Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22f02
(665 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 261 4e-70
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 261 4e-70
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 261 4e-70
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 110 7e-25
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 110 7e-25
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 98 4e-21
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 98 4e-21
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 90 1e-18
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 88 5e-18
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 88 6e-18
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 86 2e-17
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 80 2e-15
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 79 4e-15
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 79 4e-15
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 75 5e-14
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 75 5e-14
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 74 8e-14
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 74 8e-14
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 74 8e-14
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 73 2e-13
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 73 2e-13
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 73 2e-13
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 70 1e-12
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 70 1e-12
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 66 3e-11
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 66 3e-11
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 62 3e-10
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 61 8e-10
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 61 8e-10
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 61 8e-10
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 56 2e-08
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 56 2e-08
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 56 2e-08
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 56 2e-08
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 56 3e-08
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 54 7e-08
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 54 9e-08
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 54 9e-08
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 54 1e-07
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 52 3e-07
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 52 3e-07
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 52 3e-07
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 51 8e-07
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 48 5e-06
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 47 1e-05
Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical pr... 27 9.1
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 261 bits (639), Expect = 4e-70
Identities = 121/165 (73%), Positives = 136/165 (82%)
Frame = +3
Query: 171 KEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSG 350
++ KG+Y SIHSSGFRDFLLKPEILRAI DCGFEHPSEVQHECIPQA+LGMD++CQAKSG
Sbjct: 29 RKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSG 88
Query: 351 MGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGM 530
MGKTAVFV+ TLQQLEP + V V+ MCHTRELAFQISKEYERFSKY+ GV+V+VFFGGM
Sbjct: 89 MGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGM 148
Query: 531 PIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDE 665
I+KDEE L CPHIVVGTPGR+LA F+LDE
Sbjct: 149 AIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDE 193
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 261 bits (639), Expect = 4e-70
Identities = 121/165 (73%), Positives = 136/165 (82%)
Frame = +3
Query: 171 KEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSG 350
++ KG+Y SIHSSGFRDFLLKPEILRAI DCGFEHPSEVQHECIPQA+LGMD++CQAKSG
Sbjct: 29 RKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSG 88
Query: 351 MGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGM 530
MGKTAVFV+ TLQQLEP + V V+ MCHTRELAFQISKEYERFSKY+ GV+V+VFFGGM
