Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22f24
         (632 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF022974-7|AAC48042.2|  293|Caenorhabditis elegans Serpentine re...    30   1.2  
Z78415-1|CAB01671.1|  280|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z75549-9|CAA99914.1|  357|Caenorhabditis elegans Hypothetical pr...    27   8.4  
M38249-1|AAA28060.1|  357|Caenorhabditis elegans G protein alpha...    27   8.4  
AY008124-1|AAG32077.1|  357|Caenorhabditis elegans heterotrimeri...    27   8.4  

>AF022974-7|AAC48042.2|  293|Caenorhabditis elegans Serpentine
           receptor, class sx protein9 protein.
          Length = 293

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = +3

Query: 306 SMLRLYNYYGV-VTIFAALIPTFMLLSR-KMVFKVLAAFIAIAMQIYVIILVRSEIVKLE 479
           +++  Y+YY V   +    +P F+L ++   V+K+   FI I + +  +IL+R+  +K +
Sbjct: 134 TVVTAYSYYSVNEEVINTCVPMFVLSNQASTVYKLFIIFINIIVTVVYVILIRTFHLKKQ 193

Query: 480 KAQI 491
              +
Sbjct: 194 TGNL 197


>Z78415-1|CAB01671.1|  280|Caenorhabditis elegans Hypothetical
           protein C17G1.1 protein.
          Length = 280

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = +3

Query: 345 IFAALIPTFMLLSRKMVFKVLAAFIAIAMQIYVIILVRSEIVKLEKAQIKIDDEVP 512
           IF+ ++P           KVL A IA+ M I+V++ +   + K E+++   DD  P
Sbjct: 165 IFSFMVPGIRQKRTTFGTKVLLASIAVIM-IFVVLALLKIVYKEERSRKNKDDREP 219


>Z75549-9|CAA99914.1|  357|Caenorhabditis elegans Hypothetical
           protein T19C4.6 protein.
          Length = 357

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/54 (22%), Positives = 28/54 (51%)
 Frame = -2

Query: 265 NIMLIPKILKRTVEVVTSIVLSFNAVDLCSSVVITRNDTATMDIIIFTIPNKSI 104
           +I L  +++     V TS++L  N +DL    ++T+  +  +    F+ P++ +
Sbjct: 247 SIQLFKQVINNKYFVNTSVILFLNKIDLFEEKIVTKKRSLGIAFESFSGPSQDL 300


>M38249-1|AAA28060.1|  357|Caenorhabditis elegans G protein alpha
           subunit protein.
          Length = 357

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/54 (22%), Positives = 28/54 (51%)
 Frame = -2

Query: 265 NIMLIPKILKRTVEVVTSIVLSFNAVDLCSSVVITRNDTATMDIIIFTIPNKSI 104
           +I L  +++     V TS++L  N +DL    ++T+  +  +    F+ P++ +
Sbjct: 247 SIQLFKQVINNKYFVNTSVILFLNKIDLFEEKIVTKKRSLGIAFESFSGPSQDL 300


>AY008124-1|AAG32077.1|  357|Caenorhabditis elegans heterotrimeric G
           protein alphasubunit protein.
          Length = 357

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/54 (22%), Positives = 28/54 (51%)
 Frame = -2

Query: 265 NIMLIPKILKRTVEVVTSIVLSFNAVDLCSSVVITRNDTATMDIIIFTIPNKSI 104
           +I L  +++     V TS++L  N +DL    ++T+  +  +    F+ P++ +
Sbjct: 247 SIQLFKQVINNKYFVNTSVILFLNKIDLFEEKIVTKKRSLGIAFESFSGPSQDL 300


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,266,737
Number of Sequences: 27780
Number of extensions: 272057
Number of successful extensions: 759
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)