Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22f11
         (727 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    29   0.045
DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              25   0.73 
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   6.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   9.0  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 29.1 bits (62), Expect = 0.045
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 654 LVSWLPYFKNTFVKPFTDSPD 716
           +V WLP+F    V+PF  +PD
Sbjct: 382 IVCWLPFFVLALVRPFLKNPD 402


>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 25.0 bits (52), Expect = 0.73
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
 Frame = +3

Query: 378 LIRLGIWHILPNSE--IKDVADL--KTNNTFHELKNSRN 482
           LI  G+ ++   S    +D+AD   ++N TFHELK  R+
Sbjct: 12  LIMCGVQNLRARSVNIFQDIADCVDRSNMTFHELKKLRD 50


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -1

Query: 427 SLISEFGSICQIPNLMRKLSTIE 359
           S IS+ G   +  NL+ KLSTIE
Sbjct: 545 SRISKQGLFRRFYNLLGKLSTIE 567


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 420 IKDVADLKTNNTFHELK 470
           +K + DL+T NT H  K
Sbjct: 389 LKKIPDLRTLNTLHSEK 405


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,984
Number of Sequences: 438
Number of extensions: 4052
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)