Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22f06
(741 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81107-1|CAB03225.1| 258|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z78014-1|CAB01428.1| 411|Caenorhabditis elegans Hypothetical pr... 32 0.37
U64844-12|AAB18312.4| 417|Caenorhabditis elegans Hypothetical p... 30 1.5
Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical pr... 30 2.0
AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like prot... 30 2.0
AC199169-1|ABO33259.1| 450|Caenorhabditis elegans Hypothetical ... 29 2.6
Z99281-18|CAD56258.1| 380|Caenorhabditis elegans Hypothetical p... 29 3.5
Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 28 6.0
U88172-4|AAB42259.1| 224|Caenorhabditis elegans Hypothetical pr... 28 6.0
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 28 6.0
>Z81107-1|CAB03225.1| 258|Caenorhabditis elegans Hypothetical
protein R07H5.1 protein.
Length = 258
Score = 46.0 bits (104), Expect = 3e-05
Identities = 43/213 (20%), Positives = 99/213 (46%), Gaps = 21/213 (9%)
Frame = +3
Query: 153 VRENLVTTAVNFLTNPNVQRCTVESKERFLRSKGLTDTEIQKALEKCMNLVEFPSMSSEL 332
+R ++V A F+ P V+ E + +FL KG+++ EI +A + +E
Sbjct: 9 IRPDMVEAARKFMLTPKVKETPFEEQRQFLLGKGVSEAEILEARASIPPEQLRSQIGTEN 68
Query: 333 MF----FHQSRSSWFRDHVLPF----LMYGSLAYGCYWFYKNCVRHLIF-VDQPKRKTTN 485
M Q + ++ ++ F ++ GS++Y Y F ++ V F + P +
Sbjct: 69 MIPIGGHPQMMIAPKQNGIVSFAQSAVVLGSISYAGYRFVRSYVLPRFFDIPDPATEEIR 128
Query: 486 EC---LEEVRKSLEDLNTNVFALKGELNSLQQNTFRC---------SLDTIKGDIASVKG 629
+ +++++ S++ + +V +L + Q R L+ ++ I+++K
Sbjct: 129 QLQSQVDDLQNSIKFIMDSVSQTTQQLATQQSEISRALYSVANRDADLNRVESGISTIKS 188
Query: 630 ILLNRNQFPSLKSRTDPPSIPAWQRQSEEATST 728
+LL+++ F + + + SIP+WQ+ + ++T
Sbjct: 189 LLLSQHNFAPIVTPSVTSSIPSWQQSATPTSAT 221
>Z78014-1|CAB01428.1| 411|Caenorhabditis elegans Hypothetical
protein F42E8.1 protein.
Length = 411
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/70 (28%), Positives = 39/70 (55%)
Frame = +3
Query: 441 RHLIFVDQPKRKTTNECLEEVRKSLEDLNTNVFALKGELNSLQQNTFRCSLDTIKGDIAS 620
+HL + K+ T ++CL+E + S+EDLN++ +L+ Q+ S T D S
Sbjct: 231 KHLKNLKLAKQLTKSKCLDEAQSSVEDLNSDTKLEDLQLHICQRGIENFSGSTF-FDYFS 289
Query: 621 VKGILLNRNQ 650
+K +++ R++
Sbjct: 290 MKALVIMRSK 299
>U64844-12|AAB18312.4| 417|Caenorhabditis elegans Hypothetical
protein T22F3.10 protein.
Length = 417
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/74 (25%), Positives = 30/74 (40%)
Frame = +3
Query: 288 KCMNLVEFPSMSSELMFFHQSRSSWFRDHVLPFLMYGSLAYGCYWFYKNCVRHLIFVDQP 467
KC+ L P++ + + +R W H L GC N V + IF D+P
Sbjct: 352 KCLALFSAPALVAIFVSDESNRLQWLWVH---------LVLGCLMIITNFVSYFIFTDEP 402
Query: 468 KRKTTNECLEEVRK 509
T +E ++ K
Sbjct: 403 AEWTNSEVTVKLEK 416
>Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical protein
T06E4.3b protein.
Length = 2514
Score = 29.9 bits (64), Expect = 2.0
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 7/164 (4%)
Frame = +3
Query: 147 DGVRENLVTTAVNFLTNPNVQRCTVESKERFLRSKGLTDTEIQKALEKCMNLVEFPSMSS 326
D V + +++T LTN N +R T + +R S + + L + +
Sbjct: 1409 DSVTQWILSTFEEALTNTNHRRLT--NSDRGPASFVFYVFDFIYSYSSSEELRKKKKIWE 1466
Query: 327 ELMFFHQSRSSW-FRD---HVLPFLMYGSLAYGCYWFYKNCVRHLIFVDQPKRKTTNECL 494
+++ F +S SW F+D H P ++ + +G K C+ L + KRKT+ E
Sbjct: 1467 KVISFWKSMMSWTFKDENGHGQPLIVKVAETFG---MEKRCILWLEMFMEQKRKTSTEIE 1523
Query: 495 EEVRKSLEDLNTNVFALKGELNSLQ---QNTFRCSLDTIKGDIA 617
E + N++ ELN ++ R +D + G I+
Sbjct: 1524 SETEAAYYFTLMNLYGRIHELNGVRGAYARLSRIQIDHVYGKIS 1567
>Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical protein
T06E4.3a protein.