Sbjct: 89 MGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGM 148
Query: 531 PIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDE 665
I+KDEE L CPHIVVGTPGR+LA F+LDE
Sbjct: 149 AIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDE 193
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 261 bits (639), Expect = 4e-70
Identities = 121/165 (73%), Positives = 136/165 (82%)
Frame = +3
Query: 171 KEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSG 350
++ KG+Y SIHSSGFRDFLLKPEILRAI DCGFEHPSEVQHECIPQA+LGMD++CQAKSG
Sbjct: 28 RKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSG 87
Query: 351 MGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGM 530
MGKTAVFV+ TLQQLEP + V V+ MCHTRELAFQISKEYERFSKY+ GV+V+VFFGGM
Sbjct: 88 MGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGM 147
Query: 531 PIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDE 665
I+KDEE L CPHIVVGTPGR+LA F+LDE
Sbjct: 148 AIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDE 192
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 110 bits (265), Expect = 7e-25
Identities = 62/163 (38%), Positives = 88/163 (53%)
Frame = +3
Query: 177 VKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 356
++G+Y + S F D LK E+LR I GFE PS +Q I G D++ QA+SG G
Sbjct: 20 IEGNYDQVVES-FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTG 78
Query: 357 KTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPI 536
KTA F ++ LQ+++ + HV LVM TRELA QI K +Y++ V + GG +
Sbjct: 79 KTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN-VNILPCIGGTSV 137
Query: 537 QKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDE 665
+ D+ L+ H+VVGTPGR+ F+LDE
Sbjct: 138 RDDQRKLEAGI-HVVVGTPGRVGDMINRNALDTSRIKMFVLDE 179
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 110 bits (265), Expect = 7e-25
Identities = 62/163 (38%), Positives = 88/163 (53%)
Frame = +3
Query: 177 VKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 356
++G+Y + S F D LK E+LR I GFE PS +Q I G D++ QA+SG G
Sbjct: 20 IEGNYDQVVES-FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTG 78
Query: 357 KTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPI 536
KTA F ++ LQ+++ + HV LVM TRELA QI K +Y++ V + GG +
Sbjct: 79 KTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN-VNILPCIGGTSV 137
Query: 537 QKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDE 665
+ D+ L+ H+VVGTPGR+ F+LDE
Sbjct: 138 RDDQRKLEAGI-HVVVGTPGRVGDMINRNALDTSRIKMFVLDE 179
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 98.3 bits (234), Expect = 4e-21
Identities = 55/163 (33%), Positives = 86/163 (52%), Gaps = 1/163 (0%)
Frame = +3
Query: 180 KGSYVSIHSS-GFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 356
+GS + + S+ F ++ + L + + F+ PS VQ IP +LG D+L QAKSG G
Sbjct: 12 RGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTG 71
Query: 357 KTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPI 536
KT VF + ++ L+ SH+ +++ TRE++ QI + + + +G R SV+ GG
Sbjct: 72 KTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP--TGARTSVYVGGSAH 129
Query: 537 QKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDE 665
+ + LK P IV+GTPGRI F+LDE
Sbjct: 130 KLNLIDLKQTRPQIVIGTPGRIAQLVKLGAMNMSHVDFFVLDE 172
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 98.3 bits (234), Expect = 4e-21
Identities = 55/163 (33%), Positives = 86/163 (52%), Gaps = 1/163 (0%)
Frame = +3
Query: 180 KGSYVSIHSS-GFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 356
+GS + + S+ F ++ + L + + F+ PS VQ IP +LG D+L QAKSG G
Sbjct: 12 RGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTG 71
Query: 357 KTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPI 536
KT VF + ++ L+ SH+ +++ TRE++ QI + + + +G R SV+ GG
Sbjct: 72 KTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP--TGARTSVYVGGSAH 129
Query: 537 QKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDE 665
+ + LK P IV+GTPGRI F+LDE
Sbjct: 130 KLNLIDLKQTRPQIVIGTPGRIAQLVKLGAMNMSHVDFFVLDE 172
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 90.2 bits (214), Expect = 1e-18
Identities = 50/151 (33%), Positives = 81/151 (53%)
Frame = +3
Query: 213 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 392
F DF L ++L I + G+E PS +Q I A+ G DIL +AK+G GKT + + +++
