Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22e20
         (721 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74035-1|CAA98480.1|  204|Caenorhabditis elegans Hypothetical pr...   208   2e-54
AL117207-7|CAB60397.1|  211|Caenorhabditis elegans Hypothetical ...   102   2e-22
AF014940-5|AAB63937.1|  203|Caenorhabditis elegans Suppressor/en...    60   1e-09
AC199170-2|ABO33261.1|  167|Caenorhabditis elegans Hypothetical ...    48   9e-06
Z68116-10|CAI79231.1|  182|Caenorhabditis elegans Hypothetical p...    30   1.4  
Z35639-3|CAA84695.2|  780|Caenorhabditis elegans Hypothetical pr...    29   2.5  
U58083-1|AAC47120.1|  780|Caenorhabditis elegans CUL-1 protein.        29   2.5  
AF016427-8|AAB65355.1|  513|Caenorhabditis elegans Hypothetical ...    29   2.5  
AF067216-14|AAC17517.4|  729|Caenorhabditis elegans Hypothetical...    29   3.3  
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z46267-16|CAO78720.1|  576|Caenorhabditis elegans Hypothetical p...    28   5.8  
Z46267-4|CAD45594.1|  517|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z46267-3|CAA86421.3|  522|Caenorhabditis elegans Hypothetical pr...    28   5.8  
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re...    28   5.8  
Z46935-1|CAA87049.2|  519|Caenorhabditis elegans Hypothetical pr...    28   7.7  
AL117206-9|CAL22706.1|  292|Caenorhabditis elegans Hypothetical ...    28   7.7  

>Z74035-1|CAA98480.1|  204|Caenorhabditis elegans Hypothetical
           protein F47G9.1 protein.
          Length = 204

 Score =  208 bits (509), Expect = 2e-54
 Identities = 101/202 (50%), Positives = 143/202 (70%), Gaps = 2/202 (0%)
 Frame = +2

Query: 119 LVLLLSLIWHGTDAIMWSLAPNTHKCLKEELHANVLVAGEYDVTEIQGQRVDYIIKDSKG 298
           LV+ LS I     ++ + + P   KCLKEE+H NV+V GEY+ ++         + D++G
Sbjct: 4   LVIFLSAIVLA-HSLRFYVPPKEKKCLKEEIHKNVVVTGEYEFSQGIQYTGSIHVTDTRG 62

Query: 299 HILSQKDTVT--KGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKIGIEAKTYEG 472
           H L +++     KGKF+F  + YD+FE+C  +  P+   G   +VSL +K G+EAK Y+ 
Sbjct: 63  HTLYKRENFADLKGKFAFTADEYDIFEICIENHPPAGHPGEKREVSLILKHGVEAKNYDD 122

Query: 473 IGEAAKLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFFSIFSMACL 652
           I +A KLKP+EVEL+RLED++++I +DF  MR+REEEMR+TNESTN+RVL+ SIFSM CL
Sbjct: 123 IAKAEKLKPLEVELRRLEDMADSITKDFAFMRQREEEMRNTNESTNSRVLYLSIFSMLCL 182

Query: 653 LGLATWQVLYLRRFFKAKKLIE 718
           LGLA WQVL+LR +FK+KKLI+
Sbjct: 183 LGLAIWQVLFLRNYFKSKKLID 204


>AL117207-7|CAB60397.1|  211|Caenorhabditis elegans Hypothetical
           protein Y60A3A.9 protein.
          Length = 211

 Score =  102 bits (245), Expect = 2e-22
 Identities = 63/212 (29%), Positives = 105/212 (49%), Gaps = 10/212 (4%)
 Frame = +2

Query: 110 VQYLVLLLSLIWHGTDAIMWSLAPNTHKCLKEELHANVLVAGEYDVTEIQGQRVDY---- 277
           ++ L+ LLSL  +  D++ + +A    KC  EE+    +V G Y V         Y    
Sbjct: 1   MRLLIALLSLATYA-DSLYFHIAETEKKCFIEEIPDETMVTGNYKVQLYDPNTKGYGDYP 59

Query: 278 ------IIKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDI 439
                  +KD +  ++  K    +G+F+F +       +C  S   +   G   +V LDI
Sbjct: 60  NIGMHVEVKDPEDKVILSKLYTAEGRFTFTSNTPGEHVICIYSNSTAWFNGAQLRVHLDI 119

Query: 440 KIGIEAKTYEGIGEAAKLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDTNESTNNRV 619
           + G  A+ Y  I +  KL  +++ +++L D  + I ++    R REE  R T+ESTN+RV
Sbjct: 120 QAGDHAQDYAQIAQKDKLNELQLRIRQLLDQVDQITKEQNYQRYREERFRQTSESTNSRV 179

Query: 620 LFFSIFSMACLLGLATWQVLYLRRFFKAKKLI 715
            ++SI  +  L     WQ+ +LR FF+AKKL+
Sbjct: 180 FYWSIAQVVVLAITGAWQMRHLRGFFEAKKLV 211


>AF014940-5|AAB63937.1|  203|Caenorhabditis elegans
           Suppressor/enhancer of lin-12 protein9 protein.
          Length = 203

 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 41/181 (22%), Positives = 82/181 (45%), Gaps = 3/181 (1%)
 Frame = +2

Query: 182 NTHKCLKEELHANVLVAGEYDVTEIQGQRVDYIIKDSKGHILSQKDTVTKGKFSFVTENY 361
           N  +C  + L +   +   ++V E     +D  I       + + +  + GKF+F     
Sbjct: 26  NEEQCFFDRLTSGTKMGLMFEVAEGGFLDIDVKITGPDNKEIYKGERESSGKFTFAAHMD 85

Query: 362 DMFEVCFISKVPSERRGIPHQVSLDIKIGIEAKTYEGIG---EAAKLKPMEVELKRLEDL 532
            ++  CF +K+ +     P  V   ++I    +   G     +AA    +E  ++ L   
Sbjct: 86  GVYTYCFGNKMSTMT---PKAVMFTVEITEPHQQAPGAAANQDAADNAKLEEMVRELSSA 142

Query: 533 SEAIVQDFTLMRKREEEMRDTNESTNNRVLFFSIFSMACLLGLATWQVLYLRRFFKAKKL 712
             ++  +   M  RE   R+ NE+TN+RV+ ++ F    L+G+   Q+ YL+RFF+ + +
Sbjct: 143 LMSVKHEQEYMEVRERVHRNINENTNSRVVMWAAFEAFVLVGMTVGQIFYLKRFFEVRTM 202

Query: 713 I 715
           +
Sbjct: 203 V 203


>AC199170-2|ABO33261.1|  167|Caenorhabditis elegans Hypothetical
           protein T08D2.1 protein.
          Length = 167

 Score = 47.6 bits (108), Expect = 9e-06
 Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 10/138 (7%)
 Frame = +2

Query: 110 VQYLVLLLSLIWHGTDAIMWSLAPNTHKCLKEELHANVLVAGEYDVTEIQGQRVDY---- 277
           ++ L+ LLSL  +  D++ + +A    KC  EE+    +V G Y V         Y    
Sbjct: 1   MRLLIALLSLATYA-DSLYFHIAETEKKCFIEEIPDETMVTGNYKVQLYDPNTKGYGDYP 59

Query: 278 ------IIKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDI 439
                  +KD +  ++  K   ++G+F+F +       +C  S   +   G   +V LDI
Sbjct: 60  NIGMHVEVKDPEDKVILSKLYTSEGRFTFTSNTPGEHVICIYSNTTAWFNGAQLRVHLDI 119

Query: 440 KIGIEAKTYEGIGEAAKL 493
           + G  A+ Y  + E  KL
Sbjct: 120 QAGDHAQDYAQVEEERKL 137


>Z68116-10|CAI79231.1|  182|Caenorhabditis elegans Hypothetical
           protein F42F12.11 protein.
          Length = 182

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 13/50 (26%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
 Frame = +2

Query: 203 EELHANV-LVAGEYDVTEIQGQRVDYIIKDSKGHILSQKDTVTKGKFSFV 349
           E++  N+ L  G Y+V++  G +VD ++  ++ +++S++  + +GK + V
Sbjct: 73  EDIQPNIRLYDGHYEVSDGYGNQVDLVLTVAQRNLISERCFLLQGKIAHV 122


>Z35639-3|CAA84695.2|  780|Caenorhabditis elegans Hypothetical
           protein D2045.6 protein.
          Length = 780

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = +2

Query: 167 WSLAPNTHKCLKEELHANVLVAGEYDVTEIQGQRVDYIIKDSKGHILS 310
           W   P T   L ++L   + + G++   +  G+R+ ++   S+G I S
Sbjct: 550 WPTFPTTPITLPQQLSKTIEIFGQFYNEKFNGRRLTWVYSQSRGEITS 597


>U58083-1|AAC47120.1|  780|Caenorhabditis elegans CUL-1 protein.
          Length = 780

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = +2

Query: 167 WSLAPNTHKCLKEELHANVLVAGEYDVTEIQGQRVDYIIKDSKGHILS 310
           W   P T   L ++L   + + G++   +  G+R+ ++   S+G I S
Sbjct: 550 WPTFPTTPITLPQQLSKTIEIFGQFYNEKFNGRRLTWVYSQSRGEITS 597


>AF016427-8|AAB65355.1|  513|Caenorhabditis elegans Hypothetical
           protein F32D1.9 protein.
          Length = 513

