Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte22e15
         (547 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0364 + 28304743-28304814,28305021-28305197,28307309-283074...    35   0.037
11_06_0223 - 21419128-21419397,21419493-21419747,21420243-214204...    30   1.0  
10_02_0049 - 4580417-4580602,4580955-4581833                           27   7.4  
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322...    27   9.8  
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287...    27   9.8  

>02_05_0364 +
           28304743-28304814,28305021-28305197,28307309-28307431,
           28307644-28308043,28308129-28308242,28308359-28308454,
           28308598-28308791
          Length = 391

 Score = 35.1 bits (77), Expect = 0.037
 Identities = 20/74 (27%), Positives = 37/74 (50%)
 Frame = -3

Query: 518 LAHKXGTNQMKDMGRRGRTVRIETDRVHKAHSMACKTTGMVHSTGNISACKARMVQNTVR 339
           L  K      +  GR+   +R++T ++H A S+A   T +    GN  + ++    NT+ 
Sbjct: 134 LKSKLANMVQRGCGRKREDIRLQTAQMHAALSVARLATAVARMVGNCQS-ESTNANNTIM 192

Query: 338 TVHMGRYKDRKAHM 297
           T  +G+ + RK H+
Sbjct: 193 TA-IGKDEHRKMHV 205


>11_06_0223 - 21419128-21419397,21419493-21419747,21420243-21420414,
            21420530-21420757,21420916-21421049,21421309-21421392,
            21421554-21421760,21421871-21422203,21422343-21422449,
            21422823-21422988,21423127-21423230,21423347-21423507,
            21423595-21424495,21424642-21424732,21424837-21425127,
            21425491-21425575,21425665-21425747,21427653-21427773,
            21427785-21428260
          Length = 1422

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +1

Query: 409  VLQAILWALWTLSVSMRTVRPLRPMSFIWFVPXLWANAALW 531
            +L + +  LW L      VRPL P+ + W+    WAN   W
Sbjct: 1313 ILISFVLPLWNLFAGFLVVRPLIPIWWRWY---YWANPVSW 1350


>10_02_0049 - 4580417-4580602,4580955-4581833
          Length = 354

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 15/26 (57%), Positives = 15/26 (57%)
 Frame = +3

Query: 423 TVGLVDPVRLDAXRAAPAAHVLHLVR 500
           TVGL  P RLDA RA     V  LVR
Sbjct: 131 TVGLFSPRRLDAMRALLEEKVAELVR 156


>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
            3220080-3223195,3223303-3223561,3223665-3223951,
            3224029-3224364,3224463-3224604,3224690-3224910,
            3224990-3225151,3225242-3225400,3225488-3225787,
            3226306-3226569,3227370-3227453
          Length = 1855

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +1

Query: 394  WTMPVVLQAILW-ALWTLSVSMRTVRPLRPMSFI 492
            W MPV L+ ++W A  T  + +R    + PM  +
Sbjct: 973  WPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIV 1006


>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
            2879715-2879973,2880060-2880346,2880423-2880758,
            2880862-2881003,2881077-2881297,2881379-2881540,
            2881617-2881775,2881860-2882159,2882834-2883097,
            2883133-2883243,2883902-2883988
          Length = 1871

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +1

Query: 394  WTMPVVLQAILW-ALWTLSVSMRTVRPLRPMSFI 492
            W MPV L+ ++W A  T  + +R    + PM  +
Sbjct: 1011 WPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIV 1044


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,625,483
Number of Sequences: 37544
Number of extensions: 121635
Number of successful extensions: 367
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 366
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1222086348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)