Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22f03
(692 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81137-10|CAB03470.2| 232|Caenorhabditis elegans Hypothetical p... 159 2e-39
Z74031-15|CAE45046.1| 261|Caenorhabditis elegans Hypothetical p... 47 1e-05
AL117207-21|CAN99696.1| 255|Caenorhabditis elegans Hypothetical... 45 6e-05
AL117207-20|CAB60403.3| 228|Caenorhabditis elegans Hypothetical... 40 0.002
U28737-8|ABA61869.1| 537|Caenorhabditis elegans Hypothetical pr... 31 1.0
U28737-7|ABA61870.1| 501|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z54342-11|CAA91146.1| 502|Caenorhabditis elegans Hypothetical p... 30 1.8
Z67990-4|CAA91935.1| 369|Caenorhabditis elegans Hypothetical pr... 29 2.4
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 28 5.5
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 28 5.5
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 28 5.5
Z78417-10|CAB01688.2| 745|Caenorhabditis elegans Hypothetical p... 28 7.3
Z99281-9|CAB16515.1| 242|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z81527-14|CAB04278.2| 506|Caenorhabditis elegans Hypothetical p... 27 9.6
Z79753-8|CAB02089.2| 506|Caenorhabditis elegans Hypothetical pr... 27 9.6
U97008-7|AAB52313.1| 385|Caenorhabditis elegans Temporarily ass... 27 9.6
U88179-4|AAU05547.1| 576|Caenorhabditis elegans Hypothetical pr... 27 9.6
U88179-3|AAX88809.1| 751|Caenorhabditis elegans Hypothetical pr... 27 9.6
U88179-2|AAU05546.1| 770|Caenorhabditis elegans Hypothetical pr... 27 9.6
AF016415-4|AAW88419.1| 298|Caenorhabditis elegans Serpentine re... 27 9.6
>Z81137-10|CAB03470.2| 232|Caenorhabditis elegans Hypothetical
protein W02D9.2 protein.
Length = 232
Score = 159 bits (386), Expect = 2e-39
Identities = 77/168 (45%), Positives = 112/168 (66%), Gaps = 3/168 (1%)
Frame = +2
Query: 188 RGPSSGDNM--EFNTLDEPIKETFMRDLRAVGNKFYHVLIPR-EKTSLLKEWDLWGPLLL 358
RGP ++ EF+TL+EP+ +T RD+ VG KF HV++P +K LL++WDLWGPL +
Sbjct: 43 RGPMQEVDLDAEFDTLEEPVWDTVKRDVLTVGAKFTHVVLPHGDKQQLLRDWDLWGPLFI 102
Query: 359 CTLMATILQGSAERADNSNDGGPEFAEVFVIVWIGAAVVTINSKLLGGNISFFQSVCVLG 538
C +A +LQ + + P+F +VF I + G+ +VT N KLLGGNISFFQS+CV+G
Sbjct: 103 CVGLALLLQHNG-----GTESAPQFTQVFTITFFGSVIVTANIKLLGGNISFFQSLCVIG 157
Query: 539 YCLFPVALALIICRIILFSAQNTFLFFLRLVISMIGFIWATFAATKFL 682
YCL P +A ++C + L + F LRL+I+ IGF+W+T+A+ FL
Sbjct: 158 YCLLPPFVAAVLCSLFL----HGIAFPLRLLITSIGFVWSTYASMGFL 201
>Z74031-15|CAE45046.1| 261|Caenorhabditis elegans Hypothetical
protein F32D8.14 protein.
Length = 261
Score = 47.2 bits (107), Expect = 1e-05
Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 11/200 (5%)
Frame = +2
Query: 110 NTFDSKYDMYPAGDVGVIEGEMNIPGRG----PSSG---DNMEFNTLDEPIKETFMRDLR 268
N + + Y G+M +P G P++G D ++ + P+ E +
Sbjct: 45 NDYYQQNQQYQQPQTNYYGGQMFMPNNGTGAIPNAGVAADGEDYEN-EPPLLEELGINFS 103
Query: 269 AVGNKFYHVLIPREKTSL--LKEWDLWGPLLLCTLM--ATILQGSAERADNSNDGGPEFA 436
+ K VL P ++ + + DL GPL+ C L A +L G GG
Sbjct: 104 HIKEKTIAVLNPTGSATVEVIADQDLAGPLVFCLLFGAALLLHGKLSFGFIYGVGGLGCV 163
Query: 437 EVFVIVWIGAAVVTINSKLLGGNISFFQSVCVLGYCLFPVALALIICRIILFSAQNTFLF 616
++ ++ + A + K NISF + VLGYCL P+AL I+ ++ F
Sbjct: 164 GIYALMNLMAT----DEK----NISFTCTASVLGYCLLPMALLSIVTAVLSFKG------ 209
Query: 617 FLRLVISMIGFIWATFAATK 676
+ +IS + +W + A++K
Sbjct: 210 IIGYIISSLAVLWCSSASSK 229
>AL117207-21|CAN99696.1| 255|Caenorhabditis elegans Hypothetical
protein Y60A3A.19b protein.