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104
Query: 393 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 572
++P+ + +V+ TRELA Q S+ SK++ ++V V GG + +D+ +
Sbjct: 105 IQPALKAIQAMVIVPTRELALQTSQICVELSKHIQ-LKVMVTTGGTDL-RDDIMRLNGTV 162
Query: 573 HIVVGTPGRILAXXXXXXXXXXXXXXFILDE 665
H+V+ TPGRIL +LDE
Sbjct: 163 HLVIATPGRILDLMEKGVAKMEHCKTLVLDE 193
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 88.2 bits (209), Expect = 5e-18
Identities = 51/146 (34%), Positives = 71/146 (48%)
Frame = +3
Query: 228 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 407
L+ ++LR I GFE PS +Q IP + D++ QA+SG GKTA F ++ LQ L+
Sbjct: 33 LREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQV 92
Query: 408 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVG 587
L++ TRELA QI K YM+ V+ GG + +D L H+V G
Sbjct: 93 RETQALILSPTRELAVQIQKVVLALGDYMN-VQCHACIGGTNLGEDIRKLDYG-QHVVSG 150
Query: 588 TPGRILAXXXXXXXXXXXXXXFILDE 665
TPGR+ +LDE
Sbjct: 151 TPGRVFDMIRRRNLRTRAIKLLVLDE 176
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 87.8 bits (208), Expect = 6e-18
Identities = 50/146 (34%), Positives = 71/146 (48%)
Frame = +3
Query: 228 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 407
L+ ++LR I GFE PS +Q +P + D++ QA+SG GKTA F ++ LQ L+
Sbjct: 33 LREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQV 92
Query: 408 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVG 587
L++ TRELA QI K YM+ V+ GG + +D L H+V G
Sbjct: 93 RETQALILSPTRELAVQIQKVVLALGDYMN-VQCHACIGGTNLGEDIRKLDYG-QHVVSG 150
Query: 588 TPGRILAXXXXXXXXXXXXXXFILDE 665
TPGR+ +LDE
Sbjct: 151 TPGRVFDMIRRRNLRTRAIKLLVLDE 176
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 85.8 bits (203), Expect = 2e-17
Identities = 48/134 (35%), Positives = 75/134 (55%), Gaps = 3/134 (2%)
Frame = +3
Query: 213 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 392
F L +IL+A G+ P+ +Q CIP A+ G DI A +G GKTA FVL L++
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILER 209
Query: 393 L---EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 563
+ S VLV+ TRELA Q+ + + + S ++ + V + GG+ ++ E L++
Sbjct: 210 MIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQ-LEVCLCAGGLDLKAQEAALRS 268
Query: 564 ACPHIVVGTPGRIL 605
P +VV TPGR++
Sbjct: 269 G-PDVVVATPGRLI 281
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 79.8 bits (188), Expect = 2e-15
Identities = 45/150 (30%), Positives = 75/150 (50%)
Frame = +3
Query: 156 EVAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILC 335
+V ++ K + F + + + A G+ PS++Q +P A+ G D++
Sbjct: 27 KVVTEEIEKDDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIG 86
Query: 336 QAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSV 515
A++G GKT F + LQ L + LV+ TRELAFQI +++E + G+ +V
Sbjct: 87 LAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGI-GLIAAV 145
Query: 516 FFGGMPIQKDEEVLKTACPHIVVGTPGRIL 605
GG+ + L PHI+V TPGR++
Sbjct: 146 IVGGVDMAAQAMALARR-PHIIVATPGRLV 174
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 78.6 bits (185), Expect = 4e-15
Identities = 42/106 (39%), Positives = 62/106 (58%)
Frame = +3
Query: 285 VQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQIS 464
VQ CIP+ + G DIL A++G GKT F + LQ+L +Y L++ TRELAFQI+
Sbjct: 115 VQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIA 174
Query: 465 KEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 602
+++ K ++ ++ SV GG + L PH+VV TPGR+
Sbjct: 175 EQFTALGKPIT-LKCSVIVGGRSLIHQARELSER-PHVVVATPGRL 218
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 78.6 bits (185), Expect = 4e-15
Identities = 42/106 (39%), Positives = 62/106 (58%)
Frame = +3
Query: 285 VQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQIS 464
VQ CIP+ + G DIL A++G GKT F + LQ+L +Y L++ TRELAFQI+
Sbjct: 115 VQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIA 174
Query: 465 KEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 602
+++ K ++ ++ SV GG + L PH+VV TPGR+
Sbjct: 175 EQFTALGKPIT-LKCSVIVGGRSLIHQARELSER-PHVVVATPGRL 218
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 74.9 bits (176), Expect = 5e-14
Identities = 42/135 (31%), Positives = 76/135 (56%), Gaps = 1/135 (0%)
Frame = +3
Query: 204 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 383
+ G++ L + +AI GF P+ +Q + IP + G D++ +++G GKTA FV+
Sbjct: 23 AGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPM 82
Query: 384 LQQLEPSE-SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 560
LQ+L+ + + + L++ TRELA Q K + ++ +G+R + GG I++ +
Sbjct: 83 LQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRF-TGLRCACLVGGDQIEEQFSTIH 141
Query: 561 TACPHIVVGTPGRIL 605
P I++ TPGR+L
Sbjct: 142 EN-PDILLATPGRLL 155
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 74.9 bits (176), Expect = 5e-14
Identities = 42/135 (31%), Positives = 76/135 (56%), Gaps = 1/135 (0%)
Frame = +3
Query: 204 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 383
+ G++ L + +AI GF P+ +Q + IP + G D++ +++G GKTA FV+
Sbjct: 23 AGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPM 82
Query: 384 LQQLEPSE-SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 560
LQ+L+ + + + L++ TRELA Q K + ++ +G+R + GG I++ +
Sbjct: 83 LQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRF-TGLRCACLVGGDQIEEQFSTIH 141
Query: 561 TACPHIVVGTPGRIL 605
P I++ TPGR+L
Sbjct: 142 EN-PDILLATPGRLL 155
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 74.1 bits (174), Expect = 8e-14
Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Frame = +3
Query: 174 EVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGM 353
EV G V F + P ++ + G+ P+ VQ IP + D++ A++G
Sbjct: 128 EVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGS 187
Query: 354 GKTAVFVLATLQQL---------EPSESH---VY---VLVMCHTRELAFQISKEYERFSK 488
GKTA F+L +Q + P+ ++ Y LV+ TRELA QI KE +FS
Sbjct: 188 GKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFS- 246
Query: 489 YMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDE 665
Y S ++ ++ +GG +D+ A HI++ TPGR++ +LDE
Sbjct: 247 YKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDE 305
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 74.1 bits (174), Expect = 8e-14
Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Frame = +3
Query: 174 EVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGM 353
EV G V F + P ++ + G+ P+ VQ IP + D++ A++G
Sbjct: 112 EVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGS 171
Query: 354 GKTAVFVLATLQQL---------EPSESH---VY---VLVMCHTRELAFQISKEYERFSK 488
GKTA F+L +Q + P+ ++ Y LV+ TRELA QI KE +FS
Sbjct: 172 GKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFS- 230
Query: 489 YMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDE 665
Y S ++ ++ +GG +D+ A HI++ TPGR++ +LDE
Sbjct: 231 YKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDE 289
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 74.1 bits (174), Expect = 8e-14
Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Frame = +3
Query: 174 EVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGM 353
EV G V F + P ++ + G+ P+ VQ IP + D++ A++G
Sbjct: 109 EVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGS 168
Query: 354 GKTAVFVLATLQQL---------EPSESH---VY---VLVMCHTRELAFQISKEYERFSK 488
GKTA F+L +Q + P+ ++ Y LV+ TRELA QI KE +FS
Sbjct: 169 GKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFS- 227
Query: 489 YMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDE 665
Y S ++ ++ +GG +D+ A HI++ TPGR++ +LDE
Sbjct: 228 YKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDE 286
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 72.5 bits (170), Expect = 2e-13
Identities = 41/134 (30%), Positives = 75/134 (55%), Gaps = 4/134 (2%)
Frame = +3
Query: 207 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLG--MDILCQAKSGMGKTAVFVLA 380
S FR+ LKPE+L+A+ F+ P+ +Q +P ++ +++ QA+SG GKTA FVL
Sbjct: 209 SSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLT 268
Query: 381 TLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRV--SVFFGGMPIQKDEEV 554
L +++ + + + T ELA QI + E+ K++ +++ ++ G M + ++
Sbjct: 269 MLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAMRGRKL 328
Query: 555 LKTACPHIVVGTPG 596
+ IV+GTPG
Sbjct: 329 TE----QIVIGTPG 338
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 72.5 bits (170), Expect = 2e-13
Identities = 41/134 (30%), Positives = 75/134 (55%), Gaps = 4/134 (2%)
Frame = +3
Query: 207 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLG--MDILCQAKSGMGKTAVFVLA 380
S FR+ LKPE+L+A+ F+ P+ +Q +P ++ +++ QA+SG GKTA FVL
