Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22g22
         (592 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0200 - 21911260-21911322,21911655-21911705,21911756-219118...    30   1.6  
05_03_0443 + 14057080-14057201,14058566-14058698,14058758-140587...    28   4.8  
07_03_1204 + 24855052-24855210,24855411-24855974,24856157-248562...    28   6.4  
07_03_0536 - 19205515-19205686,19205807-19205931,19206428-192065...    28   6.4  
01_04_0106 + 16068729-16070651                                         27   8.5  

>03_05_0200 -
           21911260-21911322,21911655-21911705,21911756-21911851,
           21911947-21912045,21913213-21913526,21913621-21913696,
           21913788-21915136,21915344-21915944
          Length = 882

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +3

Query: 462 CEVKIEPEDVEVKEVVAENTPEVNDFYNETAEF--PELQAQGCEE 590
           CE+K E ED+   E V  ++P  + F +  AE     ++  GC++
Sbjct: 236 CEIKTEDEDIYSDEQVGVSSPGKDSFQDSFAELHREPIEYDGCQQ 280


>05_03_0443 +
           14057080-14057201,14058566-14058698,14058758-14058797,
           14059175-14059398,14059904-14059976,14060364-14060614,
           14060892-14061060,14061307-14061611,14062023-14062209,
           14062311-14062464,14063186-14063248,14063337-14063433,
           14063530-14063619
          Length = 635

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 14/37 (37%), Positives = 25/37 (67%)
 Frame = +2

Query: 161 ISNKKTMHLLKELDSSKSAEALCFYCLSTERTLICLS 271
           I+NK++ ++L++LD+ +    L    +STE TL CL+
Sbjct: 153 ITNKQS-NILEDLDTLRLLSKLALRAVSTEATLWCLA 188


>07_03_1204 +
           24855052-24855210,24855411-24855974,24856157-24856225,
           24856304-24856426,24856733-24856864,24857143-24857266,
           24857547-24857614,24857849-24857991,24858615-24858722,
           24858826-24858901,24859442-24859578,24859660-24859819,
           24859901-24860080,24860159-24860275,24860540-24860695,
           24861209-24861379,24861479-24861591,24861669-24861792,
           24861961-24862056,24862139-24862201,24862299-24862364
          Length = 982

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 371 TDLFLKRVEQCCSILQGKHPPAIF 442
           T L L+R+++ CS + G HP  IF
Sbjct: 377 TALILRRLKRICSNIYGSHPTFIF 400


>07_03_0536 -
           19205515-19205686,19205807-19205931,19206428-19206554,
           19206653-19206777,19207616-19207708,19207779-19208052,
           19208138-19208269,19208391-19208470,19209049-19209117,
           19209227-19209343,19209416-19209484,19209839-19209892,
           19210012-19210049,19211243-19211354,19211497-19211619,
           19211728-19211755,19212048-19212104,19212984-19213028,
           19213340-19213361,19213817-19213844,19214338-19214418
          Length = 656

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = +1

Query: 346 RMSSFTEEDRSVLEESGTVLLHSPRKAPSCYFRP*TTNY 462
           R+ S TE++   +  SGTV+L SPR A   Y  P  TN+
Sbjct: 436 RLESSTEDNDQSISGSGTVVLRSPR-ASQVY--PAATNH 471


>01_04_0106 + 16068729-16070651
          Length = 640

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 419 LGEWSNTVPLSSRTDLSSSVNDDILYTVAC 330
           LG++   VP SSR D+++S N D+     C
Sbjct: 126 LGDFDAAVPPSSRADMNASCNRDLTPVPDC 155


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,980,545
Number of Sequences: 37544
Number of extensions: 167741
Number of successful extensions: 456
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 456
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1400060088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)