Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22g24
(704 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC015578-1|AAH15578.1| 336|Homo sapiens torsin family 1, member... 151 2e-36
AL158207-1|CAC88165.1| 336|Homo sapiens torsin family 1, member... 151 2e-36
AF007872-1|AAC51733.1| 266|Homo sapiens torsinB protein. 150 4e-36
BT006931-1|AAP35577.1| 332|Homo sapiens dystonia 1, torsion (au... 141 2e-33
BC000674-1|AAH00674.1| 332|Homo sapiens torsin family 1, member... 141 2e-33
AL158207-3|CAC88168.1| 332|Homo sapiens torsin family 1, member... 141 2e-33
AF007871-1|AAC51732.1| 332|Homo sapiens torsinA protein. 141 2e-33
AY358180-1|AAQ88547.1| 321|Homo sapiens TOR2A protein. 117 4e-26
AL162426-11|CAI41186.1| 321|Homo sapiens torsin family 2, membe... 117 5e-26
CR457354-1|CAG33635.1| 397|Homo sapiens TOR3A protein. 116 1e-25
BC011746-1|AAH11746.1| 397|Homo sapiens torsin family 3, member... 116 1e-25
BC007571-1|AAH07571.1| 397|Homo sapiens torsin family 3, member... 116 1e-25
BC001085-1|AAH01085.1| 397|Homo sapiens torsin family 3, member... 116 1e-25
AL139132-7|CAH70928.1| 397|Homo sapiens torsin family 3, member... 116 1e-25
AK025998-1|BAB15312.1| 397|Homo sapiens protein ( Homo sapiens ... 116 1e-25
AJ318044-1|CAC88129.1| 397|Homo sapiens ADIR1 protein. 116 1e-25
AJ299403-1|CAC13973.1| 397|Homo sapiens ADIR1 protein. 116 1e-25
BC018292-1|AAH18292.1| 397|Homo sapiens torsin family 3, member... 113 4e-25
AL139132-8|CAH70929.1| 336|Homo sapiens torsin family 3, member... 98 2e-20
AJ318044-2|CAC88130.1| 336|Homo sapiens ADIR2 protein. 98 2e-20
AJ299441-1|CAC14461.1| 336|Homo sapiens ADIR2 protein. 98 2e-20
AL139132-9|CAH70930.1| 174|Homo sapiens torsin family 3, member... 86 1e-16
AL162426-12|CAI41187.1| 253|Homo sapiens torsin family 2, membe... 79 1e-14
AL162426-10|CAI41185.1| 242|Homo sapiens torsin family 2, membe... 79 1e-14
AK075520-1|BAC11667.1| 242|Homo sapiens protein ( Homo sapiens ... 79 1e-14
AK027677-1|BAB55288.1| 253|Homo sapiens protein ( Homo sapiens ... 79 1e-14
BC062340-1|AAH62340.1| 247|Homo sapiens TOR2A protein protein. 78 3e-14
AL158207-2|CAC88166.1| 140|Homo sapiens torsin family 1, member... 70 7e-12
BC014484-1|AAH14484.1| 197|Homo sapiens TOR1A protein protein. 66 9e-11
BC088368-1|AAH88368.1| 181|Homo sapiens TOR3A protein protein. 64 4e-10
BC006404-1|AAH06404.1| 707|Homo sapiens ClpB caseinolytic pepti... 53 1e-06
AK023214-1|BAB14467.1| 677|Homo sapiens protein ( Homo sapiens ... 53 1e-06
AK092388-1|BAC03876.1| 136|Homo sapiens protein ( Homo sapiens ... 50 6e-06
BC006257-1|AAH06257.1| 315|Homo sapiens CLPB protein protein. 49 2e-05
AL834484-1|CAD39142.1| 322|Homo sapiens hypothetical protein pr... 49 2e-05
BX255925-5|CAM24150.1| 423|Homo sapiens novel protein (FLJ20245... 41 0.005
AK000252-1|BAA91032.1| 423|Homo sapiens protein ( Homo sapiens ... 41 0.005
BC100910-1|AAI00911.1| 169|Homo sapiens TOR2A protein protein. 40 0.009
BC100909-1|AAI00910.1| 167|Homo sapiens TOR2A protein protein. 40 0.009
BC100908-1|AAI00909.1| 169|Homo sapiens TOR2A protein protein. 40 0.009
BC100907-1|AAI00908.1| 169|Homo sapiens TOR2A protein protein. 40 0.009
AL139132-6|CAH70927.1| 153|Homo sapiens torsin family 3, member... 33 0.99
BC005038-1|AAH05038.1| 789|Homo sapiens CHD1L protein protein. 30 7.0
>BC015578-1|AAH15578.1| 336|Homo sapiens torsin family 1, member B
(torsin B) protein.
Length = 336
Score = 151 bits (366), Expect = 2e-36
Identities = 80/216 (37%), Positives = 122/216 (56%), Gaps = 4/216 (1%)
Frame = +1
Query: 67 LRDSLSQRMFGQPLVNE-LFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIA 243
L+ L +++FGQ L E +F ++ + N N KK L +SLHGW+G GKNF S ++A
Sbjct: 68 LKLDLEEKLFGQHLATEVIFKALTGFRNNKNP----KKPLTLSLHGWAGTGKNFVSQIVA 123
Query: 244 EAIYRKGMQSNYVKLFMGKKDFDCYELEKKKQ-MLVNTLNTLVKKCPKSLIIFDEIHHMC 420
E ++ KG++SN+V LF+ F + K Q L + V C S+ IFDE+ +
Sbjct: 124 ENLHPKGLKSNFVHLFVSTLHFPHEQKIKLYQDQLQKWIRGNVSACANSVFIFDEMDKLH 183
Query: 421 PSVLDTIIPMLDHHSAVDEVDYRNTIFIFISNIGGHEIATKLLELYEKGVTRSEVEFRDF 600
P ++D I P LD++ VD V YR IFIF+SN GG I L+ + G R +++ +D
Sbjct: 184 PGIIDAIKPFLDYYEQVDGVSYRKAIFIFLSNAGGDLITKTALDFWRAGRKREDIQLKDL 243
Query: 601 EPIIRRTAY--FQGGFEKAAAIAHHLIDHYVPFLPL 702
EP++ + G + I +LID+++PFLPL
Sbjct: 244 EPVLSVGVFNNKHSGLWHSGLIDKNLIDYFIPFLPL 279
>AL158207-1|CAC88165.1| 336|Homo sapiens torsin family 1, member B
(torsin B) protein.