Sbjct: 234 SSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLT 293
Query: 381 TLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRV--SVFFGGMPIQKDEEV 554
L +++ + + + T ELA QI + E+ K++ +++ ++ G M + ++
Sbjct: 294 MLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAMRGRKL 353
Query: 555 LKTACPHIVVGTPG 596
+ IV+GTPG
Sbjct: 354 TE----QIVIGTPG 363
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 72.5 bits (170), Expect = 2e-13
Identities = 41/134 (30%), Positives = 75/134 (55%), Gaps = 4/134 (2%)
Frame = +3
Query: 207 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLG--MDILCQAKSGMGKTAVFVLA 380
S FR+ LKPE+L+A+ F+ P+ +Q +P ++ +++ QA+SG GKTA FVL
Sbjct: 618 SSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLT 677
Query: 381 TLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRV--SVFFGGMPIQKDEEV 554
L +++ + + + T ELA QI + E+ K++ +++ ++ G M + ++
Sbjct: 678 MLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAMRGRKL 737
Query: 555 LKTACPHIVVGTPG 596
+ IV+GTPG
Sbjct: 738 TE----QIVIGTPG 747
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 70.1 bits (164), Expect = 1e-12
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Frame = +3
Query: 165 PKKEVKGSYVSIHSSGFRDFLLKP-EILRAIVDCGFEHPSEVQHECIPQAVLG-MDILCQ 338
PKK K + S ++ F P E+L AI GF P+E+Q +P AV D+L
Sbjct: 140 PKKSKKEASKKTDISAWKQFYFLPNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGA 199
Query: 339 AKSGMGKTAVF---VLATL-------QQLEPSESH-VYVLVMCHTRELAFQISKEYERFS 485
A++G GKT F ++A L Q+ E +E L++ TREL QI K
Sbjct: 200 AETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALI 259
Query: 486 KYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILA 608
+ S+ GG+ K E ++ P IVV TPGR+ A
Sbjct: 260 STTQLIATSI-VGGLAQVKQERIISQQRPDIVVATPGRLWA 299
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 70.1 bits (164), Expect = 1e-12
Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 9/172 (5%)
Frame = +3
Query: 177 VKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 356
+KG V + + E+ +A+ + G+ P+ +Q + IP + D++ A++G G
Sbjct: 291 IKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSG 350
Query: 357 KTAVFVL------ATLQQLEPSESH---VYVLVMCHTRELAFQISKEYERFSKYMSGVRV 509
KTA F+L +L ++E E Y ++M TRELA QI +E +F K + V
Sbjct: 351 KTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLLGIKTV 410
Query: 510 SVFFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDE 665
SV G ++D+ + +V+ TPGR+L ILDE
Sbjct: 411 SVIGGAS--REDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVILDE 460
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 65.7 bits (153), Expect = 3e-11
Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 6/137 (4%)
Frame = +3
Query: 213 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL-- 386
F F ++ AI +E P+ +Q IP A+ G D+L AK+G GKTA ++ +
Sbjct: 267 FAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVH 326
Query: 387 ----QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEV 554
L+ E V V+V+ TRELA Q+ +E ++F K + + + GG ++ E
Sbjct: 327 IMDQPDLKAGEGPVAVIVV-PTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNE- 384
Query: 555 LKTACPHIVVGTPGRIL 605
L+ +VV TPGRI+
Sbjct: 385 LQNEGAEMVVCTPGRII 401
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 65.7 bits (153), Expect = 3e-11
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 6/119 (5%)
Frame = +3
Query: 267 FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQ------QLEPSESHVYVLV 428
+ P+ +Q + IP + G D++ AK+G GKT F+L + +LE + + V +
Sbjct: 324 YSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAV-I 382
Query: 429 MCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRIL 605
+ TRELA Q KE +F+K + G++V+ +GG+ I + LK IVV TPGR++
Sbjct: 383 LAPTRELAMQTYKEANKFAKPL-GLKVACTYGGVGISEQIADLKRGA-EIVVCTPGRMI 439
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 62.5 bits (145), Expect = 3e-10
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 17/181 (9%)
Frame = +3
Query: 174 EVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGM 353
E G V S F D L I I G++ P+ VQ IP G D++ A++G
Sbjct: 155 EATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGS 214
Query: 354 GKTAVFVLATLQQL---EPSESHVYV-------------LVMCHTRELAFQISKEYERFS 485
GKTA F++ + + P H V LV+ TREL+ QI E +F+
Sbjct: 215 GKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKFA 274
