Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22f02
         (665 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    79   1e-16
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           23   6.5  
AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosoma...    23   6.5  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 79.0 bits (186), Expect = 1e-16
 Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 7/170 (4%)
 Frame = +3

Query: 177 VKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 356
           V G     H   F    L+ E++  +    +  P+ +Q   IP  + G D++  A++G G
Sbjct: 164 VSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQTGSG 223

Query: 357 KTAVFVLATLQQLEPSESHV-------YVLVMCHTRELAFQISKEYERFSKYMSGVRVSV 515
           KTA F+L  +  L   E  +       Y++++  TRELA QI  E  +F+ + + ++V V
Sbjct: 224 KTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFA-HGTKLKVCV 282

Query: 516 FFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDE 665
            +GG  +Q   ++++  C H++V TPGR+L                +LDE
Sbjct: 283 SYGGTAVQHQLQLMRGGC-HVLVATPGRLLDFIDRGYVTFENVNFVVLDE 331


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 492 YISRNARTPYLFGKPTLWCGT 430
           + + +A   YLFG   +WC T
Sbjct: 53  FYTHSALLNYLFGMEGVWCST 73


>AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosomal
           protein protein.
          Length = 56

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = -1

Query: 428 YKHVNVALGGFQLLQCCQNKHGCLTHTGLGLAKYVHTE 315
           Y H      G +  + C N HG +   GL + +    E
Sbjct: 8   YSHPRKYGQGSRFWRACSNNHGMIRKYGLNICRQCFRE 45


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,835
Number of Sequences: 2352
Number of extensions: 14183
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)