Length = 336
Score = 151 bits (366), Expect = 2e-36
Identities = 80/216 (37%), Positives = 122/216 (56%), Gaps = 4/216 (1%)
Frame = +1
Query: 67 LRDSLSQRMFGQPLVNE-LFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIA 243
L+ L +++FGQ L E +F ++ + N N KK L +SLHGW+G GKNF S ++A
Sbjct: 68 LKLDLEEKLFGQHLATEVIFKALTGFRNNKNP----KKPLTLSLHGWAGTGKNFVSQIVA 123
Query: 244 EAIYRKGMQSNYVKLFMGKKDFDCYELEKKKQ-MLVNTLNTLVKKCPKSLIIFDEIHHMC 420
E ++ KG++SN+V LF+ F + K Q L + V C S+ IFDE+ +
Sbjct: 124 ENLHPKGLKSNFVHLFVSTLHFPHEQKIKLYQDQLQKWIRGNVSACANSVFIFDEMDKLH 183
Query: 421 PSVLDTIIPMLDHHSAVDEVDYRNTIFIFISNIGGHEIATKLLELYEKGVTRSEVEFRDF 600
P ++D I P LD++ VD V YR IFIF+SN GG I L+ + G R +++ +D
Sbjct: 184 PGIIDAIKPFLDYYEQVDGVSYRKAIFIFLSNAGGDLITKTALDFWRAGRKREDIQLKDL 243
Query: 601 EPIIRRTAY--FQGGFEKAAAIAHHLIDHYVPFLPL 702
EP++ + G + I +LID+++PFLPL
Sbjct: 244 EPVLSVGVFNNKHSGLWHSGLIDKNLIDYFIPFLPL 279
>AF007872-1|AAC51733.1| 266|Homo sapiens torsinB protein.
Length = 266
Score = 150 bits (364), Expect = 4e-36
Identities = 79/212 (37%), Positives = 120/212 (56%), Gaps = 4/212 (1%)
Frame = +1
Query: 79 LSQRMFGQPLVNE-LFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAEAIY 255
L +++FGQ L E +F ++ + N N KK L +SLHGW+G GKNF S ++AE ++
Sbjct: 2 LEEKLFGQHLATEVIFKALTGFRNNKNP----KKPLTLSLHGWAGTGKNFVSQIVAENLH 57
Query: 256 RKGMQSNYVKLFMGKKDFDCYELEKKKQ-MLVNTLNTLVKKCPKSLIIFDEIHHMCPSVL 432
KG++SN+V LF+ F + K Q L + V C S+ IFDE+ + P ++
Sbjct: 58 PKGLKSNFVHLFVSTLHFPHEQKIKLYQDQLQKWIRGNVSACANSVFIFDEMDKLHPGII 117
Query: 433 DTIIPMLDHHSAVDEVDYRNTIFIFISNIGGHEIATKLLELYEKGVTRSEVEFRDFEPII 612
D I P LD++ VD V YR IFIF+SN GG I L+ + G R +++ +D EP++
Sbjct: 118 DAIKPFLDYYEQVDGVSYRKAIFIFLSNAGGDLITKTALDFWRAGRKREDIQLKDLEPVL 177
Query: 613 RRTAY--FQGGFEKAAAIAHHLIDHYVPFLPL 702
+ G + I +LID+++PFLPL
Sbjct: 178 SVGVFNNKHSGLWHSGLIDKNLIDYFIPFLPL 209
>BT006931-1|AAP35577.1| 332|Homo sapiens dystonia 1, torsion
(autosomal dominant; torsin A) protein.
Length = 332
Score = 141 bits (342), Expect = 2e-33
Identities = 80/218 (36%), Positives = 118/218 (54%), Gaps = 3/218 (1%)
Frame = +1
Query: 58 RYELRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTM 237
R L+ L +FGQ L ++ I++A IN KK L +SLHGW+G GKNF S +
Sbjct: 58 REALQKDLDDNLFGQHLAKKI--ILNAVFGFINNPKP-KKPLTLSLHGWTGTGKNFVSKI 114
Query: 238 IAEAIYRKGMQSNYVKLFMGKKDFD-CYELEKKKQMLVNTLNTLVKKCPKSLIIFDEIHH 414
IAE IY G+ S+YV LF+ F + K L + V C +S+ IFDE+
Sbjct: 115 IAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSACARSIFIFDEMDK 174
Query: 415 MCPSVLDTIIPMLDHHSAVDEVDYRNTIFIFISNIGGHEIATKLLELYEKGVTRSEVEFR 594
M ++D I P LD++ VD V Y+ +FIF+SN G I L+ + G R +++ +
Sbjct: 175 MHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALDFWRSGKQREDIKLK 234
Query: 595 DFEPIIRRTAY--FQGGFEKAAAIAHHLIDHYVPFLPL 702
D E + + + GF ++ I +LID++VPFLPL
Sbjct: 235 DIEHALSVSVFNNKNSGFWHSSLIHRNLIDYFVPFLPL 272
>BC000674-1|AAH00674.1| 332|Homo sapiens torsin family 1, member A
(torsin A) protein.
Length = 332
Score = 141 bits (342), Expect = 2e-33
Identities = 80/218 (36%), Positives = 118/218 (54%), Gaps = 3/218 (1%)
Frame = +1
Query: 58 RYELRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTM 237
R L+ L +FGQ L ++ I++A IN KK L +SLHGW+G GKNF S +
Sbjct: 58 REALQKDLDDNLFGQHLAKKI--ILNAVFGFINNPKP-KKPLTLSLHGWTGTGKNFVSKI 114
Query: 238 IAEAIYRKGMQSNYVKLFMGKKDFD-CYELEKKKQMLVNTLNTLVKKCPKSLIIFDEIHH 414
IAE IY G+ S+YV LF+ F + K L + V C +S+ IFDE+
Sbjct: 115 IAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSACARSIFIFDEMDK 174
Query: 415 MCPSVLDTIIPMLDHHSAVDEVDYRNTIFIFISNIGGHEIATKLLELYEKGVTRSEVEFR 594
M ++D I P LD++ VD V Y+ +FIF+SN G I L+ + G R +++ +
Sbjct: 175 MHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALDFWRSGKQREDIKLK 234
Query: 595 DFEPIIRRTAY--FQGGFEKAAAIAHHLIDHYVPFLPL 702
D E + + + GF ++ I +LID++VPFLPL
Sbjct: 235 DIEHALSVSVFNNKNSGFWHSSLIHRNLIDYFVPFLPL 272
>AL158207-3|CAC88168.1| 332|Homo sapiens torsin family 1, member A
(torsin A) protein.
Length = 332
Score = 141 bits (342), Expect = 2e-33
Identities = 80/218 (36%), Positives = 118/218 (54%), Gaps = 3/218 (1%)
Frame = +1
Query: 58 RYELRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTM 237
R L+ L +FGQ L ++ I++A IN KK L +SLHGW+G GKNF S +
Sbjct: 58 REALQKDLDDNLFGQHLAKKI--ILNAVFGFINNPKP-KKPLTLSLHGWTGTGKNFVSKI 114
Query: 238 IAEAIYRKGMQSNYVKLFMGKKDFD-CYELEKKKQMLVNTLNTLVKKCPKSLIIFDEIHH 414
IAE IY G+ S+YV LF+ F + K L + V C +S+ IFDE+
Sbjct: 115 IAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSACARSIFIFDEMDK 174
Query: 415 MCPSVLDTIIPMLDHHSAVDEVDYRNTIFIFISNIGGHEIATKLLELYEKGVTRSEVEFR 594
M ++D I P LD++ VD V Y+ +FIF+SN G I L+ + G R +++ +
Sbjct: 175 MHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALDFWRSGKQREDIKLK 234
Query: 595 DFEPIIRRTAY--FQGGFEKAAAIAHHLIDHYVPFLPL 702
D E + + + GF ++ I +LID++VPFLPL
Sbjct: 235 DIEHALSVSVFNNKNSGFWHSSLIDRNLIDYFVPFLPL 272
>AF007871-1|AAC51732.1| 332|Homo sapiens torsinA protein.
