
639 protein.
Length = 639
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 55 RLEKVHRERRTQRQRVWNEETEMAED 132
RLE HRER +Q R W E A++
Sbjct: 266 RLEAKHRERMSQVMREWEEAERQAKN 291
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,499,429
Number of Sequences: 237096
Number of extensions: 895265
Number of successful extensions: 1836
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1836
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -