BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22f17
(743 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL161452-1|CAI14041.1| 228|Homo sapiens odorant binding protein... 31 5.8
AJ251024-1|CAB71321.1| 228|Homo sapiens putative odorant bindin... 31 5.8
>AL161452-1|CAI14041.1| 228|Homo sapiens odorant binding protein 2A
protein.
Length = 228
Score = 30.7 bits (66), Expect = 5.8
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 403 VIVPTLRKLEGISNWCSRNGTVRSLFQC 486
+++PT R + + NWCS + R F C
Sbjct: 154 ILIPTWRPWKNLRNWCSTRDSRRRTFSC 181
>AJ251024-1|CAB71321.1| 228|Homo sapiens putative odorant binding
protein ag protein.
Length = 228
Score = 30.7 bits (66), Expect = 5.8
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 403 VIVPTLRKLEGISNWCSRNGTVRSLFQC 486
+++PT R + + NWCS + R F C
Sbjct: 154 ILIPTWRPWKNLRNWCSTRDSRRRTFSC 181
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,414,272
Number of Sequences: 237096
Number of extensions: 1762002
Number of successful extensions: 3345
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3345
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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