Length = 332
Score = 141 bits (342), Expect = 2e-33
Identities = 80/218 (36%), Positives = 118/218 (54%), Gaps = 3/218 (1%)
Frame = +1
Query: 58 RYELRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTM 237
R L+ L +FGQ L ++ I++A IN KK L +SLHGW+G GKNF S +
Sbjct: 58 REALQKDLDDNLFGQHLAKKI--ILNAVFGFINNPKP-KKPLTLSLHGWTGTGKNFVSKI 114
Query: 238 IAEAIYRKGMQSNYVKLFMGKKDFD-CYELEKKKQMLVNTLNTLVKKCPKSLIIFDEIHH 414
IAE IY G+ S+YV LF+ F + K L + V C +S+ IFDE+
Sbjct: 115 IAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSACARSIFIFDEMDK 174
Query: 415 MCPSVLDTIIPMLDHHSAVDEVDYRNTIFIFISNIGGHEIATKLLELYEKGVTRSEVEFR 594
M ++D I P LD++ VD V Y+ +FIF+SN G I L+ + G R +++ +
Sbjct: 175 MHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALDFWRSGKQREDIKLK 234
Query: 595 DFEPIIRRTAY--FQGGFEKAAAIAHHLIDHYVPFLPL 702
D E + + + GF ++ I +LID++VPFLPL
Sbjct: 235 DIEHALSVSVFNNKNSGFWHSSLIDRNLIDYFVPFLPL 272
>AY358180-1|AAQ88547.1| 321|Homo sapiens TOR2A protein.
Length = 321
Score = 117 bits (282), Expect = 4e-26
Identities = 71/215 (33%), Positives = 112/215 (52%), Gaps = 3/215 (1%)
Frame = +1
Query: 67 LRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAE 246
L L+Q + GQ L L ++ A K + + K LV+SLHGW+G GK++ S+++A
Sbjct: 52 LECDLAQHLAGQHLAKAL--VVKALKAFVRDP-APTKPLVLSLHGWTGTGKSYVSSLLAH 108
Query: 247 AIYRKGMQSNYVKLFMGKKDFDC-YELEKKKQMLVNTLNTLVKKCPKSLIIFDEIHHMCP 423
+++ G++S V F F +E+ K+ L + + + C +SL +FDE+ M P
Sbjct: 109 YLFQGGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMPP 168
Query: 424 SVLDTIIPMLDHHSAVDEVDYRNTIFIFISNIGGHEIATKLLELYEKGVTRSEVEFRDFE 603
+++ + P L V +YR IFIFISN GG +I LE + R E+ ++ E
Sbjct: 169 GLMEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVALEAWRSRRDREEILLQELE 228
Query: 604 PIIRRTAYF--QGGFEKAAAIAHHLIDHYVPFLPL 702
P+I R GF + + L+D VPFLPL
Sbjct: 229 PVISRAVLDNPHHGFSNSGIMEERLLDAVVPFLPL 263
>AL162426-11|CAI41186.1| 321|Homo sapiens torsin family 2, member A
protein.
Length = 321
Score = 117 bits (281), Expect = 5e-26
Identities = 71/215 (33%), Positives = 112/215 (52%), Gaps = 3/215 (1%)
Frame = +1
Query: 67 LRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAE 246
L L+Q + GQ L L ++ A K + + K LV+SLHGW+G GK++ S+++A
Sbjct: 52 LECDLAQHLAGQHLAKAL--VVKALKAFVRDP-APTKPLVLSLHGWTGTGKSYVSSLLAH 108
Query: 247 AIYRKGMQSNYVKLFMGKKDFDC-YELEKKKQMLVNTLNTLVKKCPKSLIIFDEIHHMCP 423
+++ G++S V F F +E+ K+ L + + + C +SL +FDE+ M P
Sbjct: 109 YLFQGGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMPP 168
Query: 424 SVLDTIIPMLDHHSAVDEVDYRNTIFIFISNIGGHEIATKLLELYEKGVTRSEVEFRDFE 603
+++ + P L V +YR IFIFISN GG +I LE + R E+ ++ E
Sbjct: 169 GLMEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGKQINQVALEAWRSRRDREEILLQELE 228
Query: 604 PIIRRTAYF--QGGFEKAAAIAHHLIDHYVPFLPL 702
P+I R GF + + L+D VPFLPL
Sbjct: 229 PVISRAVLDNPHHGFSNSGIMEERLLDAVVPFLPL 263
>CR457354-1|CAG33635.1| 397|Homo sapiens TOR3A protein.
Length = 397
Score = 116 bits (278), Expect = 1e-25
Identities = 67/212 (31%), Positives = 115/212 (54%), Gaps = 4/212 (1%)
Frame = +1
Query: 79 LSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAEAIYR 258
L+ R+ GQ LV +L + E+ +KAL +S HGWSG GKNF + M+ E +YR
Sbjct: 130 LNVRLHGQHLVQQL---VLRTVRGYLETPQPEKALALSFHGWSGTGKNFVARMLVENLYR 186
Query: 259 KGMQSNYVKLFMGKKDFDCYE-LEKKKQMLVNTLNTLVKKCPKSLIIFDEIHHMCPSVLD 435
G+ S+ V++F+ F + ++ K+ L++ + + C ++L IFDE + P +L+
Sbjct: 187 DGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFDEAEKLHPGLLE 246
Query: 436 TIIPMLDHHSAV-DEVDYRNTIFIFISNIGGHEIATKLLELYEKGVTRSEVEFRDFEPII 612
+ P L+ + + TIF+F+SN+ G I +L+L + G +R E+ EP +
Sbjct: 247 VLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKAGWSREEITMEHLEPHL 306
Query: 613 RR--TAYFQGGFEKAAAIAHHLIDHYVPFLPL 702
+ GF + + +LID+++PFLPL
Sbjct: 307 QAEIVETIDNGFGHSRLVKENLIDYFIPFLPL 338
>BC011746-1|AAH11746.1| 397|Homo sapiens torsin family 3, member A
protein.