Length = 2531
Score = 29.9 bits (64), Expect = 2.0
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 7/164 (4%)
Frame = +3
Query: 147 DGVRENLVTTAVNFLTNPNVQRCTVESKERFLRSKGLTDTEIQKALEKCMNLVEFPSMSS 326
D V + +++T LTN N +R T + +R S + + L + +
Sbjct: 1409 DSVTQWILSTFEEALTNTNHRRLT--NSDRGPASFVFYVFDFIYSYSSSEELRKKKKIWE 1466
Query: 327 ELMFFHQSRSSW-FRD---HVLPFLMYGSLAYGCYWFYKNCVRHLIFVDQPKRKTTNECL 494
+++ F +S SW F+D H P ++ + +G K C+ L + KRKT+ E
Sbjct: 1467 KVISFWKSMMSWTFKDENGHGQPLIVKVAETFG---MEKRCILWLEMFMEQKRKTSTEIE 1523
Query: 495 EEVRKSLEDLNTNVFALKGELNSLQ---QNTFRCSLDTIKGDIA 617
E + N++ ELN ++ R +D + G I+
Sbjct: 1524 SETEAAYYFTLMNLYGRIHELNGVRGAYARLSRIQIDHVYGKIS 1567
>AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like protein
protein.
Length = 2514
Score = 29.9 bits (64), Expect = 2.0
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 7/164 (4%)
Frame = +3
Query: 147 DGVRENLVTTAVNFLTNPNVQRCTVESKERFLRSKGLTDTEIQKALEKCMNLVEFPSMSS 326
D V + +++T LTN N +R T + +R S + + L + +
Sbjct: 1409 DSVTQWILSTFEEALTNTNHRRLT--NSDRGPASFVFYVFDFIYSYSSSEELRKKKKIWE 1466
Query: 327 ELMFFHQSRSSW-FRD---HVLPFLMYGSLAYGCYWFYKNCVRHLIFVDQPKRKTTNECL 494
+++ F +S SW F+D H P ++ + +G K C+ L + KRKT+ E
Sbjct: 1467 KVISFWKSMMSWTFKDENGHGQPLIVKVAETFG---MEKRCILWLEMFMEQKRKTSTEIE 1523
Query: 495 EEVRKSLEDLNTNVFALKGELNSLQ---QNTFRCSLDTIKGDIA 617
E + N++ ELN ++ R +D + G I+
Sbjct: 1524 SETEAAYYFTLMNLYGRIHELNGVRGAYARLSRIQIDHVYGKIS 1567
>AC199169-1|ABO33259.1| 450|Caenorhabditis elegans Hypothetical
protein F38A1.8 protein.
Length = 450
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 465 PKRKTTNECLEEVRKSLEDLNTNVFALKGELNSLQQN 575
PK N EE + +E + + LKG+L SLQ++
Sbjct: 259 PKENDENAADEEKNRFVESMKEQIGTLKGDLKSLQES 295
>Z99281-18|CAD56258.1| 380|Caenorhabditis elegans Hypothetical
protein Y57G11C.36 protein.
Length = 380
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 471 RKTTNECLEEVRKSLEDLNTNVFALKGELNSLQQ 572
+ T+N +E+ K+L D+ + ALKGE + L Q
Sbjct: 40 KSTSNHSDQEMSKNLHDVEAYIDALKGEKHQLAQ 73
>Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical
protein F47G4.4 protein.
Length = 722
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +3
Query: 603 KGDIASVKGILLNRNQ--FPSLKSRTDPPSIPAWQRQSEEATSTEAPG 740
+GD+AS +RN+ PS+ +T PPSI A + S+ A G
Sbjct: 484 EGDVASTVSSSTSRNRRPSPSVAKKTSPPSIYAITSSPAKRASSTASG 531
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +3
Query: 414 CYWFYKNCVRHLIFVDQPKRKTTNECLEEVRKSLEDLNTNVFALKGELNSLQQNTFRCSL 593
C +NC L +DQPK ++ + E +D ++N K + ++NTF CS+
Sbjct: 713 CELNIENC--KLKKLDQPKLVVVSQGICEKDMLTDDFSSNRNFQKPNIEFKRENTFNCSM 770
Query: 594 D 596
+
Sbjct: 771 E 771
>U88172-4|AAB42259.1| 224|Caenorhabditis elegans Hypothetical
protein ZK354.7 protein.
Length = 224
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 96 TNNITRRMSTETLIAAGDGVRENLVTTAVNFLTNPNVQRCTVESK 230
T N ++S ET++ + + + VTT V +TNP +C + K
Sbjct: 14 TENFILKLSAETVLFSNAKLGDE-VTTTVLKMTNPTTDKCAFKVK 57
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = +3
Query: 468 KRKTTNECLEEVRKSLEDLNTNVFALKGELNSLQQNTFRCSLDTIKGDIASVKGILLNRN 647
K K NE ++R++L + + + +K EL + RC D + ++++ +GIL
Sbjct: 268 KLKVVNEENNDLRQNLAENHLELAMIKSELAQV-----RCEFDQKQDELSARRGILFQLE 322
Query: 648 QFPSLKS 668
SL S
Sbjct: 323 PINSLSS 329
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,846,021
Number of Sequences: 27780
Number of extensions: 320835
Number of successful extensions: 1064
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1064
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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