Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22h06
         (358 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF098505-1|AAC67415.1|  536|Caenorhabditis elegans Hypothetical ...    38   0.003
Z92773-1|CAB07131.1|  395|Caenorhabditis elegans Hypothetical pr...    27   2.9  
AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of...    27   2.9  
Z77668-3|CAI46576.1|  284|Caenorhabditis elegans Hypothetical pr...    27   3.9  
Z77655-9|CAI46567.1|  284|Caenorhabditis elegans Hypothetical pr...    27   3.9  
Z72510-3|CAA96653.1|  366|Caenorhabditis elegans Hypothetical pr...    26   6.7  
U00047-10|AAA50686.1|  471|Caenorhabditis elegans Hypothetical p...    26   6.7  
Z83128-6|CAB05638.2|  353|Caenorhabditis elegans Hypothetical pr...    26   8.9  
AL110482-9|CAB60340.3|  372|Caenorhabditis elegans Hypothetical ...    26   8.9  
AF040652-5|AAB95022.2|  378|Caenorhabditis elegans Hypothetical ...    26   8.9  

>AF098505-1|AAC67415.1|  536|Caenorhabditis elegans Hypothetical
           protein Y71H10A.2 protein.
          Length = 536

 Score = 37.5 bits (83), Expect = 0.003
 Identities = 11/31 (35%), Positives = 24/31 (77%)
 Frame = +2

Query: 2   NFDISKIDWPRYMLIWCIGLRKFIVKDGLKD 94
           NFD+ ++DW  Y+  + +G++KF++K+ L++
Sbjct: 423 NFDVRQVDWNSYLFDYVMGIKKFLLKENLEN 453


>Z92773-1|CAB07131.1|  395|Caenorhabditis elegans Hypothetical
           protein W08E3.3 protein.
          Length = 395

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = +1

Query: 19  DRLAALYADLVHRLEKVHRERRTQRQRVWNEETEMAEDSSH*FLYA 156
           D+   +  D + R++K   E++  RQ +WNE+ E+   + H FL A
Sbjct: 175 DKTKKIEYDTLVRVKKCLEEKKPVRQELWNEK-EIEILNKHLFLTA 219


>AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of
           constitutive dauerformation protein 2 protein.
          Length = 1446

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
 Frame = -2

Query: 330 SFLSHRIY*VHFNATYKTY---KPKCNCYI 250
           SF  HR+     ++TYKTY   + KCNC+I
Sbjct: 112 SFCDHRV-----DSTYKTYHYEQEKCNCFI 136


>Z77668-3|CAI46576.1|  284|Caenorhabditis elegans Hypothetical
           protein R11G10.3 protein.
          Length = 284

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +1

Query: 202 FYVLM*FEYDRRSNT*NITIAFGFVGFICCIKMYLVN 312
           F VLM       S   NI +A  FV  +C + ++LVN
Sbjct: 140 FVVLMSLYQHEESFVNNIQVALSFVICLCLVVLFLVN 176


>Z77655-9|CAI46567.1|  284|Caenorhabditis elegans Hypothetical
           protein R11G10.3 protein.
          Length = 284

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +1

Query: 202 FYVLM*FEYDRRSNT*NITIAFGFVGFICCIKMYLVN 312
           F VLM       S   NI +A  FV  +C + ++LVN
Sbjct: 140 FVVLMSLYQHEESFVNNIQVALSFVICLCLVVLFLVN 176


>Z72510-3|CAA96653.1|  366|Caenorhabditis elegans Hypothetical
           protein F53B7.4 protein.
          Length = 366

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -3

Query: 317 IEFTKYILMQHIKPTNPNAIVI 252
           +  T +++  H +P NPN I++
Sbjct: 64  VSITNFLMFSHRRPRNPNEIIL 85


>U00047-10|AAA50686.1|  471|Caenorhabditis elegans Hypothetical
           protein ZK418.2a protein.
          Length = 471

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = -1

Query: 178 RKYDSKEQRIKTNVSYLQPSLFLHSIL 98
           +K+DS  Q+I++N   +Q +L +HS +
Sbjct: 100 KKFDSVGQQIRSNCCVVQHNLVMHSFV 126


>Z83128-6|CAB05638.2|  353|Caenorhabditis elegans Hypothetical
           protein W01D2.4 protein.
          Length = 353

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 16/55 (29%), Positives = 29/55 (52%)
 Frame = +2

Query: 38  MLIWCIGLRKFIVKDGLKDSEYGMKKQRWLKIAHISFYTLFFGVVFSLLYLACRI 202
           M ++ +   KFI+   + +     +  R+ +    SF+ L FGV+F +LY+ C I
Sbjct: 6   MSLFYVVSNKFILWQEVYECPIERRNSRFERPLLGSFF-LAFGVLFIILYIPCLI 59


>AL110482-9|CAB60340.3|  372|Caenorhabditis elegans Hypothetical
           protein Y39G8B.4 protein.
          Length = 372

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
 Frame = +2

Query: 98  EYGMKKQRWLKIAHISF---YTLFFGVVFSLLYLACRIFMYLCNLNTIAAQTLKI*QLH 265
           +Y  K + W+ +  I F   +T+ F +VF   YL+    + +  ++ I A  L +   H
Sbjct: 164 DYENKSRTWIALLIIFFSQTFTMIFSIVFFFNYLSYVFGISIIAISNIGAVMLMLYSRH 222


>AF040652-5|AAB95022.2|  378|Caenorhabditis elegans Hypothetical
           protein T05A8.5 protein.
          Length = 378

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +1

Query: 25  LAALYADLVHRLEKVHRERRTQRQRVWNEETEMAEDS 135
           LA++ AD   RL K+  + +   + +WNE+  +  D+
Sbjct: 288 LASVSADRQIRLWKIEEDGQAVLKPIWNEDVPLEADN 324


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,958,312
Number of Sequences: 27780
Number of extensions: 156712
Number of successful extensions: 409
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 409
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)