Length = 397
Score = 116 bits (278), Expect = 1e-25
Identities = 67/212 (31%), Positives = 115/212 (54%), Gaps = 4/212 (1%)
Frame = +1
Query: 79 LSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAEAIYR 258
L+ R+ GQ LV +L + E+ +KAL +S HGWSG GKNF + M+ E +YR
Sbjct: 130 LNVRLHGQHLVQQL---VLRTVRGYLETPQPEKALALSFHGWSGTGKNFVARMLVENLYR 186
Query: 259 KGMQSNYVKLFMGKKDFDCYE-LEKKKQMLVNTLNTLVKKCPKSLIIFDEIHHMCPSVLD 435
G+ S+ V++F+ F + ++ K+ L++ + + C ++L IFDE + P +L+
Sbjct: 187 DGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFDEAEKLHPGLLE 246
Query: 436 TIIPMLDHHSAV-DEVDYRNTIFIFISNIGGHEIATKLLELYEKGVTRSEVEFRDFEPII 612
+ P L+ + + TIF+F+SN+ G I +L+L + G +R E+ EP +
Sbjct: 247 VLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKAGWSREEITMEHLEPHL 306
Query: 613 RR--TAYFQGGFEKAAAIAHHLIDHYVPFLPL 702
+ GF + + +LID+++PFLPL
Sbjct: 307 QAEIVETIDNGFGHSRLVKENLIDYFIPFLPL 338
>BC007571-1|AAH07571.1| 397|Homo sapiens torsin family 3, member A
protein.
Length = 397
Score = 116 bits (278), Expect = 1e-25
Identities = 67/212 (31%), Positives = 115/212 (54%), Gaps = 4/212 (1%)
Frame = +1
Query: 79 LSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAEAIYR 258
L+ R+ GQ LV +L + E+ +KAL +S HGWSG GKNF + M+ E +YR
Sbjct: 130 LNVRLHGQHLVQQL---VLRTVRGYLETPQPEKALALSFHGWSGTGKNFVARMLVENLYR 186
Query: 259 KGMQSNYVKLFMGKKDFDCYE-LEKKKQMLVNTLNTLVKKCPKSLIIFDEIHHMCPSVLD 435
G+ S+ V++F+ F + ++ K+ L++ + + C ++L IFDE + P +L+
Sbjct: 187 DGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFDEAEKLHPGLLE 246
Query: 436 TIIPMLDHHSAV-DEVDYRNTIFIFISNIGGHEIATKLLELYEKGVTRSEVEFRDFEPII 612
+ P L+ + + TIF+F+SN+ G I +L+L + G +R E+ EP +
Sbjct: 247 VLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKAGWSREEITMEHLEPHL 306
Query: 613 RR--TAYFQGGFEKAAAIAHHLIDHYVPFLPL 702
+ GF + + +LID+++PFLPL
Sbjct: 307 QAEIVETIDNGFGHSRLVKENLIDYFIPFLPL 338
>BC001085-1|AAH01085.1| 397|Homo sapiens torsin family 3, member A
protein.
Length = 397
Score = 116 bits (278), Expect = 1e-25
Identities = 67/212 (31%), Positives = 115/212 (54%), Gaps = 4/212 (1%)
Frame = +1
Query: 79 LSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAEAIYR 258
L+ R+ GQ LV +L + E+ +KAL +S HGWSG GKNF + M+ E +YR
Sbjct: 130 LNVRLHGQHLVQQL---VLRTVRGYLETPQPEKALALSFHGWSGTGKNFVARMLVENLYR 186
Query: 259 KGMQSNYVKLFMGKKDFDCYE-LEKKKQMLVNTLNTLVKKCPKSLIIFDEIHHMCPSVLD 435
G+ S+ V++F+ F + ++ K+ L++ + + C ++L IFDE + P +L+
Sbjct: 187 DGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFDEAEKLHPGLLE 246
Query: 436 TIIPMLDHHSAV-DEVDYRNTIFIFISNIGGHEIATKLLELYEKGVTRSEVEFRDFEPII 612
+ P L+ + + TIF+F+SN+ G I +L+L + G +R E+ EP +
Sbjct: 247 VLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKAGWSREEITMEHLEPHL 306
Query: 613 RR--TAYFQGGFEKAAAIAHHLIDHYVPFLPL 702
+ GF + + +LID+++PFLPL
Sbjct: 307 QAEIVETIDNGFGHSRLVKENLIDYFIPFLPL 338
>AL139132-7|CAH70928.1| 397|Homo sapiens torsin family 3, member A
protein.
Length = 397
Score = 116 bits (278), Expect = 1e-25
Identities = 67/212 (31%), Positives = 115/212 (54%), Gaps = 4/212 (1%)
Frame = +1
Query: 79 LSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAEAIYR 258
L+ R+ GQ LV +L + E+ +KAL +S HGWSG GKNF + M+ E +YR
Sbjct: 130 LNVRLHGQHLVQQL---VLRTVRGYLETPQPEKALALSFHGWSGTGKNFVARMLVENLYR 186
Query: 259 KGMQSNYVKLFMGKKDFDCYE-LEKKKQMLVNTLNTLVKKCPKSLIIFDEIHHMCPSVLD 435
G+ S+ V++F+ F + ++ K+ L++ + + C ++L IFDE + P +L+
Sbjct: 187 DGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFDEAEKLHPGLLE 246
Query: 436 TIIPMLDHHSAV-DEVDYRNTIFIFISNIGGHEIATKLLELYEKGVTRSEVEFRDFEPII 612
+ P L+ + + TIF+F+SN+ G I +L+L + G +R E+ EP +
Sbjct: 247 VLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKAGWSREEITMEHLEPHL 306
Query: 613 RR--TAYFQGGFEKAAAIAHHLIDHYVPFLPL 702
+ GF + + +LID+++PFLPL
Sbjct: 307 QAEIVETIDNGFGHSRLVKENLIDYFIPFLPL 338
>AK025998-1|BAB15312.1| 397|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22345 fis, clone HRC06114. ).
Length = 397
Score = 116 bits (278), Expect = 1e-25
Identities = 67/212 (31%), Positives = 115/212 (54%), Gaps = 4/212 (1%)
Frame = +1
Query: 79 LSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAEAIYR 258
L+ R+ GQ LV +L + E+ +KAL +S HGWSG GKNF + M+ E +YR
Sbjct: 130 LNVRLHGQHLVQQL---VLRTVRGYLETPQPEKALALSFHGWSGTGKNFVARMLVENLYR 186
Query: 259 KGMQSNYVKLFMGKKDFDCYE-LEKKKQMLVNTLNTLVKKCPKSLIIFDEIHHMCPSVLD 435
G+ S+ V++F+ F + ++ K+ L++ + + C ++L IFDE + P +L+
Sbjct: 187 DGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFDEAEKLHPGLLE 246
Query: 436 TIIPMLDHHSAV-DEVDYRNTIFIFISNIGGHEIATKLLELYEKGVTRSEVEFRDFEPII 612
+ P L+ + + TIF+F+SN+ G I +L+L + G +R E+ EP +
Sbjct: 247 VLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKAGWSREEITMEHLEPHL 306
Query: 613 RR--TAYFQGGFEKAAAIAHHLIDHYVPFLPL 702
+ GF + + +LID+++PFLPL
Sbjct: 307 QAEIVETIDNGFGHSRLVKENLIDYFIPFLPL 338
>AJ318044-1|CAC88129.1| 397|Homo sapiens ADIR1 protein.
