Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22h06
         (358 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   4.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   5.8  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   5.8  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   5.8  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    21   5.8  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    20   7.6  

>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = +2

Query: 47  WCIGLRKFIVKDGLKDSEYGMKKQRWLKIAHISFYTLFF 163
           W  G++ F   + L D+++ +    W+ ++  SF+  FF
Sbjct: 391 WEEGMKVF--DELLLDADWSVNAGMWMWLSCSSFFQQFF 427


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 279 FYMLH*NVLSKF 314
           FYML+ N+LS F
Sbjct: 420 FYMLYQNILSYF 431


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 5   FDISKIDWPRYMLI 46
           FD     WP++MLI
Sbjct: 576 FDFCGCGWPQHMLI 589


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +1

Query: 76  ERRTQRQRVWNEETEMAEDSSH*FLYAV 159
           + R+Q + +WN  T+ A  +   FL++V
Sbjct: 30  QNRSQEEDLWNLATDRAGLAILLFLFSV 57


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 222 KLHKYIKILQARYNKENTTPK 160
           +L K IK L+   +K+N TPK
Sbjct: 5   ELKKTIKNLRKVCSKKNDTPK 25


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 95  SEYGMKKQRWLKIAHISFYTL 157
           S YG+  QRW   A  +  T+
Sbjct: 242 STYGVSGQRWQYAARAAISTM 262


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,923
Number of Sequences: 438
Number of extensions: 1902
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8308335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)