Query: 486 KYMSGVRVSVFFGGMPIQKDE-EVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILD 662
Y + + ++ +GG KD+ L+ C HI++ TPGR++ +LD
Sbjct: 275 -YRTPITSALLYGGRENYKDQIHKLRLGC-HILIATPGRLIDVMDQGLIGMEGCRYLVLD 332
Query: 663 E 665
E
Sbjct: 333 E 333
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 60.9 bits (141), Expect = 8e-10
Identities = 33/127 (25%), Positives = 64/127 (50%)
Frame = +3
Query: 228 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 407
LK E+LR I GFE PS +Q + G D+ Q+++G GKT + ++ LQ ++ +
Sbjct: 3 LKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCED 62
Query: 408 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVG 587
+H+ V+++ R +A + +E+ + V+ G + + + H+++G
Sbjct: 63 AHLQVILLAPQRGMA---QRAHEQLKSLGRNLNVNATCLGFDTTAENDKIS----HVLMG 115
Query: 588 TPGRILA 608
TP L+
Sbjct: 116 TPKDFLS 122
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 60.9 bits (141), Expect = 8e-10
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Frame = +3
Query: 180 KGSYVSIHS-SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 356
+G V+I F D + + R + G+ + +Q +P G DIL A++G G
Sbjct: 288 RGQPVTIQPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSG 347
Query: 357 KTAVFVLATLQQL-------EPSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRV 509
KTA F+L + +L +E Y +++ TRELA QI E +FS Y S + +
Sbjct: 348 KTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFS-YQSVMEI 406
Query: 510 SVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 602
+GG+ + ++ + C I+VGT GR+
Sbjct: 407 KPVYGGINVGYNKSQIMKGCT-IIVGTIGRV 436
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 60.9 bits (141), Expect = 8e-10
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Frame = +3
Query: 180 KGSYVSIHS-SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 356
+G V+I F D + + R + G+ + +Q +P G DIL A++G G
Sbjct: 288 RGQPVTIQPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSG 347
Query: 357 KTAVFVLATLQQL-------EPSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRV 509
KTA F+L + +L +E Y +++ TRELA QI E +FS Y S + +
Sbjct: 348 KTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFS-YQSVMEI 406
Query: 510 SVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 602
+GG+ + ++ + C I+VGT GR+
Sbjct: 407 KPVYGGINVGYNKSQIMKGCT-IIVGTIGRV 436
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 56.4 bits (130), Expect = 2e-08
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 9/160 (5%)
Frame = +3
Query: 213 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 392
F + L + + + G+ + +Q +P G DI+ A++G GKTA F+L + +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 393 L-------EPSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD 545
L E Y +++ TRELA QI E +F+ Y + + + +GG+ + +
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFA-YQTMMEIKPVYGGLAVGYN 461
Query: 546 EEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDE 665
+ ++ I+VGT GRI F+LDE
Sbjct: 462 KGQIEKGAT-IIVGTVGRIKHFCEEGTIKLDKCRFFVLDE 500
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 56.4 bits (130), Expect = 2e-08
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 9/160 (5%)
Frame = +3
Query: 213 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 392
F + L + + + G+ + +Q +P G DI+ A++G GKTA F+L + +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 393 L-------EPSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD 545
L E Y +++ TRELA QI E +F+ Y + + + +GG+ + +
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFA-YQTMMEIKPVYGGLAVGYN 461
Query: 546 EEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDE 665
+ ++ I+VGT GRI F+LDE
Sbjct: 462 KGQIEKGAT-IIVGTVGRIKHFCEEGTIKLDKCRFFVLDE 500
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 56.4 bits (130), Expect = 2e-08
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 9/160 (5%)
Frame = +3
Query: 213 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 392
F + L + + + G+ + +Q +P G DI+ A++G GKTA F+L + +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 393 L-------EPSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD 545
L E Y +++ TRELA QI E +F+ Y + + + +GG+ + +
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFA-YQTMMEIKPVYGGLAVGYN 461
Query: 546 EEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDE 665
+ ++ I+VGT GRI F+LDE
Sbjct: 462 KGQIEKGAT-IIVGTVGRIKHFCEEGTIKLDKCRFFVLDE 500
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 56.0 bits (129), Expect = 2e-08
Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 11/124 (8%)
Frame = +3
Query: 264 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVL-------ATLQQLEPSESH--- 413
GFE PS +Q + P + G D + +++G GKT F+L A L Q E ++
Sbjct: 103 GFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKP 162
Query: 414 -VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGT 590
+VLV+ TRELA QI E +++S +G + +GG + E + IV+ T
Sbjct: 163 SPFVLVLSPTRELAQQIEGEVKKYS--YNGYKSVCLYGGGSRPEQVEACRGGV-EIVIAT 219
Query: 591 PGRI 602
PGR+
Sbjct: 220 PGRL 223
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 55.6 bits (128), Expect = 3e-08
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 4/135 (2%)
Frame = +3
Query: 213 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 392
F DF L L + D + P+E+Q + I ++ G D++ AK+G GKT V+ L+
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 393 LEPSE-SHVY---VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 560
L ++ S Y L++ TRELA Q + G + GG + + +
Sbjct: 138 LWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAH-HGFSCGLVIGGSDVAFERN--R 194
Query: 561 TACPHIVVGTPGRIL 605
+ +I+V TPGR+L
Sbjct: 195 ISGINIIVCTPGRLL 209
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 54.4 bits (125), Expect = 7e-08
Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 6/139 (4%)
Frame = +3
Query: 267 FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESH------VYVLV 428
F+ P+ +Q P A+ G DI+ AK+G GKT F+L L + ++H VLV
Sbjct: 149 FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHI-TKQAHRQRGEGPAVLV 207
Query: 429 MCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILA 608
+ TRELA Q+ + F + G++++ FGG L+ IVV TPGR+L
Sbjct: 208 LLPTRELAQQVQEVSIDFC-HSLGLKMTCLFGGASKGPQARDLERGV-DIVVATPGRLLD 265
Query: 609 XXXXXXXXXXXXXXFILDE 665
+LDE
Sbjct: 266 FLDNGTTNMKKCSYLVLDE 284
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 54.0 bits (124), Expect = 9e-08
Identities = 42/126 (33%), Positives = 60/126 (47%), Gaps = 12/126 (9%)
Frame = +3
Query: 267 FEHPSEVQHECIPQAVLG-MDILCQAKSGMGKTAVF---VLATL-------QQLEPSESH 413
F P+E+Q +P AV D+L A++G GKT F ++A L Q+ E +E
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 414 -VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGT 590
L++ TREL QI K + S+ GG+ K E ++ P IVV T
Sbjct: 68 GPRALIVAPTRELVIQIMKHINALISTTQLIATSIV-GGLAQVKQERIISQQRPDIVVAT 126
Query: 591 PGRILA 608
PGR+ A
Sbjct: 127 PGRLWA 132
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 54.0 bits (124), Expect = 9e-08
Identities = 42/158 (26%), Positives = 78/158 (49%), Gaps = 7/158 (4%)
Frame = +3
Query: 213 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 392
F DF L IL++I + G+E ++VQ I A+ +I+ +A++G GKT F++ +Q+
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 393 L----EPSESHV--YVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDE-E 551
L + ++ V +++ T+EL QI K + + S+ + ++ I ++E
Sbjct: 151 LIAESKTNDGSVGPSAVIIAPTKELITQIYKLFVKLSQALPFLQA---INLCDINEEENS 207
Query: 552 VLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDE 665
V H+VV TPG++L ++DE
Sbjct: 208 VWLEDRSHVVVTTPGKLLRMCSLRPEYCTLVSYLVMDE 245
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 53.6 bits (123), Expect = 1e-07
Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 6/128 (4%)
Frame = +3
Query: 240 ILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLE----PSE 407
+L+A+ GF +E+Q + I + G D+L AK+G GKT F+L ++ L
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQH 138
Query: 408 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVS--VFFGGMPIQKDEEVLKTACPHIV 581
+ V+++ TREL+ Q Y S+ + G ++ + GG +++ L I+
Sbjct: 139 NGTGVIIVSPTRELSMQ---TYGVLSELLEGSNLTYGLVMGGSNRSAEKDKLAKGV-SIL 194
Query: 582 VGTPGRIL 605
V TPGR+L
Sbjct: 195 VATPGRLL 202
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 52.4 bits (120), Expect = 3e-07
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 9/160 (5%)
Frame = +3
Query: 213 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 392