Length = 397
Score = 116 bits (278), Expect = 1e-25
Identities = 67/212 (31%), Positives = 115/212 (54%), Gaps = 4/212 (1%)
Frame = +1
Query: 79 LSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAEAIYR 258
L+ R+ GQ LV +L + E+ +KAL +S HGWSG GKNF + M+ E +YR
Sbjct: 130 LNVRLHGQHLVQQL---VLRTVRGYLETPQPEKALALSFHGWSGTGKNFVARMLVENLYR 186
Query: 259 KGMQSNYVKLFMGKKDFDCYE-LEKKKQMLVNTLNTLVKKCPKSLIIFDEIHHMCPSVLD 435
G+ S+ V++F+ F + ++ K+ L++ + + C ++L IFDE + P +L+
Sbjct: 187 DGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFDEAEKLHPGLLE 246
Query: 436 TIIPMLDHHSAV-DEVDYRNTIFIFISNIGGHEIATKLLELYEKGVTRSEVEFRDFEPII 612
+ P L+ + + TIF+F+SN+ G I +L+L + G +R E+ EP +
Sbjct: 247 VLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKAGWSREEITMEHLEPHL 306
Query: 613 RR--TAYFQGGFEKAAAIAHHLIDHYVPFLPL 702
+ GF + + +LID+++PFLPL
Sbjct: 307 QAEIVETIDNGFGHSRLVKENLIDYFIPFLPL 338
>AJ299403-1|CAC13973.1| 397|Homo sapiens ADIR1 protein.
Length = 397
Score = 116 bits (278), Expect = 1e-25
Identities = 67/212 (31%), Positives = 115/212 (54%), Gaps = 4/212 (1%)
Frame = +1
Query: 79 LSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAEAIYR 258
L+ R+ GQ LV +L + E+ +KAL +S HGWSG GKNF + M+ E +YR
Sbjct: 130 LNVRLHGQHLVQQL---VLRTVRGYLETPQPEKALALSFHGWSGTGKNFVARMLVENLYR 186
Query: 259 KGMQSNYVKLFMGKKDFDCYE-LEKKKQMLVNTLNTLVKKCPKSLIIFDEIHHMCPSVLD 435
G+ S+ V++F+ F + ++ K+ L++ + + C ++L IFDE + P +L+
Sbjct: 187 DGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFDEAEKLHPGLLE 246
Query: 436 TIIPMLDHHSAV-DEVDYRNTIFIFISNIGGHEIATKLLELYEKGVTRSEVEFRDFEPII 612
+ P L+ + + TIF+F+SN+ G I +L+L + G +R E+ EP +
Sbjct: 247 VLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKAGWSREEITMEHLEPHL 306
Query: 613 RR--TAYFQGGFEKAAAIAHHLIDHYVPFLPL 702
+ GF + + +LID+++PFLPL
Sbjct: 307 QAEIVETIDNGFGHSRLVKENLIDYFIPFLPL 338
>BC018292-1|AAH18292.1| 397|Homo sapiens torsin family 3, member A
protein.
Length = 397
Score = 113 bits (273), Expect = 4e-25
Identities = 67/212 (31%), Positives = 114/212 (53%), Gaps = 4/212 (1%)
Frame = +1
Query: 79 LSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAEAIYR 258
L+ R+ GQ LV +L + E+ +KAL +S HGWSG GKNF + M+ E +YR
Sbjct: 130 LNVRLHGQHLVQQL---VLRTVRGYLETPQPEKALALSFHGWSGTGKNFVARMLVENLYR 186
Query: 259 KGMQSNYVKLFMGKKDFDCYE-LEKKKQMLVNTLNTLVKKCPKSLIIFDEIHHMCPSVLD 435
G+ S+ V++F+ F + ++ K+ L++ + + C ++L IFDE + P +L+
Sbjct: 187 DGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFDEAEKLHPGLLE 246
Query: 436 TIIPMLDHHSAV-DEVDYRNTIFIFISNIGGHEIATKLLELYEKGVTRSEVEFRDFEPII 612
+ P L+ + + TIF+F SN+ G I +L+L + G +R E+ EP +
Sbjct: 247 VLGPHLERRAPEGHRAESPWTIFLFPSNLRGDIINEVVLKLLKAGWSREEITMEHLEPHL 306
Query: 613 RR--TAYFQGGFEKAAAIAHHLIDHYVPFLPL 702
+ GF + + +LID+++PFLPL
Sbjct: 307 QAEIVETIDNGFGHSRLVKENLIDYFIPFLPL 338
>AL139132-8|CAH70929.1| 336|Homo sapiens torsin family 3, member A
protein.
Length = 336
Score = 98.3 bits (234), Expect = 2e-20
Identities = 57/178 (32%), Positives = 97/178 (54%), Gaps = 2/178 (1%)
Frame = +1
Query: 79 LSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAEAIYR 258
L+ R+ GQ LV +L + E+ +KAL +S HGWSG GKNF + M+ E +YR
Sbjct: 130 LNVRLHGQHLVQQL---VLRTVRGYLETPQPEKALALSFHGWSGTGKNFVARMLVENLYR 186
Query: 259 KGMQSNYVKLFMGKKDFDCYE-LEKKKQMLVNTLNTLVKKCPKSLIIFDEIHHMCPSVLD 435
G+ S+ V++F+ F + ++ K+ L++ + + C ++L IFDE + P +L+
Sbjct: 187 DGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFDEAEKLHPGLLE 246
Query: 436 TIIPMLDHHSAV-DEVDYRNTIFIFISNIGGHEIATKLLELYEKGVTRSEVEFRDFEP 606
+ P L+ + + TIF+F+SN+ G I +L+L + G +R E+ EP
Sbjct: 247 VLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKAGWSREEITMEHLEP 304
>AJ318044-2|CAC88130.1| 336|Homo sapiens ADIR2 protein.
Length = 336
Score = 98.3 bits (234), Expect = 2e-20
Identities = 57/178 (32%), Positives = 97/178 (54%), Gaps = 2/178 (1%)
Frame = +1
Query: 79 LSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAEAIYR 258
L+ R+ GQ LV +L + E+ +KAL +S HGWSG GKNF + M+ E +YR
Sbjct: 130 LNVRLHGQHLVQQL---VLRTVRGYLETPQPEKALALSFHGWSGTGKNFVARMLVENLYR 186
Query: 259 KGMQSNYVKLFMGKKDFDCYE-LEKKKQMLVNTLNTLVKKCPKSLIIFDEIHHMCPSVLD 435
G+ S+ V++F+ F + ++ K+ L++ + + C ++L IFDE + P +L+
Sbjct: 187 DGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFDEAEKLHPGLLE 246
Query: 436 TIIPMLDHHSAV-DEVDYRNTIFIFISNIGGHEIATKLLELYEKGVTRSEVEFRDFEP 606
+ P L+ + + TIF+F+SN+ G I +L+L + G +R E+ EP
Sbjct: 247 VLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKAGWSREEITMEHLEP 304
>AJ299441-1|CAC14461.1| 336|Homo sapiens ADIR2 protein.
