Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22f09
         (599 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   4.3  
AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismuta...    23   7.5  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        23   10.0 
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     23   10.0 

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 426 EDVQKMIQIGKTQVNRFTYKFKYNSGLDYYP 518
           E++QKMI   K  VN + +    N  + Y+P
Sbjct: 520 EEIQKMIPQHKLGVNGYAFIVDNNGRVLYHP 550


>AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismutase
           1 protein.
          Length = 206

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 396 EEELLPPAYREDVQKMIQIG 455
           EE+L     ++DV K+IQ+G
Sbjct: 74  EEQLQDAVAKQDVSKIIQLG 93


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 435 EHLHDMQEAEVPP 397
           EH HD +EA+V P
Sbjct: 534 EHYHDFKEADVLP 546


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 264 SWLLCGSYHVQWTCKALVE 208
           SWL      ++WTC+  +E
Sbjct: 301 SWLKVVDCGIRWTCECCIE 319


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 599,325
Number of Sequences: 2352
Number of extensions: 11199
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)