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 19/63 (30%), Positives = 32/63 (50%)
 Frame = +1

Query: 403 KKRYSTSSKLRY*NRHRSKDL*RDRGGCKIEANGSGTEETRRPIRSYRSRFHTNEEKRRR 582
           ++R S   + R  + HR +D  RDR   +    G   E  R   R +RSR  + + +R+R
Sbjct: 391 ERRSSRRKRSRSRSPHRDRD--RDRRDRETRRRGE-RESDRTSSRRHRSRSASGDRRRKR 447

Query: 583 NER 591
           ++R
Sbjct: 448 DDR 450


>AF067216-14|AAC17517.4|  729|Caenorhabditis elegans Hypothetical
           protein C35E7.1 protein.
          Length = 729

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 22/95 (23%), Positives = 39/95 (41%)
 Frame = +2

Query: 140 IWHGTDAIMWSLAPNTHKCLKEELHANVLVAGEYDVTEIQGQRVDYIIKDSKGHILSQKD 319
           +W+G   I+     N  +   E++H   LV   YD        + +I       I+  KD
Sbjct: 244 VWNGRSEIIEQYVYNCEQGQFEQVHVPELV---YDPNHEVPMNILFIQMSKDRPIVIMKD 300

Query: 320 TVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQ 424
                  +FV + YD    CF++  P + + +P +
Sbjct: 301 E----DGNFVKQEYDSLIDCFVAISPKDAKILPRE 331


>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
            F29D11.1 protein.
          Length = 4753

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +2

Query: 350  TENYDMFEVCFISKVPSERRGIPHQVSLDIKIGIEAKTYEG 472
            T+  D   +CFI +     + +  Q  +D+KIG +   +EG
Sbjct: 3213 TDRSDESSLCFIDECSLAEKPLCEQKCMDMKIGYKCDCFEG 3253


>Z46267-16|CAO78720.1|  576|Caenorhabditis elegans Hypothetical
           protein F49E2.2c protein.
          Length = 576

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = +2

Query: 179 PNTHKCLKEELHANVLVAGEYDVTEIQGQRVDYIIKDSKGHILSQKDT 322
           P  HK   ++LH +  V    ++ E   ++VD  ++DS+ +  S   T
Sbjct: 269 PEDHKDWHQDLHEHAAVVAAEEIKENVEKKVDEAVQDSRSNSTSSVAT 316


>Z46267-4|CAD45594.1|  517|Caenorhabditis elegans Hypothetical
           protein F49E2.2b protein.
          Length = 517

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = +2

Query: 179 PNTHKCLKEELHANVLVAGEYDVTEIQGQRVDYIIKDSKGHILSQKDT 322
           P  HK   ++LH +  V    ++ E   ++VD  ++DS+ +  S   T
Sbjct: 215 PEDHKDWHQDLHEHAAVVAAEEIKENVEKKVDEAVQDSRSNSTSSVAT 262


>Z46267-3|CAA86421.3|  522|Caenorhabditis elegans Hypothetical
           protein F49E2.2a protein.
          Length = 522

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = +2

Query: 179 PNTHKCLKEELHANVLVAGEYDVTEIQGQRVDYIIKDSKGHILSQKDT 322
           P  HK   ++LH +  V    ++ E   ++VD  ++DS+ +  S   T
Sbjct: 215 PEDHKDWHQDLHEHAAVVAAEEIKENVEKKVDEAVQDSRSNSTSSVAT 262


>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
            protein protein.
          Length = 4753

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +2

Query: 350  TENYDMFEVCFISKVPSERRGIPHQVSLDIKIGIEAKTYEG 472
            T+  D   +CFI +     + +  Q  +D+KIG +   +EG
Sbjct: 3213 TDRSDESSLCFIDECSLAEKPLCEQKCMDMKIGYKCDCFEG 3253


>Z46935-1|CAA87049.2|  519|Caenorhabditis elegans Hypothetical
           protein M106.2 protein.
          Length = 519

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
 Frame = +2

Query: 461 TYEGIGEAAKLKPMEVELKRLEDLSEAI---VQDFTLMRKREEEM 586
           T+E   EA  L+ MEVE++  E L+E +   ++   +  KR +E+
Sbjct: 241 TFEQKKEALLLRKMEVEIRHTELLNEKLELEIRSIEVQEKRNQEL 285


>AL117206-9|CAL22706.1|  292|Caenorhabditis elegans Hypothetical
           protein Y67A10A.11 protein.
          Length = 292

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -2

Query: 264 CPCISVTSYSPATNTLACN 208
           CPCI VT+     NT ACN
Sbjct: 62  CPCIGVTTKLMICNTQACN 80


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,232,930
Number of Sequences: 27780
Number of extensions: 337288
Number of successful extensions: 976
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)