Length = 336
Score = 98.3 bits (234), Expect = 2e-20
Identities = 57/178 (32%), Positives = 97/178 (54%), Gaps = 2/178 (1%)
Frame = +1
Query: 79 LSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAEAIYR 258
L+ R+ GQ LV +L + E+ +KAL +S HGWSG GKNF + M+ E +YR
Sbjct: 130 LNVRLHGQHLVQQL---VLRTVRGYLETPQPEKALALSFHGWSGTGKNFVARMLVENLYR 186
Query: 259 KGMQSNYVKLFMGKKDFDCYE-LEKKKQMLVNTLNTLVKKCPKSLIIFDEIHHMCPSVLD 435
G+ S+ V++F+ F + ++ K+ L++ + + C ++L IFDE + P +L+
Sbjct: 187 DGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFDEAEKLHPGLLE 246
Query: 436 TIIPMLDHHSAV-DEVDYRNTIFIFISNIGGHEIATKLLELYEKGVTRSEVEFRDFEP 606
+ P L+ + + TIF+F+SN+ G I +L+L + G +R E+ EP
Sbjct: 247 VLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLKLLKAGWSREEITMEHLEP 304
>AL139132-9|CAH70930.1| 174|Homo sapiens torsin family 3, member A
protein.
Length = 174
Score = 86.2 bits (204), Expect = 1e-16
Identities = 50/160 (31%), Positives = 87/160 (54%), Gaps = 2/160 (1%)
Frame = +1
Query: 52 YIRYELRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFAS 231
++ L L+ R+ GQ LV +L + E+ +KAL +S HGWSG GKNF +
Sbjct: 13 FLSLGLEWDLNVRLHGQHLVQQL---VLRTVRGYLETPQPEKALALSFHGWSGTGKNFVA 69
Query: 232 TMIAEAIYRKGMQSNYVKLFMGKKDFDCYE-LEKKKQMLVNTLNTLVKKCPKSLIIFDEI 408
M+ E +YR G+ S+ V++F+ F + ++ K+ L++ + + C ++L IFDE
Sbjct: 70 RMLVENLYRDGLMSDCVRMFIATFHFPHPKYVDLYKEQLMSQIRETQQLCHQTLFIFDEA 129
Query: 409 HHMCPSVLDTIIPMLDHHSAV-DEVDYRNTIFIFISNIGG 525
+ P +L+ + P L+ + + TIF+F+SN+ G
Sbjct: 130 EKLHPGLLEVLGPHLERRAPEGHRAESPWTIFLFLSNLRG 169
>AL162426-12|CAI41187.1| 253|Homo sapiens torsin family 2, member A
protein.
Length = 253
Score = 79.4 bits (187), Expect = 1e-14
Identities = 48/149 (32%), Positives = 80/149 (53%), Gaps = 1/149 (0%)
Frame = +1
Query: 67 LRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAE 246
L L+Q + GQ L L ++ A K + + K LV+SLHGW+G GK++ S+++A
Sbjct: 52 LECDLAQHLAGQHLAKAL--VVKALKAFVRDP-APTKPLVLSLHGWTGTGKSYVSSLLAH 108
Query: 247 AIYRKGMQSNYVKLFMGKKDF-DCYELEKKKQMLVNTLNTLVKKCPKSLIIFDEIHHMCP 423
+++ G++S V F F +E+ K+ L + + + C +SL +FDE+ M P
Sbjct: 109 YLFQGGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMPP 168
Query: 424 SVLDTIIPMLDHHSAVDEVDYRNTIFIFI 510
+++ + P L V +YR IFIFI
Sbjct: 169 GLMEVLRPFLGSSWVVYGTNYRKAIFIFI 197
>AL162426-10|CAI41185.1| 242|Homo sapiens torsin family 2, member A
protein.
Length = 242
Score = 79.4 bits (187), Expect = 1e-14
Identities = 48/149 (32%), Positives = 80/149 (53%), Gaps = 1/149 (0%)
Frame = +1
Query: 67 LRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAE 246
L L+Q + GQ L L ++ A K + + K LV+SLHGW+G GK++ S+++A
Sbjct: 52 LECDLAQHLAGQHLAKAL--VVKALKAFVRDP-APTKPLVLSLHGWTGTGKSYVSSLLAH 108
Query: 247 AIYRKGMQSNYVKLFMGKKDF-DCYELEKKKQMLVNTLNTLVKKCPKSLIIFDEIHHMCP 423
+++ G++S V F F +E+ K+ L + + + C +SL +FDE+ M P
Sbjct: 109 YLFQGGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMPP 168
Query: 424 SVLDTIIPMLDHHSAVDEVDYRNTIFIFI 510
+++ + P L V +YR IFIFI
Sbjct: 169 GLMEVLRPFLGSSWVVYGTNYRKAIFIFI 197
>AK075520-1|BAC11667.1| 242|Homo sapiens protein ( Homo sapiens
cDNA PSEC0218 fis, clone HEMBA1005096, highly similar to
Torsin family 2, member A. ).
Length = 242
Score = 79.4 bits (187), Expect = 1e-14
Identities = 48/149 (32%), Positives = 80/149 (53%), Gaps = 1/149 (0%)
Frame = +1
Query: 67 LRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAE 246
L L+Q + GQ L L ++ A K + + K LV+SLHGW+G GK++ S+++A
Sbjct: 52 LECDLAQHLAGQHLAKAL--VVKALKAFVRDP-APTKPLVLSLHGWTGTGKSYVSSLLAH 108
Query: 247 AIYRKGMQSNYVKLFMGKKDF-DCYELEKKKQMLVNTLNTLVKKCPKSLIIFDEIHHMCP 423
+++ G++S V F F +E+ K+ L + + + C +SL +FDE+ M P
Sbjct: 109 YLFQGGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMPP 168
Query: 424 SVLDTIIPMLDHHSAVDEVDYRNTIFIFI 510
+++ + P L V +YR IFIFI
Sbjct: 169 GLMEVLRPFLGSSWVVYGTNYRKAIFIFI 197
>AK027677-1|BAB55288.1| 253|Homo sapiens protein ( Homo sapiens
cDNA FLJ14771 fis, clone NT2RP3004282, weakly similar to
Homo sapiens torsinA (DYT1) mRNA. ).
Length = 253
Score = 79.4 bits (187), Expect = 1e-14
Identities = 48/149 (32%), Positives = 80/149 (53%), Gaps = 1/149 (0%)
Frame = +1
Query: 67 LRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIAE 246
L L+Q + GQ L L ++ A K + + K LV+SLHGW+G GK++ S+++A
Sbjct: 52 LECDLAQHLAGQHLAKAL--VVKALKAFVRDP-APTKPLVLSLHGWTGTGKSYVSSLLAH 108
Query: 247 AIYRKGMQSNYVKLFMGKKDF-DCYELEKKKQMLVNTLNTLVKKCPKSLIIFDEIHHMCP 423
+++ G++S V F F +E+ K+ L + + + C +SL +FDE+ M P
Sbjct: 109 YLFQGGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMPP 168
Query: 424 SVLDTIIPMLDHHSAVDEVDYRNTIFIFI 510
+++ + P L V +YR IFIFI
Sbjct: 169 GLMEVLRPFLGSSWVVYGTNYRKAIFIFI 197
>BC062340-1|AAH62340.1| 247|Homo sapiens TOR2A protein protein.
Length = 247
Score = 78.2 bits (184), Expect = 3e-14
Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Frame = +1
Query: 376 CPKSLIIFDEIHHMCPSVLDTIIPMLDHHSAVDEVDYRNTIFIFISNIGGHEIATKLLEL 555
C +SL +FDE+ M P +++ + P L V +YR IFIFISN GG +I LE
Sbjct: 79 CGRSLFLFDEMDKMPPGLMEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGEQINQVALEA 138
Query: 556 YEKGVTRSEVEFRDFEPIIRRTAYF--QGGFEKAAAIAHHLIDHYVPFLPL 702
+ R E+ ++ EP+I R GF + + L+D VPFLPL
Sbjct: 139 WRSRRDREEILLQELEPVISRAVLDNPHHGFSNSGIMEERLLDAVVPFLPL 189
>AL158207-2|CAC88166.1| 140|Homo sapiens torsin family 1, member B
(torsin B) protein.
Length = 140
Score = 70.1 bits (164), Expect = 7e-12
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = +1
Query: 67 LRDSLSQRMFGQPLVNE-LFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTMIA 243
L+ L +++FGQ L E +F ++ + N N KK L +SLHGW+G GKNF S ++A
Sbjct: 49 LKLDLEEKLFGQHLATEVIFKALTGFRNNKNP----KKPLTLSLHGWAGTGKNFVSQIVA 104
Query: 244 EAIYRKGMQSNYVKLFMGKKDF 309
E ++ KG++SN+V LF+ F
Sbjct: 105 ENLHPKGLKSNFVHLFVSTLHF 126
>BC014484-1|AAH14484.1| 197|Homo sapiens TOR1A protein protein.
Length = 197
Score = 66.5 bits (155), Expect = 9e-11
Identities = 37/84 (44%), Positives = 49/84 (58%)
Frame = +1
Query: 58 RYELRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTM 237
R L+ L +FGQ L ++ I++A IN KK L +SLHGW+G GKNF S +
Sbjct: 58 REALQKDLDDNLFGQHLAKKI--ILNAVFGFINNPKP-KKPLTLSLHGWTGTGKNFVSKI 114
Query: 238 IAEAIYRKGMQSNYVKLFMGKKDF 309
IAE IY G+ S+YV LF+ F
Sbjct: 115 IAENIYEGGLNSDYVHLFVATLHF 138
>BC088368-1|AAH88368.1| 181|Homo sapiens TOR3A protein protein.
Length = 181
Score = 64.5 bits (150), Expect = 4e-10
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Frame = +1
Query: 376 CPKSLIIFDEIHHMCPSVLDTIIPMLDHHSAVDE-VDYRNTIFIFISNIGGHEIATKLLE 552
C ++L IFDE + P +L+ + P L+ + + TIF+F+SN+ G I +L+
Sbjct: 11 CHQTLFIFDEAEKLHPGLLEVLGPHLERRAPEGHRAESPWTIFLFLSNLRGDIINEVVLK 70
Query: 553 LYEKGVTRSEVEFRDFEPIIRR--TAYFQGGFEKAAAIAHHLIDHYVPFLPL 702
L + G +R E+ EP ++ GF + + +LID+++PFLPL
Sbjct: 71 LLKAGWSREEITMEHLEPHLQAEIVETIDNGFGHSRLVKENLIDYFIPFLPL 122
>BC006404-1|AAH06404.1| 707|Homo sapiens ClpB caseinolytic
peptidase B homolog (E. coli) protein.
Length = 707
Score = 52.8 bits (121), Expect = 1e-06
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 12/186 (6%)
Frame = +1
Query: 58 RYELRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTM 237
R+ L L + + GQ + + + +A + N + LV G SG+GK +
Sbjct: 336 RFPLEQRLKEHIIGQE--SAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQ 393
Query: 238 IAEAIYRKGMQSNYVKLFMGKKDFDCYELEK---KKQMLVN-----TLNTLVKKCPKSLI 393
A+ ++ K + +++L M + + +E+ K V L +K+CP +++
Sbjct: 394 TAKYMH-KDAKKGFIRLDMSEFQ-ERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVV 451
Query: 394 IFDEIHHMCPSVLDTIIPMLDHHSAVD----EVDYRNTIFIFISNIGGHEIATKLLELYE 561
+FDE+ P VL ++ + D D +D ++ IFI SN+ EIA L+L +
Sbjct: 452 LFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQ 511
Query: 562 KGVTRS 579
+ + S
Sbjct: 512 EALEMS 517
>AK023214-1|BAB14467.1| 677|Homo sapiens protein ( Homo sapiens
cDNA FLJ13152 fis, clone NT2RP3003385, highly similar to
Mus musculus SKD3 mRNA. ).
Length = 677
Score = 52.8 bits (121), Expect = 1e-06
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 12/186 (6%)
Frame = +1
Query: 58 RYELRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFASTM 237
R+ L L + + GQ + + + +A + N + LV G SG+GK +
Sbjct: 306 RFPLEQRLKEHIIGQE--SAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQ 363
Query: 238 IAEAIYRKGMQSNYVKLFMGKKDFDCYELEK---KKQMLVN-----TLNTLVKKCPKSLI 393
A+ ++ K + +++L M + + +E+ K V L +K+CP +++
Sbjct: 364 TAKYMH-KDAKKGFIRLDMSEFQ-ERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVV 421
Query: 394 IFDEIHHMCPSVLDTIIPMLDHHSAVD----EVDYRNTIFIFISNIGGHEIATKLLELYE 561
+FDE+ P VL ++ + D D +D ++ IFI SN+ EIA L+L +
Sbjct: 422 LFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQ 481
Query: 562 KGVTRS 579
+ + S
Sbjct: 482 EALEMS 487
>AK092388-1|BAC03876.1| 136|Homo sapiens protein ( Homo sapiens
cDNA FLJ35069 fis, clone PLACE5000129. ).
Length = 136
Score = 50.4 bits (115), Expect = 6e-06
Identities = 27/83 (32%), Positives = 47/83 (56%)
Frame = +1
Query: 43 YHRYIRYELRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKN 222
+H + L L+Q + GQ L L ++ A K + + K LV+SLHGW+G GK+
Sbjct: 35 HHPPVALGLECDLAQHLAGQHLAKAL--VVKALKAFVRDP-APTKPLVLSLHGWTGTGKS 91
Query: 223 FASTMIAEAIYRKGMQSNYVKLF 291
+ S+++A +++ G++S V F
Sbjct: 92 YVSSLLAHYLFQGGLRSPRVHHF 114
>BC006257-1|AAH06257.1| 315|Homo sapiens CLPB protein protein.
Length = 315
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Frame = +1
Query: 355 LNTLVKKCPKSLIIFDEIHHMCPSVLDTIIPMLDHHSAVD----EVDYRNTIFIFISNIG 522
L +K+CP ++++FDE+ P VL ++ + D D +D ++ IFI SN+
Sbjct: 47 LTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVA 106
Query: 523 GHEIATKLLELYEKGVTRS 579
EIA L+L ++ + S
Sbjct: 107 SDEIAQHALQLRQEALEMS 125
>AL834484-1|CAD39142.1| 322|Homo sapiens hypothetical protein
protein.