F + L + + + G+ + +Q +P G DI+ A++G GKTA F+L + +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 393 L-------EPSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD 545
L E Y +++ TREL QI E +F+ Y + + + +GG+ + +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFA-YQTMMEIRPVYGGLAVGYN 672
Query: 546 EEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDE 665
+ ++ I+VGT GRI F+LDE
Sbjct: 673 KGQIEKGAT-IIVGTVGRIKHFCEEGTIKLDKCRFFVLDE 711
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 52.4 bits (120), Expect = 3e-07
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 9/160 (5%)
Frame = +3
Query: 213 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 392
F + L + + + G+ + +Q +P G DI+ A++G GKTA F+L + +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 393 L-------EPSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD 545
L E Y +++ TREL QI E +F+ Y + + + +GG+ + +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFA-YQTMMEIRPVYGGLAVGYN 672
Query: 546 EEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDE 665
+ ++ I+VGT GRI F+LDE
Sbjct: 673 KGQIEKGAT-IIVGTVGRIKHFCEEGTIKLDKCRFFVLDE 711
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 52.4 bits (120), Expect = 3e-07
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 9/160 (5%)
Frame = +3
Query: 213 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 392
F + L + + + G+ + +Q +P G DI+ A++G GKTA F+L + +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 393 L-------EPSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD 545
L E Y +++ TREL QI E +F+ Y + + + +GG+ + +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFA-YQTMMEIRPVYGGLAVGYN 672
Query: 546 EEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDE 665
+ ++ I+VGT GRI F+LDE
Sbjct: 673 KGQIEKGAT-IIVGTVGRIKHFCEEGTIKLDKCRFFVLDE 711
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 50.8 bits (116), Expect = 8e-07
Identities = 33/128 (25%), Positives = 69/128 (53%), Gaps = 3/128 (2%)
Frame = +3
Query: 228 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 407
L PE+L + D ++ ++VQ + D++ ++ +G GKT FVL ++ ++ ++
Sbjct: 17 LGPELLE-VFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMRMIQNAK 75
Query: 408 ---SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHI 578
+ + L++ +REL QI + F++ ++ + V GG + K+ ++ K +I
Sbjct: 76 LQPADIGALILSPSRELCSQIVSVIQPFAEKLN-LTVETVTGGQKVDKNIKMFKNKNVNI 134
Query: 579 VVGTPGRI 602
+V TPGR+
Sbjct: 135 LVATPGRL 142
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 48.4 bits (110), Expect = 5e-06
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 10/154 (6%)
Frame = +3
Query: 174 EVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGM 353
E++ + + + + + L P IL + + + +Q IPQ + G D+L QA++
Sbjct: 370 EIRNAEKDVRLTSWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSA 429
Query: 354 GKTAVFVLATLQQLEPSESHV----------YVLVMCHTRELAFQISKEYERFSKYMSGV 503
GKTA F L + ++ + L++ TRELA QI + + + + +
Sbjct: 430 GKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEALRTYCQ-NTDI 488
Query: 504 RVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRIL 605
V + +G + ++ C I++GT GRI+
Sbjct: 489 IVLLSYGQSDRARSLNEIRNGC-DILIGTCGRIM 521
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 47.2 bits (107), Expect = 1e-05
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 13/126 (10%)
Frame = +3
Query: 264 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESHV--------Y 419
G P+ +Q + IP A+ G D++ A +G GKT FVL + E + +
Sbjct: 209 GIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPF 268
Query: 420 VLVMCHTRELAFQ----ISKEYERFSKY-MSGVRVSVFFGGMPIQKDEEVLKTACPHIVV 584
L++ +RELA Q I + ++ K + +R + GG+PI + + ++ HIVV
Sbjct: 269 GLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGI-HIVV 327
Query: 585 GTPGRI 602
TPGR+
Sbjct: 328 ATPGRL 333
>Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical
protein K07A12.2 protein.
Length = 961
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 495 SGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPG 596
+G V GG P+ D E L + P++VV PG
Sbjct: 585 TGPLVRFATGGQPVASDIEQLIRSIPNMVVNVPG 618
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,943,013
Number of Sequences: 27780
Number of extensions: 318587
Number of successful extensions: 886
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -