Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte22e17
(490 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 28 3.2
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 28 3.2
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 28 3.2
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 28 3.2
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 28 3.2
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 28 3.2
U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocyto... 27 5.5
U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocyto... 27 5.5
AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein. 27 5.5
AC006610-2|AAK85448.1| 445|Caenorhabditis elegans Hypothetical ... 27 5.5
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 27 7.3
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 27 7.3
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 27 7.3
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 28.3 bits (60), Expect = 3.2
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +3
Query: 123 NSVDXXIKWMKDSKII---DEVKASEEKARKLFXGVPDIXNIDIXKLKEVINKMAAEXKK 293
N IKW K+ K I D+ + + K +PD + D + K V+
Sbjct: 4515 NKKPKEIKWYKNGKEITPSDKAQPGSDGDNKPQLVIPDAGDDDAAEYKVVLTDEDGNTAD 4574
Query: 294 NVEELTTMLEKQPPKVLDALQ 356
+ LT L + PK++ L+
Sbjct: 4575 SSCALTVKLPAKEPKIIKGLE 4595
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 28.3 bits (60), Expect = 3.2
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +3
Query: 123 NSVDXXIKWMKDSKII---DEVKASEEKARKLFXGVPDIXNIDIXKLKEVINKMAAEXKK 293
N IKW K+ K I D+ + + K +PD + D + K V+
Sbjct: 3875 NKKPKEIKWYKNGKEITPSDKAQPGSDGDNKPQLVIPDAGDDDAAEYKVVLTDEDGNTAD 3934
Query: 294 NVEELTTMLEKQPPKVLDALQ 356
+ LT L + PK++ L+
Sbjct: 3935 SSCALTVKLPAKEPKIIKGLE 3955
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 28.3 bits (60), Expect = 3.2
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +3
Query: 123 NSVDXXIKWMKDSKII---DEVKASEEKARKLFXGVPDIXNIDIXKLKEVINKMAAEXKK 293
N IKW K+ K I D+ + + K +PD + D + K V+
Sbjct: 4515 NKKPKEIKWYKNGKEITPSDKAQPGSDGDNKPQLVIPDAGDDDAAEYKVVLTDEDGNTAD 4574
Query: 294 NVEELTTMLEKQPPKVLDALQ 356
+ LT L + PK++ L+
Sbjct: 4575 SSCALTVKLPAKEPKIIKGLE 4595
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 28.3 bits (60), Expect = 3.2
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +3
Query: 123 NSVDXXIKWMKDSKII---DEVKASEEKARKLFXGVPDIXNIDIXKLKEVINKMAAEXKK 293
N IKW K+ K I D+ + + K +PD + D + K V+
Sbjct: 4515 NKKPKEIKWYKNGKEITPSDKAQPGSDGDNKPQLVIPDAGDDDAAEYKVVLTDEDGNTAD 4574
Query: 294 NVEELTTMLEKQPPKVLDALQ 356
+ LT L + PK++ L+
Sbjct: 4575 SSCALTVKLPAKEPKIIKGLE 4595
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 28.3 bits (60), Expect = 3.2
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +3
Query: 123 NSVDXXIKWMKDSKII---DEVKASEEKARKLFXGVPDIXNIDIXKLKEVINKMAAEXKK 293
N IKW K+ K I D+ + + K +PD + D + K V+
Sbjct: 3875 NKKPKEIKWYKNGKEITPSDKAQPGSDGDNKPQLVIPDAGDDDAAEYKVVLTDEDGNTAD 3934
Query: 294 NVEELTTMLEKQPPKVLDALQ 356
+ LT L + PK++ L+
Sbjct: 3935 SSCALTVKLPAKEPKIIKGLE 3955
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 28.3 bits (60), Expect = 3.2
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +3
Query: 123 NSVDXXIKWMKDSKII---DEVKASEEKARKLFXGVPDIXNIDIXKLKEVINKMAAEXKK 293
N IKW K+ K I D+ + + K +PD + D + K V+
Sbjct: 4515 NKKPKEIKWYKNGKEITPSDKAQPGSDGDNKPQLVIPDAGDDDAAEYKVVLTDEDGNTAD 4574
Query: 294 NVEELTTMLEKQPPKVLDALQ 356
+ LT L + PK++ L+
Sbjct: 4575 SSCALTVKLPAKEPKIIKGLE 4595
>U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform b
protein.
Length = 681
Score = 27.5 bits (58), Expect = 5.5
Identities = 17/77 (22%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 102 KLQXDGKNSVDXXIKWM-KDSKIIDEVKASEEKARKLFXGVPDIXNIDIXKLKEVINKMA 278
K Q + K + ++ + +D+K ++ KA++EK + ++ + ++ I K
Sbjct: 499 KAQKETKEDTEKRMQQIDEDAKNAEDCKANDEKEMEELKKEIEMLDNQFKTVRGEIVKET 558
Query: 279 AEXKKNVEELTTMLEKQ 329
++ ++ V ELTT+ K+
Sbjct: 559 SQREQKVAELTTLERKE 575
>U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform a
protein.
Length = 751
Score = 27.5 bits (58), Expect = 5.5
Identities = 17/77 (22%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 102 KLQXDGKNSVDXXIKWM-KDSKIIDEVKASEEKARKLFXGVPDIXNIDIXKLKEVINKMA 278
K Q + K + ++ + +D+K ++ KA++EK + ++ + ++ I K
Sbjct: 499 KAQKETKEDTEKRMQQIDEDAKNAEDCKANDEKEMEELKKEIEMLDNQFKTVRGEIVKET 558
Query: 279 AEXKKNVEELTTMLEKQ 329
++ ++ V ELTT+ K+
Sbjct: 559 SQREQKVAELTTLERKE 575
>AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein.
Length = 796
Score = 27.5 bits (58), Expect = 5.5
Identities = 17/77 (22%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 102 KLQXDGKNSVDXXIKWM-KDSKIIDEVKASEEKARKLFXGVPDIXNIDIXKLKEVINKMA 278
K Q + K + ++ + +D+K ++ KA++EK + ++ + ++ I K
Sbjct: 544 KAQKETKEDTEKRMQQIDEDAKNAEDCKANDEKEMEELKKEIEMLDNQFKTVRGEIVKET 603
Query: 279 AEXKKNVEELTTMLEKQ 329
++ ++ V ELTT+ K+
Sbjct: 604 SQREQKVAELTTLERKE 620
>AC006610-2|AAK85448.1| 445|Caenorhabditis elegans Hypothetical
protein C30F12.2 protein.
Length = 445
Score = 27.5 bits (58), Expect = 5.5
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = +3
Query: 84 MDQFFEKLQXDGKNSVDXXIKWMKDSKIIDEVKASEEKARKLFXGVPDI 230
MD FFE D K V K + E+K KAR F VP I
Sbjct: 107 MDLFFENCPIDKKRRVHFNDFMQNVHKRMHELKMQSNKARGKFDPVPVI 155
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 27.1 bits (57), Expect = 7.3
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +3
Query: 255 KEVINKMAAEXKKNVEELTTMLEKQPPKVLDALQAGASA 371
+EV+ +M A+ +K +EEL +++ + + A +A +SA
Sbjct: 1201 EEVVEEMKAQNQKKIEELNETIDQLKRQKISADKAKSSA 1239
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 27.1 bits (57), Expect = 7.3
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +3
Query: 255 KEVINKMAAEXKKNVEELTTMLEKQPPKVLDALQAGASA 371
+EV+ +M A+ +K +EEL +++ + + A +A +SA
Sbjct: 1201 EEVVEEMKAQNQKKIEELNETIDQLKRQKISADKAKSSA 1239
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 27.1 bits (57), Expect = 7.3
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +3
Query: 255 KEVINKMAAEXKKNVEELTTMLEKQPPKVLDALQAGASA 371
+EV+ +M A+ +K +EEL +++ + + A +A +SA
Sbjct: 1201 EEVVEEMKAQNQKKIEELNETIDQLKRQKISADKAKSSA 1239
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,595,907
Number of Sequences: 27780
Number of extensions: 111349
Number of successful extensions: 355
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 355
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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