Length = 322
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Frame = +1
Query: 355 LNTLVKKCPKSLIIFDEIHHMCPSVLDTIIPMLDHHSAVD----EVDYRNTIFIFISNIG 522
L +K+CP ++++FDE+ P VL ++ + D D +D ++ IFI SN+
Sbjct: 54 LTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVA 113
Query: 523 GHEIATKLLELYEKGVTRS 579
EIA L+L ++ + S
Sbjct: 114 SDEIAQHALQLRQEALEMS 132
>BX255925-5|CAM24150.1| 423|Homo sapiens novel protein (FLJ20245)
protein.
Length = 423
Score = 40.7 bits (91), Expect = 0.005
Identities = 43/193 (22%), Positives = 87/193 (45%), Gaps = 8/193 (4%)
Frame = +1
Query: 49 RYIRYELRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFA 228
RY L +L + +FGQP + I++ ++ + ++ + + L+++LHG SGVGK+
Sbjct: 147 RYDLDGLEKALQRAVFGQPAA--VSRIVALMRDYL-ATHVHSRPLLLALHGPSGVGKSHV 203
Query: 229 STMIAEAIYRKGMQSNYVKLFMGKKDF--------DCYELEKKKQMLVNTLNTLVKKCPK 384
++A +R ++ + + L + DC E ++ V +K P
Sbjct: 204 GRLLARH-FRSVLEDSALVLQYHARHHCPEARAAQDCREELARRVADVVARAEAEEKTP- 261
Query: 385 SLIIFDEIHHMCPSVLDTIIPMLDHHSAVDEVDYRNTIFIFISNIGGHEIATKLLELYEK 564
L++ D++ M +LD + L + + N I++ +S GG E+ +L+ +
Sbjct: 262 -LLVLDDVELMPRPLLDELHGFLQPQRS---HHFHNAIYVLLSGAGGAEVTRFVLQNASR 317
Query: 565 GVTRSEVEFRDFE 603
+ FR E
Sbjct: 318 ALPLRPDGFRSAE 330
>AK000252-1|BAA91032.1| 423|Homo sapiens protein ( Homo sapiens
cDNA FLJ20245 fis, clone COLF6454. ).
Length = 423
Score = 40.7 bits (91), Expect = 0.005
Identities = 43/193 (22%), Positives = 87/193 (45%), Gaps = 8/193 (4%)
Frame = +1
Query: 49 RYIRYELRDSLSQRMFGQPLVNELFNIISAHKENINESNGNKKALVISLHGWSGVGKNFA 228
RY L +L + +FGQP + I++ ++ + ++ + + L+++LHG SGVGK+
Sbjct: 147 RYDLDGLEKALQRAVFGQPAA--VSRIVALMRDYL-ATHVHSRPLLLALHGPSGVGKSHV 203
Query: 229 STMIAEAIYRKGMQSNYVKLFMGKKDF--------DCYELEKKKQMLVNTLNTLVKKCPK 384
++A +R ++ + + L + DC E ++ V +K P
Sbjct: 204 GRLLARH-FRSVLEDSALVLQYHARHHCPEARAAQDCREELARRVADVVARAEAEEKTP- 261
Query: 385 SLIIFDEIHHMCPSVLDTIIPMLDHHSAVDEVDYRNTIFIFISNIGGHEIATKLLELYEK 564
L++ D++ M +LD + L + + N I++ +S GG E+ +L+ +
Sbjct: 262 -LLVLDDVELMPRPLLDELHGFLQPQRS---HHFHNAIYVLLSGAGGAEVTRFVLQNASR 317
Query: 565 GVTRSEVEFRDFE 603
+ FR E
Sbjct: 318 ALPLRPDGFRSAE 330
>BC100910-1|AAI00911.1| 169|Homo sapiens TOR2A protein protein.
Length = 169
Score = 39.9 bits (89), Expect = 0.009
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +1
Query: 376 CPKSLIIFDEIHHMCPSVLDTIIPMLDHHSAVDEVDYRNTIFIFI 510
C +SL +FDE+ M P +++ + P L V +YR IFIFI
Sbjct: 69 CGRSLFLFDEMDKMPPGLMEVLRPFLGSSWVVYGTNYRKAIFIFI 113
>BC100909-1|AAI00910.1| 167|Homo sapiens TOR2A protein protein.
Length = 167
Score = 39.9 bits (89), Expect = 0.009
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +1
Query: 376 CPKSLIIFDEIHHMCPSVLDTIIPMLDHHSAVDEVDYRNTIFIFI 510
C +SL +FDE+ M P +++ + P L V +YR IFIFI
Sbjct: 67 CGRSLFLFDEMDKMPPGLMEVLRPFLGSSWVVYGTNYRKAIFIFI 111
>BC100908-1|AAI00909.1| 169|Homo sapiens TOR2A protein protein.
Length = 169
Score = 39.9 bits (89), Expect = 0.009
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +1
Query: 376 CPKSLIIFDEIHHMCPSVLDTIIPMLDHHSAVDEVDYRNTIFIFI 510
C +SL +FDE+ M P +++ + P L V +YR IFIFI
Sbjct: 69 CGRSLFLFDEMDKMPPGLMEVLRPFLGSSWVVYGTNYRKAIFIFI 113
>BC100907-1|AAI00908.1| 169|Homo sapiens TOR2A protein protein.
Length = 169
Score = 39.9 bits (89), Expect = 0.009
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +1
Query: 376 CPKSLIIFDEIHHMCPSVLDTIIPMLDHHSAVDEVDYRNTIFIFI 510
C +SL +FDE+ M P +++ + P L V +YR IFIFI
Sbjct: 69 CGRSLFLFDEMDKMPPGLMEVLRPFLGSSWVVYGTNYRKAIFIFI 113
>AL139132-6|CAH70927.1| 153|Homo sapiens torsin family 3, member A
protein.
Length = 153
Score = 33.1 bits (72), Expect = 0.99
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +1
Query: 214 GKNFASTMIAEAIYRKGMQSNYVKLFM 294
GKNF + M+ E +YR G+ S+ V++F+
Sbjct: 125 GKNFVARMLVENLYRDGLMSDCVRMFI 151
>BC005038-1|AAH05038.1| 789|Homo sapiens CHD1L protein protein.
Length = 789
Score = 30.3 bits (65), Expect = 7.0
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +1
Query: 265 MQSNYVKLFMGKKDFDCYELEKKKQMLVNTLNTLVKKCPKSLIIFDEIHHMCPSVLDTII 444
+Q Y K + KD D +E E K++ + + + ++KC +FD M + DT+I
Sbjct: 271 LQKKYYKAIL-MKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGGVGMNLTAADTVI 329
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,814,279
Number of Sequences: 237096
Number of extensions: 2015950
Number of successful extensions: 4697
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 4399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4647
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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