Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22e16
         (702 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   1.6  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   2.1  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    23   2.1  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   2.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   2.8  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   4.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   6.5  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   8.6  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +1

Query: 280 KSIVPALIGRNGSNIKDLQKKSGAQIHFKKFTDQDYDVCVVRGRAD 417
           KS + +L+       KDL KK+ +  H    T  +YD  + RG  D
Sbjct: 737 KSTIQSLMKLKSPEWKDLAKKARSVNHL--LTHHEYDYELSRGYID 780


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
 Frame = -1

Query: 402 DYTHIIVLVGELFEMD-LCTRFLLKVLNVGAIATNQSWNNAFRNMNFNCIYFSNLDC--L 232
           DYT   + +GE+   D +  +   KV+N+            + ++    +   N+D   L
Sbjct: 416 DYTPSSLELGEVAVHDPVFYQLYKKVMNLYQQYQQSLPVYQYNDLILPGVTIQNVDVSQL 475

Query: 231 VIVF--FFISLEDIVGHKCCYSHEGQAQS 151
           V +F  F++ L+ + GH+     E Q QS
Sbjct: 476 VTLFTDFYVDLDAVTGHQSQQQQEEQTQS 504


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 112 QIMSLNTKLALPIALGLSLVTVTAFVAYYVL 204
           +IMS+N   A    LGL +VTV   + ++ L
Sbjct: 298 KIMSINNLTATAQMLGLYMVTVILGLLFHAL 328


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 93  RKVKLRTNNVIEHKISFAHCFGL 161
           +K + +TNN++   +SF    GL
Sbjct: 279 QKTESKTNNIVVEGVSFGQSVGL 301


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -1

Query: 339 LLKVLNVGAIATNQSWNNAFRNMN 268
           LLK L++G    +  +N +FRN++
Sbjct: 455 LLKTLDLGENRISNFYNGSFRNLD 478


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +1

Query: 403 RGRADTTQLAETLIHDFIKQQPTIMSESITVP 498
           +G      LAE L+ +  K+   +M+ +++VP
Sbjct: 679 KGMLSEKILAEPLVKEHFKKALELMNRAVSVP 710


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 69   KPIYPTLIRKVKLRTNNVIEH 131
            KPI P   R +++ TN++  H
Sbjct: 1460 KPIIPEAARFIEVATNSITLH 1480


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/33 (24%), Positives = 19/33 (57%)
 Frame = +1

Query: 133 KLALPIALGLSLVTVTAFVAYYVLKRDEEENDN 231
           KLA P A+ +  +T    +  Y++ +++ + D+
Sbjct: 274 KLACPPAIFIFDLTTDTLIRKYIIPKEQVKEDS 306


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,577
Number of Sequences: 438
Number of extensions: 4002
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)