Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22e21
         (101 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022179-1|AAY51573.1|  360|Drosophila melanogaster IP01239p pro...    26   8.0  
BT021942-1|AAX51647.1|  902|Drosophila melanogaster RE24732p pro...    26   8.0  
AY768537-1|AAV54101.1|  902|Drosophila melanogaster GluRIID prot...    26   8.0  
AY768536-1|AAV54100.1|  902|Drosophila melanogaster GluRIID prot...    26   8.0  
AY118881-1|AAM50741.1|  311|Drosophila melanogaster HL01355p pro...    26   8.0  
AJ251889-1|CAB64942.1|  902|Drosophila melanogaster ionotropic g...    26   8.0  
AJ251888-1|CAB64941.1|  902|Drosophila melanogaster ionotropic g...    26   8.0  
AE014297-2837|AAG22164.2|  902|Drosophila melanogaster CG18039-P...    26   8.0  
AE014296-1748|AAN11931.2|  479|Drosophila melanogaster CG32052-P...    26   8.0  
AE013599-2438|AAF57887.1|  338|Drosophila melanogaster CG17287-P...    26   8.0  

>BT022179-1|AAY51573.1|  360|Drosophila melanogaster IP01239p
           protein.
          Length = 360

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 101 FFFWLMLFVTLWAW 60
           FF+ L+LF+ LW W
Sbjct: 77  FFYHLLLFMFLWTW 90


>BT021942-1|AAX51647.1|  902|Drosophila melanogaster RE24732p
           protein.
          Length = 902

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -3

Query: 93  LVNAIRHFVGMVDWNRFNLFC-SSRPYLMIL 4
           + NA+   V   +W+RF +FC  S  YL IL
Sbjct: 142 IANALYDIVNQFEWSRF-IFCYESAEYLKIL 171


>AY768537-1|AAV54101.1|  902|Drosophila melanogaster GluRIID
           protein.
          Length = 902

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -3

Query: 93  LVNAIRHFVGMVDWNRFNLFC-SSRPYLMIL 4
           + NA+   V   +W+RF +FC  S  YL IL
Sbjct: 142 IANALYDIVNQFEWSRF-IFCYESAEYLKIL 171


>AY768536-1|AAV54100.1|  902|Drosophila melanogaster GluRIID
           protein.
          Length = 902

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -3

Query: 93  LVNAIRHFVGMVDWNRFNLFC-SSRPYLMIL 4
           + NA+   V   +W+RF +FC  S  YL IL
Sbjct: 142 IANALYDIVNQFEWSRF-IFCYESAEYLKIL 171


>AY118881-1|AAM50741.1|  311|Drosophila melanogaster HL01355p
           protein.
          Length = 311

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = -1

Query: 83  LFVTLWAWLIGIVSIYF 33
           L  T W+WL+G++++++
Sbjct: 276 LMPTSWSWLLGVLAVFY 292


>AJ251889-1|CAB64942.1|  902|Drosophila melanogaster ionotropic
           glutamate receptorsubunit IA protein.
          Length = 902

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -3

Query: 93  LVNAIRHFVGMVDWNRFNLFC-SSRPYLMIL 4
           + NA+   V   +W+RF +FC  S  YL IL
Sbjct: 142 IANALYDIVNQFEWSRF-IFCYESAEYLKIL 171


>AJ251888-1|CAB64941.1|  902|Drosophila melanogaster ionotropic
           glutamate receptorsubunit IA protein.
          Length = 902

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -3

Query: 93  LVNAIRHFVGMVDWNRFNLFC-SSRPYLMIL 4
           + NA+   V   +W+RF +FC  S  YL IL
Sbjct: 142 IANALYDIVNQFEWSRF-IFCYESAEYLKIL 171


>AE014297-2837|AAG22164.2|  902|Drosophila melanogaster CG18039-PA
           protein.
          Length = 902

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -3

Query: 93  LVNAIRHFVGMVDWNRFNLFC-SSRPYLMIL 4
           + NA+   V   +W+RF +FC  S  YL IL
Sbjct: 142 IANALYDIVNQFEWSRF-IFCYESAEYLKIL 171


>AE014296-1748|AAN11931.2|  479|Drosophila melanogaster CG32052-PA
           protein.
          Length = 479

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = -1

Query: 83  LFVTLWAWLIGIVSIYF 33
           L  T W+WL+G++++++
Sbjct: 444 LMPTSWSWLLGVLAVFY 460


>AE013599-2438|AAF57887.1|  338|Drosophila melanogaster CG17287-PA
           protein.
          Length = 338

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 101 FFFWLMLFVTLWAW 60
           FF+ L+LF+ LW W
Sbjct: 55  FFYHLLLFMFLWTW 68


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,350,237
Number of Sequences: 53049
Number of extensions: 38519
Number of successful extensions: 124
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 124
length of database: 24,988,368
effective HSP length: 15
effective length of database: 24,192,633
effective search space used: 435467394
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)