Length = 255
Score = 44.8 bits (101), Expect = 6e-05
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 6/155 (3%)
Frame = +2
Query: 236 PIKETFMRDLRAVGNKFYHVLIP----REKTSLLKEW-DLWGPLLLCTLMATILQGSAER 400
P+ E DL + K VL+P R K ++++E D WGPL + A +
Sbjct: 87 PLLEELDIDLTDIYYKIRCVLLPLPYFRMKLNIVRESPDFWGPLAVVLAFAIL------- 139
Query: 401 ADNSNDGGPEFAEVFVIVWI-GAAVVTINSKLLGGNISFFQSVCVLGYCLFPVALALIIC 577
S G + +W G +V ++ LGG++ + Q + ++GYCL P+ + +I
Sbjct: 140 ---SLYGQFGVVSWIITIWFCGGFMVYFIARALGGDVGYSQVLGIVGYCLIPLVVTSLIT 196
Query: 578 RIILFSAQNTFLFFLRLVISMIGFIWATFAATKFL 682
LFS+ L + M G IW+ ++A L
Sbjct: 197 P--LFSS----FRLLSNGLGMFGTIWSVYSAGTLL 225
>AL117207-20|CAB60403.3| 228|Caenorhabditis elegans Hypothetical
protein Y60A3A.19a protein.
Length = 228
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +2
Query: 446 VIVWI-GAAVVTINSKLLGGNISFFQSVCVLGYCLFPVALALIICRIILFSAQNTFLFFL 622
+ +W G +V ++ LGG++ + Q + ++GYCL P+ + +I LFS+ L
Sbjct: 125 ITIWFCGGFMVYFIARALGGDVGYSQVLGIVGYCLIPLVVTSLITP--LFSS----FRLL 178
Query: 623 RLVISMIGFIWATFAATKFL 682
+ M G IW+ ++A L
Sbjct: 179 SNGLGMFGTIWSVYSAGTLL 198
>U28737-8|ABA61869.1| 537|Caenorhabditis elegans Hypothetical
protein F14B8.5a protein.
Length = 537
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 452 VWIGAAVVTINSKLLGGNISFFQSVCVLGYCLFPVALALIICRIILF 592
V+ GA +N +G +F VLG CL +AL LI+C I+ +
Sbjct: 361 VYNGACAAAVNVNNVGVAYAFRTWTIVLG-CLLGIALLLILCLILAY 406
>U28737-7|ABA61870.1| 501|Caenorhabditis elegans Hypothetical
protein F14B8.5b protein.
Length = 501
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 452 VWIGAAVVTINSKLLGGNISFFQSVCVLGYCLFPVALALIICRIILF 592
V+ GA +N +G +F VLG CL +AL LI+C I+ +
Sbjct: 325 VYNGACAAAVNVNNVGVAYAFRTWTIVLG-CLLGIALLLILCLILAY 370
>Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical
protein Y53C12A.3 protein.
Length = 557
Score = 30.3 bits (65), Expect = 1.4
Identities = 32/130 (24%), Positives = 49/130 (37%), Gaps = 4/130 (3%)
Frame = +2
Query: 260 DLRAVGNKFYHVLIPREKTSLLKEWDLWGPLLLCTLMATIL----QGSAERADNSNDGGP 427
D V + IPR+ + + DL+GP +L M +L + S N G
Sbjct: 101 DPAEVRTRLIRSFIPRKPSQIQVSPDLYGPTMLVLTMVALLLYNMKTSGIVIQNGTLMGT 160
Query: 428 EFAEVFVIVWIGAAVVTINSKLLGGNISFFQSVCVLGYCLFPVALALIICRIILFSAQNT 607
F + + + I LL F + GY L L L++ LF + +
Sbjct: 161 AMFTCFGSWMLISGALWIACFLLAAEQPFLTILSSFGYSLTSQCLVLLLTS--LFHSSHD 218
Query: 608 FLFFLRLVIS 637
LFF L+ S
Sbjct: 219 HLFFFVLLAS 228
>Z54342-11|CAA91146.1| 502|Caenorhabditis elegans Hypothetical
protein C08H9.5 protein.
Length = 502
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +2
Query: 524 VCVLGYCLFPVALALIICRIILF 592
+ +L YCLF VALA++IC +I+F
Sbjct: 76 IFILLYCLF-VALAILICGLIIF 97
>Z67990-4|CAA91935.1| 369|Caenorhabditis elegans Hypothetical
protein F02D10.4 protein.
Length = 369
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = -2
Query: 634 YD*PQEE*EGVLRTEQYDAAD-DEREGHREQT----VAENAHRLEE*NVSTQQFRVDSYN 470
YD P + G TEQYD D + H Q V+EN R E +++ + + D
Sbjct: 97 YDTPGRQENGGRYTEQYDTVDQSSKREHLSQRYGDHVSENNSRTEYKSINNGESKTDRDC 156
Query: 469 CSP 461
C P
Sbjct: 157 CGP 159
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical protein
K07E12.1b protein.
