Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22h04
         (771 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060713-1|AAL28261.1|  596|Drosophila melanogaster GH15479p pro...    30   4.0  
AE014296-3503|AAF51694.1|  596|Drosophila melanogaster CG9389-PA...    30   4.0  
U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type ...    29   5.3  
AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA...    29   5.3  

>AY060713-1|AAL28261.1|  596|Drosophila melanogaster GH15479p
           protein.
          Length = 596

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
 Frame = +3

Query: 516 SNGGNEVREGEIGRNGELVEFEKVILEEIILMECNEVQKP*SSRRCC*NAKYRE-TNESG 692
           S+  NE  E E  +  +  +F    L+ + L+ C EV+K   +     N K +E T +  
Sbjct: 253 SDEENEPEEEEFPKLPD--QFSASDLDTLFLLACREVKKA-GAIALAENKKNQEYTTKKH 309

Query: 693 TNDFRLTNENLVXENF 740
           TND     +N+V E+F
Sbjct: 310 TNDIVTPTDNIVEESF 325


>AE014296-3503|AAF51694.1|  596|Drosophila melanogaster CG9389-PA
           protein.
          Length = 596

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
 Frame = +3

Query: 516 SNGGNEVREGEIGRNGELVEFEKVILEEIILMECNEVQKP*SSRRCC*NAKYRE-TNESG 692
           S+  NE  E E  +  +  +F    L+ + L+ C EV+K   +     N K +E T +  
Sbjct: 253 SDEENEPEEEEFPKLPD--QFSASDLDTLFLLACREVKKA-GAIALAENKKNQEYTTKKH 309

Query: 693 TNDFRLTNENLVXENF 740
           TND     +N+V E+F
Sbjct: 310 TNDIVTPTDNIVEESF 325


>U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type IV
           alpha 2 protein.
          Length = 1761

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = +3

Query: 432 DEVDEVREGARGRYGVNGVREGDFRGNNSNGGNEVREGEIGRNG 563
           D+ ++ R+G+ G  G  G  E   RG+  + G + R+GE GR+G
Sbjct: 627 DDGEKGRDGSDGSKGERG--ETGQRGDYGDAGYQGRDGEPGRDG 668


>AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA
           protein.
          Length = 1940

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = +3

Query: 432 DEVDEVREGARGRYGVNGVREGDFRGNNSNGGNEVREGEIGRNG 563
           D+ ++ R+G+ G  G  G  E   RG+  + G + R+GE GR+G
Sbjct: 627 DDGEKGRDGSDGSKGERG--ETGQRGDYGDAGYQGRDGEPGRDG 668


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,186,527
Number of Sequences: 53049
Number of extensions: 492439
Number of successful extensions: 1456
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1448
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)