Length = 12268
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 310 KDQSFKRMGPVGAVTPLHSYGHY 378
KD+ K +GP G V P S GHY
Sbjct: 10420 KDEEGKPVGPDGQVLPTDSAGHY 10442
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical protein
K07E12.1a protein.
Length = 13100
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 310 KDQSFKRMGPVGAVTPLHSYGHY 378
KD+ K +GP G V P S GHY
Sbjct: 10465 KDEEGKPVGPDGQVLPTDSAGHY 10487
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin protein.
Length = 13100
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 310 KDQSFKRMGPVGAVTPLHSYGHY 378
KD+ K +GP G V P S GHY
Sbjct: 10465 KDEEGKPVGPDGQVLPTDSAGHY 10487
>Z78417-10|CAB01688.2| 745|Caenorhabditis elegans Hypothetical
protein C35C5.2 protein.
Length = 745
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 419 GGPEFAEVFVIVWIGAAVVTINSKLLGGN 505
G EFAE + + + AV IN L+GGN
Sbjct: 415 GSTEFAEEYRLQLMRRAVAVINMDLIGGN 443
>Z99281-9|CAB16515.1| 242|Caenorhabditis elegans Hypothetical
protein Y57G11C.14 protein.
Length = 242
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +2
Query: 38 CVGE-IK*NYKTHILFNS*INNIEMNTFDSKYDMYPAGDVGVIEGEMNIPGRGPSSGDNM 214
C+ E +K + K I+FN + + E FD Y + D GV+E + P +
Sbjct: 80 CMDETLKNSSKPRIIFNKQLGHAESIDFDVPSLSYESSDKGVVESTTSTSVSNPKKTTSS 139
Query: 215 EFNTLDE 235
T E
Sbjct: 140 SMFTKSE 146
>Z81527-14|CAB04278.2| 506|Caenorhabditis elegans Hypothetical
protein F35E12.8 protein.
Length = 506
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -3
Query: 231 SNVLNSMLSPLDGPRPGIFISPSITPTSPAGYMSYFESNVFISILF 94
S+ ++ L+P +G + IF S TP + +GY F S ++ F
Sbjct: 347 SSTADNWLTPYNGRKGSIFSSSLWTPEATSGYNHTFVSTNVMTFTF 392
>Z79753-8|CAB02089.2| 506|Caenorhabditis elegans Hypothetical
protein F35E12.8 protein.
Length = 506
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -3
Query: 231 SNVLNSMLSPLDGPRPGIFISPSITPTSPAGYMSYFESNVFISILF 94
S+ ++ L+P +G + IF S TP + +GY F S ++ F
Sbjct: 347 SSTADNWLTPYNGRKGSIFSSSLWTPEATSGYNHTFVSTNVMTFTF 392
>U97008-7|AAB52313.1| 385|Caenorhabditis elegans Temporarily
assigned gene nameprotein 293 protein.
Length = 385
Score = 27.5 bits (58), Expect = 9.6
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +2
Query: 278 NKFYHVLIPREKTSLLKEWDLWGPLLLCTLMATILQGSAERADNSNDGGPEFAEVFVIVW 457
+KF + +I ++S L+ D++G L+ C L T+ + + AD S D VW
Sbjct: 116 DKFIYTVIIFTQSSSLRLSDMFGLLVSCILAFTVPESAF--ADISGDLNCTQYNGTFFVW 173
Query: 458 IGAAVVTINS 487
AAV N+
Sbjct: 174 TPAAVACSNA 183
>U88179-4|AAU05547.1| 576|Caenorhabditis elegans Hypothetical
protein R57.1b protein.
Length = 576
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 419 GGPEFAEVFVIVWIGAAVVTINSKLLGGNIS 511
G EF E FV + AVV IN + GNIS
Sbjct: 422 GSTEFVEEFVNILQKRAVVYINMDCIQGNIS 452
>U88179-3|AAX88809.1| 751|Caenorhabditis elegans Hypothetical
protein R57.1c protein.
Length = 751
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 419 GGPEFAEVFVIVWIGAAVVTINSKLLGGNIS 511
G EF E FV + AVV IN + GNIS
Sbjct: 422 GSTEFVEEFVNILQKRAVVYINMDCIQGNIS 452
>U88179-2|AAU05546.1| 770|Caenorhabditis elegans Hypothetical
protein R57.1a protein.
Length = 770
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 419 GGPEFAEVFVIVWIGAAVVTINSKLLGGNIS 511
G EF E FV + AVV IN + GNIS
Sbjct: 441 GSTEFVEEFVNILQKRAVVYINMDCIQGNIS 471
>AF016415-4|AAW88419.1| 298|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 31 protein.
Length = 298
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +2
Query: 548 FPVALALIICRIILFSAQNTFLFFLRLVISMIGFIWATFAATK 676
F +AL I I++FS ++ F+ R +++ +G W+ A+ +
Sbjct: 54 FGLALLSYISFILIFSEKSEFMIEHRNLLTYLGLFWSNTASCR 96
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,637,686
Number of Sequences: 27780
Number of extensions: 402486
Number of successful extensions: 1479
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1475
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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